RNA–Protein interactions for RNA: ENST00000578896.1

GGA3-207, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 439 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-207ENST00000578896 PENKP01210 267 aaPredicted RBP9.36□□□□□ -0.91
GGA3-207ENST00000578896 EPB41P11171 864 aaKnown RBP9.36□□□□□ -0.91
GGA3-207ENST00000578896 CEACAM1P13688 526 aa9.36□□□□□ -0.91
GGA3-207ENST00000578896 HLA-EP13747 358 aa9.36□□□□□ -0.91
GGA3-207ENST00000578896 CD19P15391 556 aa9.36□□□□□ -0.91
GGA3-207ENST00000578896 CSRP1P21291 193 aaKnown RBP9.36□□□□□ -0.91
GGA3-207ENST00000578896 GTF2H1P32780 548 aa9.36□□□□□ -0.91
GGA3-207ENST00000578896 RGS7P49802 495 aa9.36□□□□□ -0.91
GGA3-207ENST00000578896 ATXN3P54252 364 aaPredicted RBP9.36□□□□□ -0.91
GGA3-207ENST00000578896 COG7P83436 770 aa9.36□□□□□ -0.91
GGA3-207ENST00000578896 GFPT1Q06210 699 aaPredicted RBP9.36□□□□□ -0.91
GGA3-207ENST00000578896 FUT11Q495W5 492 aa9.36□□□□□ -0.91
GGA3-207ENST00000578896 TMEM215Q68D42 235 aa9.36□□□□□ -0.91
GGA3-207ENST00000578896 ARHGAP17Q68EM7 881 aa9.36□□□□□ -0.91
GGA3-207ENST00000578896 SLC36A4Q6YBV0 504 aa9.36□□□□□ -0.91
GGA3-207ENST00000578896 BHLHA9Q7RTU4 235 aa9.36□□□□□ -0.91
GGA3-207ENST00000578896 MINDY1Q8N5J2 469 aa9.36□□□□□ -0.91
GGA3-207ENST00000578896 ZNF366Q8N895 744 aa9.36□□□□□ -0.91
GGA3-207ENST00000578896 ANKRD52Q8NB46 1076 aa9.36□□□□□ -0.91
GGA3-207ENST00000578896 DDI1Q8WTU0 396 aa9.36□□□□□ -0.91
GGA3-207ENST00000578896 PIWIL1Q96J94 861 aaKnown RBP9.36□□□□□ -0.91
GGA3-207ENST00000578896 CAMK1GQ96NX5 476 aa9.36□□□□□ -0.91
GGA3-207ENST00000578896 CIPCQ9C0C6 399 aa9.36□□□□□ -0.91
GGA3-207ENST00000578896 SCAND2PQ9GZW5 306 aaPredicted RBP9.36□□□□□ -0.91
GGA3-207ENST00000578896 MKRN2Q9H000 416 aaKnown RBP9.36□□□□□ -0.91
GGA3-207ENST00000578896 CAPN10Q9HC96 672 aa9.36□□□□□ -0.91
GGA3-207ENST00000578896 CLIC5Q9NZA1 410 aa9.36□□□□□ -0.91
GGA3-207ENST00000578896 THAP10Q9P2Z0 257 aaPredicted RBP9.36□□□□□ -0.91
GGA3-207ENST00000578896 TSPAN16Q9UKR8 245 aa9.36□□□□□ -0.91
GGA3-207ENST00000578896 WASF3Q9UPY6 502 aa9.36□□□□□ -0.91
GGA3-207ENST00000578896 APC2O95996 2303 aa9.36□□□□□ -0.91
GGA3-207ENST00000578896 GOLGA6L7A0A1B0GV03 622 aa9.35□□□□□ -0.91
GGA3-207ENST00000578896 KCNJ18B7U540 433 aa9.35□□□□□ -0.91
GGA3-207ENST00000578896 LAMA5O15230 3695 aa9.35□□□□□ -0.91
GGA3-207ENST00000578896 MSI1O43347 362 aaKnown RBP9.35□□□□□ -0.91
GGA3-207ENST00000578896 ZNF217O75362 1048 aa9.35□□□□□ -0.91
GGA3-207ENST00000578896 GABBR2O75899 941 aa9.35□□□□□ -0.91
GGA3-207ENST00000578896 ZBED1O96006 694 aa9.35□□□□□ -0.91
GGA3-207ENST00000578896 PROS1P07225 676 aa9.35□□□□□ -0.91
GGA3-207ENST00000578896 SERPINF2P08697 491 aa9.35□□□□□ -0.91
GGA3-207ENST00000578896 LCP1P13796 627 aa9.35□□□□□ -0.91
GGA3-207ENST00000578896 PRKCHP24723 683 aa9.35□□□□□ -0.91
GGA3-207ENST00000578896 ATRXP46100 2492 aa9.35□□□□□ -0.91
GGA3-207ENST00000578896 PSEN1P49768 467 aa9.35□□□□□ -0.91
GGA3-207ENST00000578896 SIM1P81133 766 aaPredicted RBP9.35□□□□□ -0.91
GGA3-207ENST00000578896 ADIGQ0VDE8 80 aa9.35□□□□□ -0.91
GGA3-207ENST00000578896 SEMA3BQ13214 749 aa9.35□□□□□ -0.91
GGA3-207ENST00000578896 CUL2Q13617 745 aa9.35□□□□□ -0.91
GGA3-207ENST00000578896 ZNF234Q14588 700 aa9.35□□□□□ -0.91
GGA3-207ENST00000578896 EDRF1Q3B7T1 1238 aa9.35□□□□□ -0.91
GGA3-207ENST00000578896 PLEKHG6Q3KR16 790 aa9.35□□□□□ -0.91
GGA3-207ENST00000578896 RAB41Q5JT25 222 aa9.35□□□□□ -0.91
GGA3-207ENST00000578896 SPDYCQ5MJ68 293 aa9.35□□□□□ -0.91
GGA3-207ENST00000578896 PEAR1Q5VY43 1037 aaPredicted RBP9.35□□□□□ -0.91
GGA3-207ENST00000578896 UNQ6494/PRO21346Q6UXR6 183 aa9.35□□□□□ -0.91
GGA3-207ENST00000578896 PIP4P1Q86T03 277 aa9.35□□□□□ -0.91
GGA3-207ENST00000578896 TADA2BQ86TJ2 420 aa9.35□□□□□ -0.91
GGA3-207ENST00000578896 FAM124AQ86V42 546 aa9.35□□□□□ -0.91
GGA3-207ENST00000578896 FMNL3Q8IVF7 1028 aa9.35□□□□□ -0.91
GGA3-207ENST00000578896 FMR1NBQ8N0W7 255 aaPredicted RBP9.35□□□□□ -0.91
GGA3-207ENST00000578896 HDDC3Q8N4P3 179 aa9.35□□□□□ -0.91
GGA3-207ENST00000578896 CYB5D2Q8WUJ1 264 aa9.35□□□□□ -0.91
GGA3-207ENST00000578896 TFAP2BQ92481 460 aa9.35□□□□□ -0.91
GGA3-207ENST00000578896 KAT5Q92993 513 aa9.35□□□□□ -0.91
GGA3-207ENST00000578896 TOE1Q96GM8 510 aaKnown RBP9.35□□□□□ -0.91
GGA3-207ENST00000578896 ZNF419Q96HQ0 510 aaPredicted RBP9.35□□□□□ -0.91
GGA3-207ENST00000578896 GPR174Q9BXC1 333 aa9.35□□□□□ -0.91
GGA3-207ENST00000578896 UBXN6Q9BZV1 441 aa9.35□□□□□ -0.91
GGA3-207ENST00000578896 DCLK3Q9C098 648 aa9.35□□□□□ -0.91
GGA3-207ENST00000578896 MIR1-1HGQ9H1L0 117 aa9.35□□□□□ -0.91
GGA3-207ENST00000578896 PRDM16Q9HAZ2 1276 aa9.35□□□□□ -0.91
GGA3-207ENST00000578896 LRRC4Q9HBW1 653 aa9.35□□□□□ -0.91
GGA3-207ENST00000578896 ELOVL2Q9NXB9 296 aa9.35□□□□□ -0.91
GGA3-207ENST00000578896 ZMIZ1Q9ULJ6 1067 aa9.35□□□□□ -0.91
GGA3-207ENST00000578896 STRIP2Q9ULQ0 834 aa9.35□□□□□ -0.91
GGA3-207ENST00000578896 SLC27A6Q9Y2P4 619 aa9.35□□□□□ -0.91
GGA3-207ENST00000578896 CELSR3Q9NYQ7 3312 aa9.34□□□□□ -0.91
GGA3-207ENST00000578896 YJEFN3A6XGL0 299 aa9.34□□□□□ -0.91
GGA3-207ENST00000578896 E7ENQ6 273 aa9.34□□□□□ -0.91
GGA3-207ENST00000578896 RNF225M0QZC1 329 aaPredicted RBP9.34□□□□□ -0.91
GGA3-207ENST00000578896 GFRA2O00451 464 aa9.34□□□□□ -0.91
GGA3-207ENST00000578896 ARHGAP33O14559 1287 aa9.34□□□□□ -0.91
GGA3-207ENST00000578896 SH3BP5O60239 455 aa9.34□□□□□ -0.91
GGA3-207ENST00000578896 OPHN1O60890 802 aa9.34□□□□□ -0.91
GGA3-207ENST00000578896 EPHX1P07099 455 aa9.34□□□□□ -0.91
GGA3-207ENST00000578896 CD59P13987 128 aa9.34□□□□□ -0.91
GGA3-207ENST00000578896 CD44P16070 742 aaKnown RBP9.34□□□□□ -0.91
GGA3-207ENST00000578896 CD6P30203 668 aa9.34□□□□□ -0.91
GGA3-207ENST00000578896 CHKAP35790 457 aa9.34□□□□□ -0.91
GGA3-207ENST00000578896 SGSHP51688 502 aa9.34□□□□□ -0.91
GGA3-207ENST00000578896 MCCD1P59942 119 aaPredicted RBP9.34□□□□□ -0.91
GGA3-207ENST00000578896 ENPEPQ07075 957 aa9.34□□□□□ -0.91
GGA3-207ENST00000578896 STARD3Q14849 445 aa9.34□□□□□ -0.91
GGA3-207ENST00000578896 SGO2Q562F6 1265 aa9.34□□□□□ -0.91
GGA3-207ENST00000578896 ZNF658Q5TYW1 1059 aaPredicted RBP9.34□□□□□ -0.91
GGA3-207ENST00000578896 BSPRYQ5W0U4 402 aa9.34□□□□□ -0.91
GGA3-207ENST00000578896 PM20D1Q6GTS8 502 aa9.34□□□□□ -0.91
GGA3-207ENST00000578896 TMPRSS6Q8IU80 811 aa9.34□□□□□ -0.91
GGA3-207ENST00000578896 CHCHD4Q8N4Q1 142 aa9.34□□□□□ -0.91
GGA3-207ENST00000578896 ZNF276Q8N554 614 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms