RNA–Protein interactions for RNA: ENST00000577085.1

SF3B3-215, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 529 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-215ENST00000577085 DUSP15Q9H1R2 295 aaPredicted RBP16.19■□□□□ 0.18
SF3B3-215ENST00000577085 CNTN6Q9UQ52 1028 aa16.19■□□□□ 0.18
SF3B3-215ENST00000577085 MSI1O43347 362 aaKnown RBP16.18■□□□□ 0.18
SF3B3-215ENST00000577085 PENKP01210 267 aaPredicted RBP16.18■□□□□ 0.18
SF3B3-215ENST00000577085 TGM1P22735 817 aa16.18■□□□□ 0.18
SF3B3-215ENST00000577085 MPLP40238 635 aa16.18■□□□□ 0.18
SF3B3-215ENST00000577085 SLC11A2P49281 568 aa16.18■□□□□ 0.18
SF3B3-215ENST00000577085 CCDC6Q16204 474 aa16.18■□□□□ 0.18
SF3B3-215ENST00000577085 HSP90AA4PQ58FG1 418 aa16.18■□□□□ 0.18
SF3B3-215ENST00000577085 FYB2Q5VWT5 728 aa16.18■□□□□ 0.18
SF3B3-215ENST00000577085 NUGGCQ68CJ6 796 aa16.18■□□□□ 0.18
SF3B3-215ENST00000577085 DENND1BQ6P3S1 775 aa16.18■□□□□ 0.18
SF3B3-215ENST00000577085 GJB7Q6PEY0 223 aa16.18■□□□□ 0.18
SF3B3-215ENST00000577085 ANKS1BQ7Z6G8 1248 aa16.18■□□□□ 0.18
SF3B3-215ENST00000577085 UNC45BQ8IWX7 931 aa16.18■□□□□ 0.18
SF3B3-215ENST00000577085 SCUBE3Q8IX30 993 aa16.18■□□□□ 0.18
SF3B3-215ENST00000577085 NETO1Q8TDF5 533 aa16.18■□□□□ 0.18
SF3B3-215ENST00000577085 CLEC4CQ8WTT0 213 aa16.18■□□□□ 0.18
SF3B3-215ENST00000577085 ZNF606Q8WXB4 792 aa16.18■□□□□ 0.18
SF3B3-215ENST00000577085 DLL3Q9NYJ7 618 aa16.18■□□□□ 0.18
SF3B3-215ENST00000577085 MYOFQ9NZM1 2061 aa16.18■□□□□ 0.18
SF3B3-215ENST00000577085 EP300Q09472 2414 aaPredicted RBP16.17■□□□□ 0.18
SF3B3-215ENST00000577085 OTOGLQ3ZCN5 2332 aa16.17■□□□□ 0.18
SF3B3-215ENST00000577085 PRRT4C9JH25 899 aa16.17■□□□□ 0.18
SF3B3-215ENST00000577085 TSPAN3O60637 253 aa16.17■□□□□ 0.18
SF3B3-215ENST00000577085 LATS1O95835 1130 aa16.17■□□□□ 0.18
SF3B3-215ENST00000577085 CISD3P0C7P0 127 aa16.17■□□□□ 0.18
SF3B3-215ENST00000577085 HNRNPLP14866 589 aaKnown RBP eCLIP16.17■□□□□ 0.18
SF3B3-215ENST00000577085 PON1P27169 355 aa16.17■□□□□ 0.18
SF3B3-215ENST00000577085 GPD2P43304 727 aa16.17■□□□□ 0.18
SF3B3-215ENST00000577085 DHPSP49366 369 aaPredicted RBP16.17■□□□□ 0.18
SF3B3-215ENST00000577085 PTK2Q05397 1052 aa16.17■□□□□ 0.18
SF3B3-215ENST00000577085 STARD3Q14849 445 aa16.17■□□□□ 0.18
SF3B3-215ENST00000577085 VWA3BQ502W6 1294 aa16.17■□□□□ 0.18
SF3B3-215ENST00000577085 ADGRF1Q5T601 910 aa16.17■□□□□ 0.18
SF3B3-215ENST00000577085 CLEC17AQ6ZS10 378 aa16.17■□□□□ 0.18
SF3B3-215ENST00000577085 LPCAT2Q7L5N7 544 aa16.17■□□□□ 0.18
SF3B3-215ENST00000577085 IRF2BP1Q8IU81 584 aa16.17■□□□□ 0.18
SF3B3-215ENST00000577085 RLN3Q8WXF3 142 aa16.17■□□□□ 0.18
SF3B3-215ENST00000577085 NOX5Q96PH1 765 aa16.17■□□□□ 0.18
SF3B3-215ENST00000577085 MED15Q96RN5 788 aa16.17■□□□□ 0.18
SF3B3-215ENST00000577085 DDX50Q9BQ39 737 aaKnown RBP16.17■□□□□ 0.18
SF3B3-215ENST00000577085 TUBGCP2Q9BSJ2 902 aa16.17■□□□□ 0.18
SF3B3-215ENST00000577085 SLC2A11Q9BYW1 496 aa16.17■□□□□ 0.18
SF3B3-215ENST00000577085 CIPCQ9C0C6 399 aa16.17■□□□□ 0.18
SF3B3-215ENST00000577085 NDST4Q9H3R1 872 aa16.17■□□□□ 0.18
SF3B3-215ENST00000577085 VPS45Q9NRW7 570 aa16.17■□□□□ 0.18
SF3B3-215ENST00000577085 SLC27A6Q9Y2P4 619 aa16.17■□□□□ 0.18
SF3B3-215ENST00000577085 WDR87Q6ZQQ6 2873 aa16.16■□□□□ 0.18
SF3B3-215ENST00000577085 GVINP1Q7Z2Y8 2422 aa16.16■□□□□ 0.18
SF3B3-215ENST00000577085 TYW5A2RUC4 315 aaKnown RBP16.16■□□□□ 0.18
SF3B3-215ENST00000577085 NPC1O15118 1278 aa16.16■□□□□ 0.18
SF3B3-215ENST00000577085 TPM2P07951 284 aa16.16■□□□□ 0.18
SF3B3-215ENST00000577085 ZNF806P0C7X5 589 aa16.16■□□□□ 0.18
SF3B3-215ENST00000577085 TBX4P57082 545 aa16.16■□□□□ 0.18
SF3B3-215ENST00000577085 SNX16P57768 344 aa16.16■□□□□ 0.18
SF3B3-215ENST00000577085 MEA1Q16626 185 aa16.16■□□□□ 0.18
SF3B3-215ENST00000577085 CT47A1Q5JQC4 288 aaPredicted RBP16.16■□□□□ 0.18
SF3B3-215ENST00000577085 PMS2CLQ68D20 193 aa16.16■□□□□ 0.18
SF3B3-215ENST00000577085 MSANTD2Q6P1R3 559 aa16.16■□□□□ 0.18
SF3B3-215ENST00000577085 CYP2U1Q7Z449 544 aa16.16■□□□□ 0.18
SF3B3-215ENST00000577085 CCDC117Q8IWD4 279 aaPredicted RBP16.16■□□□□ 0.18
SF3B3-215ENST00000577085 STK32AQ8WU08 396 aa16.16■□□□□ 0.18
SF3B3-215ENST00000577085 ERLEC1Q96DZ1 483 aa16.16■□□□□ 0.18
SF3B3-215ENST00000577085 TMA16Q96EY4 203 aaKnown RBP16.16■□□□□ 0.18
SF3B3-215ENST00000577085 SERPINB11Q96P15 392 aa16.16■□□□□ 0.18
SF3B3-215ENST00000577085 ACOX2Q99424 681 aa16.16■□□□□ 0.18
SF3B3-215ENST00000577085 RTKNQ9BST9 563 aa16.16■□□□□ 0.18
SF3B3-215ENST00000577085 LMBRD1Q9NUN5 540 aa16.16■□□□□ 0.18
SF3B3-215ENST00000577085 CACNA2D2Q9NY47 1150 aa16.16■□□□□ 0.18
SF3B3-215ENST00000577085 FBXO10Q9UK96 956 aa16.16■□□□□ 0.18
SF3B3-215ENST00000577085 DNAJC12Q9UKB3 198 aa16.16■□□□□ 0.18
SF3B3-215ENST00000577085 CEP83Q9Y592 693 aa16.16■□□□□ 0.18
SF3B3-215ENST00000577085 ZNF292O60281 2723 aa16.15■□□□□ 0.18
SF3B3-215ENST00000577085 DMXL1Q9Y485 3027 aa16.15■□□□□ 0.18
SF3B3-215ENST00000577085 KCNJ18B7U540 433 aa16.15■□□□□ 0.18
SF3B3-215ENST00000577085 GFRA2O00451 464 aa16.15■□□□□ 0.18
SF3B3-215ENST00000577085 SYNCRIPO60506 623 aaKnown RBP16.15■□□□□ 0.18
SF3B3-215ENST00000577085 GABBR2O75899 941 aa16.15■□□□□ 0.18
SF3B3-215ENST00000577085 CAVIN2O95810 425 aa16.15■□□□□ 0.18
SF3B3-215ENST00000577085 CHRM1P11229 460 aaPredicted RBP16.15■□□□□ 0.18
SF3B3-215ENST00000577085 KRT9P35527 623 aa16.15■□□□□ 0.18
SF3B3-215ENST00000577085 P2RY2P41231 377 aa16.15■□□□□ 0.18
SF3B3-215ENST00000577085 APBA1Q02410 837 aa16.15■□□□□ 0.18
SF3B3-215ENST00000577085 KCNJ12Q14500 433 aa16.15■□□□□ 0.18
SF3B3-215ENST00000577085 EIF4HQ15056 248 aaKnown RBP16.15■□□□□ 0.18
SF3B3-215ENST00000577085 SF3A2Q15428 464 aaKnown RBP16.15■□□□□ 0.18
SF3B3-215ENST00000577085 IL31Q6EBC2 164 aa16.15■□□□□ 0.18
SF3B3-215ENST00000577085 FAM217AQ8IXS0 508 aa16.15■□□□□ 0.18
SF3B3-215ENST00000577085 OLIG1Q8TAK6 271 aa16.15■□□□□ 0.18
SF3B3-215ENST00000577085 IPO4Q8TEX9 1081 aaKnown RBP16.15■□□□□ 0.18
SF3B3-215ENST00000577085 GABRG3Q99928 467 aa16.15■□□□□ 0.18
SF3B3-215ENST00000577085 PDCL3Q9H2J4 239 aa16.15■□□□□ 0.18
SF3B3-215ENST00000577085 SYNCQ9H7C4 482 aa16.15■□□□□ 0.18
SF3B3-215ENST00000577085 ACP6Q9NPH0 428 aa16.15■□□□□ 0.18
SF3B3-215ENST00000577085 CALCOCO1Q9P1Z2 691 aa16.15■□□□□ 0.18
SF3B3-215ENST00000577085 RAD54BQ9Y620 910 aa16.15■□□□□ 0.18
SF3B3-215ENST00000577085 E5RJQ4 531 aa16.14■□□□□ 0.17
SF3B3-215ENST00000577085 IRAK2O43187 625 aa16.14■□□□□ 0.17
SF3B3-215ENST00000577085 TIMM44O43615 452 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms