RNA–Protein interactions for RNA: ENST00000580972.1

RNU4ATAC-201, Transcript of RNA, U4atac small nuclear (U12-dependent splicing), humanhuman

BASIC

Gene RNU4ATAC, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4ATAC-201ENST00000580972 EEF2KO00418 725 aaKnown RBP6.38□□□□□ -1.39
RNU4ATAC-201ENST00000580972 TRDMT1O14717 391 aaKnown RBP6.38□□□□□ -1.39
RNU4ATAC-201ENST00000580972 DAPK3O43293 454 aa6.38□□□□□ -1.39
RNU4ATAC-201ENST00000580972 COCHO43405 550 aa6.38□□□□□ -1.39
RNU4ATAC-201ENST00000580972 TLR5O60602 858 aa6.38□□□□□ -1.39
RNU4ATAC-201ENST00000580972 CLASP2O75122 1294 aaKnown RBP6.38□□□□□ -1.39
RNU4ATAC-201ENST00000580972 PAGE1O75459 146 aa6.38□□□□□ -1.39
RNU4ATAC-201ENST00000580972 RTN3O95197 1032 aaPredicted RBP6.38□□□□□ -1.39
RNU4ATAC-201ENST00000580972 C8AP07357 584 aa6.38□□□□□ -1.39
RNU4ATAC-201ENST00000580972 ZDHHC11BP0C7U3 371 aa6.38□□□□□ -1.39
RNU4ATAC-201ENST00000580972 IRF1P10914 325 aa6.38□□□□□ -1.39
RNU4ATAC-201ENST00000580972 ATF2P15336 505 aa6.38□□□□□ -1.39
RNU4ATAC-201ENST00000580972 VAV1P15498 845 aa6.38□□□□□ -1.39
RNU4ATAC-201ENST00000580972 KLRC2P26717 231 aa6.38□□□□□ -1.39
RNU4ATAC-201ENST00000580972 ECHS1P30084 290 aa6.38□□□□□ -1.39
RNU4ATAC-201ENST00000580972 CCR2P41597 374 aa6.38□□□□□ -1.39
RNU4ATAC-201ENST00000580972 VCPP55072 806 aaKnown RBP6.38□□□□□ -1.39
RNU4ATAC-201ENST00000580972 NTHL1P78549 312 aa6.38□□□□□ -1.39
RNU4ATAC-201ENST00000580972 DR1Q01658 176 aa6.38□□□□□ -1.39
RNU4ATAC-201ENST00000580972 SEMA3BQ13214 749 aa6.38□□□□□ -1.39
RNU4ATAC-201ENST00000580972 EIF4EBP2Q13542 120 aaPredicted RBP6.38□□□□□ -1.39
RNU4ATAC-201ENST00000580972 DPYSQ14117 519 aa6.38□□□□□ -1.39
RNU4ATAC-201ENST00000580972 ACAP1Q15027 740 aa6.38□□□□□ -1.39
RNU4ATAC-201ENST00000580972 DPYSL2Q16555 572 aa6.38□□□□□ -1.39
RNU4ATAC-201ENST00000580972 BOLA3Q53S33 107 aa6.38□□□□□ -1.39
RNU4ATAC-201ENST00000580972 ODF2Q5BJF6 829 aa6.38□□□□□ -1.39
RNU4ATAC-201ENST00000580972 TFDP3Q5H9I0 405 aa6.38□□□□□ -1.39
RNU4ATAC-201ENST00000580972 EFHC2Q5JST6 749 aa6.38□□□□□ -1.39
RNU4ATAC-201ENST00000580972 STXBP5Q5T5C0 1151 aa6.38□□□□□ -1.39
RNU4ATAC-201ENST00000580972 PIK3R6Q5UE93 754 aa6.38□□□□□ -1.39
RNU4ATAC-201ENST00000580972 TPGS2Q68CL5 300 aa6.38□□□□□ -1.39
RNU4ATAC-201ENST00000580972 NCBP2-AS2Q69YL0 99 aa6.38□□□□□ -1.39
RNU4ATAC-201ENST00000580972 NADSYN1Q6IA69 706 aa6.38□□□□□ -1.39
RNU4ATAC-201ENST00000580972 MSANTD2Q6P1R3 559 aa6.38□□□□□ -1.39
RNU4ATAC-201ENST00000580972 CCDC137Q6PK04 289 aaKnown RBP6.38□□□□□ -1.39
RNU4ATAC-201ENST00000580972 POTEHQ6S545 545 aa6.38□□□□□ -1.39
RNU4ATAC-201ENST00000580972 ZDHHC24Q6UX98 284 aa6.38□□□□□ -1.39
RNU4ATAC-201ENST00000580972 DNAJB7Q7Z6W7 309 aaPredicted RBP6.38□□□□□ -1.39
RNU4ATAC-201ENST00000580972 RBM23Q86U06 439 aaKnown RBP6.38□□□□□ -1.39
RNU4ATAC-201ENST00000580972 MON1AQ86VX9 555 aa6.38□□□□□ -1.39
RNU4ATAC-201ENST00000580972 TMC8Q8IU68 726 aa6.38□□□□□ -1.39
RNU4ATAC-201ENST00000580972 UNC45BQ8IWX7 931 aa6.38□□□□□ -1.39
RNU4ATAC-201ENST00000580972 TNS4Q8IZW8 715 aa6.38□□□□□ -1.39
RNU4ATAC-201ENST00000580972 NPWQ8N729 165 aa6.38□□□□□ -1.39
RNU4ATAC-201ENST00000580972 C12orf76Q8N812 135 aaPredicted RBP6.38□□□□□ -1.39
RNU4ATAC-201ENST00000580972 C12orf50Q8NA57 414 aaPredicted RBP6.38□□□□□ -1.39
RNU4ATAC-201ENST00000580972 KREMEN2Q8NCW0 462 aa6.38□□□□□ -1.39
RNU4ATAC-201ENST00000580972 VN1R2Q8NFZ6 395 aa6.38□□□□□ -1.39
RNU4ATAC-201ENST00000580972 SLC35B2Q8TB61 432 aa6.38□□□□□ -1.39
RNU4ATAC-201ENST00000580972 FAM71BQ8TC56 605 aa6.38□□□□□ -1.39
RNU4ATAC-201ENST00000580972 MICAL1Q8TDZ2 1067 aa6.38□□□□□ -1.39
RNU4ATAC-201ENST00000580972 C2orf15Q8WU43 125 aaKnown RBP6.38□□□□□ -1.39
RNU4ATAC-201ENST00000580972 IFT81Q8WYA0 676 aa6.38□□□□□ -1.39
RNU4ATAC-201ENST00000580972 ARNTL2Q8WYA1 636 aa6.38□□□□□ -1.39
RNU4ATAC-201ENST00000580972 FAF2Q96CS3 445 aa6.38□□□□□ -1.39
RNU4ATAC-201ENST00000580972 TCEAL4Q96EI5 215 aa6.38□□□□□ -1.39
RNU4ATAC-201ENST00000580972 P2RY11Q96G91 374 aa6.38□□□□□ -1.39
RNU4ATAC-201ENST00000580972 RPGRIP1Q96KN7 1286 aa6.38□□□□□ -1.39
RNU4ATAC-201ENST00000580972 CCDC114Q96M63 670 aa6.38□□□□□ -1.39
RNU4ATAC-201ENST00000580972 ZNF512Q96ME7 567 aaPredicted RBP6.38□□□□□ -1.39
RNU4ATAC-201ENST00000580972 PWWP2AQ96N64 755 aa6.38□□□□□ -1.39
RNU4ATAC-201ENST00000580972 SLC22A12Q96S37 553 aa6.38□□□□□ -1.39
RNU4ATAC-201ENST00000580972 GDF15Q99988 308 aa6.38□□□□□ -1.39
RNU4ATAC-201ENST00000580972 PBX4Q9BYU1 374 aa6.38□□□□□ -1.39
RNU4ATAC-201ENST00000580972 UBE2OQ9C0C9 1292 aaKnown RBP6.38□□□□□ -1.39
RNU4ATAC-201ENST00000580972 SIK2Q9H0K1 926 aa6.38□□□□□ -1.39
RNU4ATAC-201ENST00000580972 SMG9Q9H0W8 520 aaKnown RBP6.38□□□□□ -1.39
RNU4ATAC-201ENST00000580972 LRRC19Q9H756 370 aa6.38□□□□□ -1.39
RNU4ATAC-201ENST00000580972 TRPC7Q9HCX4 862 aa6.38□□□□□ -1.39
RNU4ATAC-201ENST00000580972 GDF3Q9NR23 364 aa6.38□□□□□ -1.39
RNU4ATAC-201ENST00000580972 ARHGEF4Q9NR80 690 aa6.38□□□□□ -1.39
RNU4ATAC-201ENST00000580972 GKN1Q9NS71 199 aa6.38□□□□□ -1.39
RNU4ATAC-201ENST00000580972 ABCC13Q9NSE7 274 aa6.38□□□□□ -1.39
RNU4ATAC-201ENST00000580972 SMPD4Q9NXE4 827 aa6.38□□□□□ -1.39
RNU4ATAC-201ENST00000580972 GRHL1Q9NZI5 618 aa6.38□□□□□ -1.39
RNU4ATAC-201ENST00000580972 MARCH2Q9P0N8 246 aa6.38□□□□□ -1.39
RNU4ATAC-201ENST00000580972 STIM2Q9P246 746 aa6.38□□□□□ -1.39
RNU4ATAC-201ENST00000580972 FNIP2Q9P278 1114 aa6.38□□□□□ -1.39
RNU4ATAC-201ENST00000580972 LCMT1Q9UIC8 334 aa6.38□□□□□ -1.39
RNU4ATAC-201ENST00000580972 RAB21Q9UL25 225 aa6.38□□□□□ -1.39
RNU4ATAC-201ENST00000580972 NFU1Q9UMS0 254 aa6.38□□□□□ -1.39
RNU4ATAC-201ENST00000580972 NEU2Q9Y3R4 380 aa6.38□□□□□ -1.39
RNU4ATAC-201ENST00000580972 DNAH12Q6ZR08 3092 aa6.38□□□□□ -1.39
RNU4ATAC-201ENST00000580972 TTC3P53804 2025 aa6.37□□□□□ -1.39
RNU4ATAC-201ENST00000580972 KCNU1A8MYU2 1149 aa6.37□□□□□ -1.39
RNU4ATAC-201ENST00000580972 H3BRJ5 948 aa6.37□□□□□ -1.39
RNU4ATAC-201ENST00000580972 CCDC188H7C350 402 aa6.37□□□□□ -1.39
RNU4ATAC-201ENST00000580972 APOL1O14791 398 aa6.37□□□□□ -1.39
RNU4ATAC-201ENST00000580972 DCLK1O15075 740 aa6.37□□□□□ -1.39
RNU4ATAC-201ENST00000580972 SASH3O75995 380 aa6.37□□□□□ -1.39
RNU4ATAC-201ENST00000580972 LRIG2O94898 1065 aa6.37□□□□□ -1.39
RNU4ATAC-201ENST00000580972 ECEL1O95672 775 aa6.37□□□□□ -1.39
RNU4ATAC-201ENST00000580972 SRGAP2BP0DMP2 458 aa6.37□□□□□ -1.39
RNU4ATAC-201ENST00000580972 MYL4P12829 197 aa6.37□□□□□ -1.39
RNU4ATAC-201ENST00000580972 CHRNA3P32297 505 aa6.37□□□□□ -1.39
RNU4ATAC-201ENST00000580972 ELF1P32519 619 aa6.37□□□□□ -1.39
RNU4ATAC-201ENST00000580972 RPL21P46778 160 aaKnown RBP6.37□□□□□ -1.39
RNU4ATAC-201ENST00000580972 ALDH1A3P47895 512 aa6.37□□□□□ -1.39
RNU4ATAC-201ENST00000580972 FNTAP49354 379 aa6.37□□□□□ -1.39
RNU4ATAC-201ENST00000580972 TUFMP49411 452 aaKnown RBP6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms