RNA–Protein interactions for RNA: ENST00000578547.1

IFT20-207, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best)

Gene IFT20, Length 962 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-207ENST00000578547 TCEAL1Q15170 157 aa12.63□□□□□ -0.39
IFT20-207ENST00000578547 TRIP4Q15650 581 aaPredicted RBP12.63□□□□□ -0.39
IFT20-207ENST00000578547 ZC3H12AQ5D1E8 599 aaKnown RBP12.63□□□□□ -0.39
IFT20-207ENST00000578547 FAM131BQ86XD5 332 aa12.63□□□□□ -0.39
IFT20-207ENST00000578547 C17orf53Q8N3J3 647 aaPredicted RBP12.63□□□□□ -0.39
IFT20-207ENST00000578547 TPCN2Q8NHX9 752 aa12.63□□□□□ -0.39
IFT20-207ENST00000578547 SH3RF2Q8TEC5 729 aa12.63□□□□□ -0.39
IFT20-207ENST00000578547 FNIP1Q8TF40 1166 aa12.63□□□□□ -0.39
IFT20-207ENST00000578547 SMARCD2Q92925 531 aa12.63□□□□□ -0.39
IFT20-207ENST00000578547 USP13Q92995 863 aaPredicted RBP12.63□□□□□ -0.39
IFT20-207ENST00000578547 NT5C3BQ969T7 300 aa12.63□□□□□ -0.39
IFT20-207ENST00000578547 ACSF2Q96CM8 615 aaPredicted RBP12.63□□□□□ -0.39
IFT20-207ENST00000578547 ZFRQ96KR1 1074 aaKnown RBP12.63□□□□□ -0.39
IFT20-207ENST00000578547 ASB16Q96NS5 453 aa12.63□□□□□ -0.39
IFT20-207ENST00000578547 EPS15L1Q9UBC2 864 aa12.63□□□□□ -0.39
IFT20-207ENST00000578547 PCSK1NQ9UHG2 260 aa12.63□□□□□ -0.39
IFT20-207ENST00000578547 ARHGAP26Q9UNA1 814 aa12.63□□□□□ -0.39
IFT20-207ENST00000578547 TLR6Q9Y2C9 796 aa12.63□□□□□ -0.39
IFT20-207ENST00000578547 HBS1LQ9Y450 684 aaKnown RBP12.63□□□□□ -0.39
IFT20-207ENST00000578547 HYOU1Q9Y4L1 999 aa12.63□□□□□ -0.39
IFT20-207ENST00000578547 NUP210Q8TEM1 1887 aaPredicted RBP12.63□□□□□ -0.39
IFT20-207ENST00000578547 LOC730098B7Z3J9 87 aa12.62□□□□□ -0.39
IFT20-207ENST00000578547 F9P00740 461 aa12.62□□□□□ -0.39
IFT20-207ENST00000578547 APOEP02649 317 aa12.62□□□□□ -0.39
IFT20-207ENST00000578547 TNNT1P13805 278 aa12.62□□□□□ -0.39
IFT20-207ENST00000578547 CORO1AP31146 461 aaKnown RBP12.62□□□□□ -0.39
IFT20-207ENST00000578547 KPNA1P52294 538 aaPredicted RBP12.62□□□□□ -0.39
IFT20-207ENST00000578547 HADHBP55084 474 aaKnown RBP12.62□□□□□ -0.39
IFT20-207ENST00000578547 HDAC4P56524 1084 aa12.62□□□□□ -0.39
IFT20-207ENST00000578547 COG7P83436 770 aa12.62□□□□□ -0.39
IFT20-207ENST00000578547 ZXDBP98169 803 aa12.62□□□□□ -0.39
IFT20-207ENST00000578547 IFI16Q16666 785 aaKnown RBP12.62□□□□□ -0.39
IFT20-207ENST00000578547 STRADAQ7RTN6 431 aa12.62□□□□□ -0.39
IFT20-207ENST00000578547 DAAM2Q86T65 1068 aa12.62□□□□□ -0.39
IFT20-207ENST00000578547 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.62□□□□□ -0.39
IFT20-207ENST00000578547 ADHFE1Q8IWW8 467 aa12.62□□□□□ -0.39
IFT20-207ENST00000578547 CCAR2Q8N163 923 aaKnown RBP12.62□□□□□ -0.39
IFT20-207ENST00000578547 CENPIQ92674 756 aaPredicted RBP12.62□□□□□ -0.39
IFT20-207ENST00000578547 WBP2Q969T9 261 aa12.62□□□□□ -0.39
IFT20-207ENST00000578547 PLD4Q96BZ4 506 aa12.62□□□□□ -0.39
IFT20-207ENST00000578547 PGAP3Q96FM1 320 aaPredicted RBP12.62□□□□□ -0.39
IFT20-207ENST00000578547 FCRL2Q96LA5 508 aaPredicted RBP12.62□□□□□ -0.39
IFT20-207ENST00000578547 KXD1Q9BQD3 176 aa12.62□□□□□ -0.39
IFT20-207ENST00000578547 LIMD1Q9UGP4 676 aa12.62□□□□□ -0.39
IFT20-207ENST00000578547 LCMT1Q9UIC8 334 aa12.62□□□□□ -0.39
IFT20-207ENST00000578547 SH3BP1Q9Y3L3 701 aa12.62□□□□□ -0.39
IFT20-207ENST00000578547 NR2E1Q9Y466 385 aa12.62□□□□□ -0.39
IFT20-207ENST00000578547 CAPN6Q9Y6Q1 641 aa12.62□□□□□ -0.39
IFT20-207ENST00000578547 ZFP37Q9Y6Q3 630 aaPredicted RBP12.62□□□□□ -0.39
IFT20-207ENST00000578547 GRID2IPA4D2P6 1211 aa12.61□□□□□ -0.39
IFT20-207ENST00000578547 SPOPO43791 374 aa12.61□□□□□ -0.39
IFT20-207ENST00000578547 LRCH4O75427 683 aa12.61□□□□□ -0.39
IFT20-207ENST00000578547 PALMO75781 387 aa12.61□□□□□ -0.39
IFT20-207ENST00000578547 STC2O76061 302 aa12.61□□□□□ -0.39
IFT20-207ENST00000578547 IGLV3-27P01718 113 aa12.61□□□□□ -0.39
IFT20-207ENST00000578547 TCF4P15884 667 aa12.61□□□□□ -0.39
IFT20-207ENST00000578547 FCARP24071 287 aa12.61□□□□□ -0.39
IFT20-207ENST00000578547 WEE1P30291 646 aa12.61□□□□□ -0.39
IFT20-207ENST00000578547 CCR1P32246 355 aa12.61□□□□□ -0.39
IFT20-207ENST00000578547 MAN1A1P33908 653 aa12.61□□□□□ -0.39
IFT20-207ENST00000578547 HARS2P49590 506 aaKnown RBP12.61□□□□□ -0.39
IFT20-207ENST00000578547 ZP2Q05996 745 aa12.61□□□□□ -0.39
IFT20-207ENST00000578547 USP4Q13107 963 aa12.61□□□□□ -0.39
IFT20-207ENST00000578547 NNTQ13423 1086 aa12.61□□□□□ -0.39
IFT20-207ENST00000578547 HS1BP3Q53T59 392 aa12.61□□□□□ -0.39
IFT20-207ENST00000578547 NUGGCQ68CJ6 796 aa12.61□□□□□ -0.39
IFT20-207ENST00000578547 TANGO2Q6ICL3 276 aa12.61□□□□□ -0.39
IFT20-207ENST00000578547 C11orf63Q6NUN7 778 aa12.61□□□□□ -0.39
IFT20-207ENST00000578547 PARM1Q6UWI2 310 aa12.61□□□□□ -0.39
IFT20-207ENST00000578547 BNIPLQ7Z465 357 aa12.61□□□□□ -0.39
IFT20-207ENST00000578547 DDX42Q86XP3 938 aaKnown RBP eCLIP12.61□□□□□ -0.39
IFT20-207ENST00000578547 DENND1CQ8IV53 801 aa12.61□□□□□ -0.39
IFT20-207ENST00000578547 REXO1L1PQ8IX06 675 aa12.61□□□□□ -0.39
IFT20-207ENST00000578547 ARFGAP1Q8N6T3 406 aa12.61□□□□□ -0.39
IFT20-207ENST00000578547 CELF5Q8N6W0 485 aaKnown RBP12.61□□□□□ -0.39
IFT20-207ENST00000578547 NIPA2Q8N8Q9 360 aa12.61□□□□□ -0.39
IFT20-207ENST00000578547 RIN3Q8TB24 985 aa12.61□□□□□ -0.39
IFT20-207ENST00000578547 ADAMTS19Q8TE59 1207 aa12.61□□□□□ -0.39
IFT20-207ENST00000578547 RSPRY1Q96DX4 576 aa12.61□□□□□ -0.39
IFT20-207ENST00000578547 TKTL2Q9H0I9 626 aa12.61□□□□□ -0.39
IFT20-207ENST00000578547 WDCPQ9H6R7 721 aa12.61□□□□□ -0.39
IFT20-207ENST00000578547 ZWILCHQ9H900 591 aa12.61□□□□□ -0.39
IFT20-207ENST00000578547 KIF9Q9HAQ2 790 aa12.61□□□□□ -0.39
IFT20-207ENST00000578547 TRPV4Q9HBA0 871 aa12.61□□□□□ -0.39
IFT20-207ENST00000578547 ZFP14Q9HCL3 533 aa12.61□□□□□ -0.39
IFT20-207ENST00000578547 TMPRSS4Q9NRS4 437 aa12.61□□□□□ -0.39
IFT20-207ENST00000578547 PRKAG3Q9UGI9 489 aa12.61□□□□□ -0.39
IFT20-207ENST00000578547 LSM7Q9UK45 103 aaKnown RBP12.61□□□□□ -0.39
IFT20-207ENST00000578547 DOCK8Q8NF50 2099 aa12.61□□□□□ -0.39
IFT20-207ENST00000578547 C5orf42Q9H799 3197 aa12.61□□□□□ -0.39
IFT20-207ENST00000578547 HEPACAM2A8MVW5 462 aa12.6□□□□□ -0.39
IFT20-207ENST00000578547 ANHXE9PGG2 379 aa12.6□□□□□ -0.39
IFT20-207ENST00000578547 PRPSAP2O60256 369 aa12.6□□□□□ -0.39
IFT20-207ENST00000578547 ENDOD1O94919 500 aa12.6□□□□□ -0.39
IFT20-207ENST00000578547 FTCDO95954 541 aa12.6□□□□□ -0.39
IFT20-207ENST00000578547 SLC2A3P11169 496 aa12.6□□□□□ -0.39
IFT20-207ENST00000578547 COMTP21964 271 aa12.6□□□□□ -0.39
IFT20-207ENST00000578547 MIPP30301 263 aa12.6□□□□□ -0.39
IFT20-207ENST00000578547 GGCXP38435 758 aa12.6□□□□□ -0.39
IFT20-207ENST00000578547 CXCR3P49682 368 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms