RNA–Protein interactions for RNA: ENST00000576218.5

SMG6-220, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 902 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-220ENST00000576218 DQX1Q8TE96 717 aaKnown RBP15.9■□□□□ 0.14
SMG6-220ENST00000576218 USP33Q8TEY7 942 aa15.9■□□□□ 0.14
SMG6-220ENST00000576218 EZH1Q92800 747 aaPredicted RBP15.9■□□□□ 0.14
SMG6-220ENST00000576218 RNF34Q969K3 372 aa15.9■□□□□ 0.14
SMG6-220ENST00000576218 DDX50Q9BQ39 737 aaKnown RBP15.9■□□□□ 0.14
SMG6-220ENST00000576218 GANQ9H2C0 597 aa15.9■□□□□ 0.14
SMG6-220ENST00000576218 C2orf42Q9NWW7 574 aa15.9■□□□□ 0.14
SMG6-220ENST00000576218 NCDNQ9UBB6 729 aa15.9■□□□□ 0.14
SMG6-220ENST00000576218 SYNJ2BP-COX16A0A087WUM0 186 aa15.89■□□□□ 0.13
SMG6-220ENST00000576218 K7ESF4 209 aa15.89■□□□□ 0.13
SMG6-220ENST00000576218 ZBTB24O43167 697 aaPredicted RBP15.89■□□□□ 0.13
SMG6-220ENST00000576218 TSPAN3O60637 253 aa15.89■□□□□ 0.13
SMG6-220ENST00000576218 HSF2BPO75031 334 aa15.89■□□□□ 0.13
SMG6-220ENST00000576218 APBB3O95704 486 aa15.89■□□□□ 0.13
SMG6-220ENST00000576218 MOCS2O96007 188 aaPredicted RBP15.89■□□□□ 0.13
SMG6-220ENST00000576218 ATP1A3P13637 1013 aa15.89■□□□□ 0.13
SMG6-220ENST00000576218 ZNF18P17022 549 aa15.89■□□□□ 0.13
SMG6-220ENST00000576218 PXNP49023 591 aaPredicted RBP15.89■□□□□ 0.13
SMG6-220ENST00000576218 RPL34P49207 117 aaKnown RBP15.89■□□□□ 0.13
SMG6-220ENST00000576218 ZNF445P59923 1031 aa15.89■□□□□ 0.13
SMG6-220ENST00000576218 CDK17Q00537 523 aa15.89■□□□□ 0.13
SMG6-220ENST00000576218 ARID5AQ03989 594 aa15.89■□□□□ 0.13
SMG6-220ENST00000576218 NCAPHQ15003 741 aa15.89■□□□□ 0.13
SMG6-220ENST00000576218 SKOR2Q2VWA4 1001 aaPredicted RBP15.89■□□□□ 0.13
SMG6-220ENST00000576218 MPPE1Q53F39 396 aa15.89■□□□□ 0.13
SMG6-220ENST00000576218 DCAF6Q58WW2 860 aa15.89■□□□□ 0.13
SMG6-220ENST00000576218 EOGTQ5NDL2 527 aa15.89■□□□□ 0.13
SMG6-220ENST00000576218 SDE2Q6IQ49 451 aa15.89■□□□□ 0.13
SMG6-220ENST00000576218 ASCL5Q7RTU5 278 aa15.89■□□□□ 0.13
SMG6-220ENST00000576218 CCDC117Q8IWD4 279 aaPredicted RBP15.89■□□□□ 0.13
SMG6-220ENST00000576218 CAMKK1Q8N5S9 505 aa15.89■□□□□ 0.13
SMG6-220ENST00000576218 ALLCQ8N6M5 410 aa15.89■□□□□ 0.13
SMG6-220ENST00000576218 TXNDC5Q8NBS9 432 aaKnown RBP15.89■□□□□ 0.13
SMG6-220ENST00000576218 ZBTB44Q8NCP5 570 aa15.89■□□□□ 0.13
SMG6-220ENST00000576218 NAA15Q9BXJ9 866 aaKnown RBP15.89■□□□□ 0.13
SMG6-220ENST00000576218 SEPT11Q9NVA2 429 aaKnown RBP15.89■□□□□ 0.13
SMG6-220ENST00000576218 COX16Q9P0S2 106 aa15.89■□□□□ 0.13
SMG6-220ENST00000576218 BCCIPQ9P287 314 aaKnown RBP eCLIP15.89■□□□□ 0.13
SMG6-220ENST00000576218 TJP2Q9UDY2 1190 aa15.89■□□□□ 0.13
SMG6-220ENST00000576218 ZFHX2Q9C0A1 2572 aaPredicted RBP15.88■□□□□ 0.13
SMG6-220ENST00000576218 MYOFQ9NZM1 2061 aa15.88■□□□□ 0.13
SMG6-220ENST00000576218 GOLGA6L19H0YKK7 550 aa15.88■□□□□ 0.13
SMG6-220ENST00000576218 GRAP2O75791 330 aa15.88■□□□□ 0.13
SMG6-220ENST00000576218 ALDH1A2O94788 518 aa15.88■□□□□ 0.13
SMG6-220ENST00000576218 LSM8O95777 96 aaKnown RBP15.88■□□□□ 0.13
SMG6-220ENST00000576218 LATS1O95835 1130 aa15.88■□□□□ 0.13
SMG6-220ENST00000576218 SERPINC1P01008 464 aa15.88■□□□□ 0.13
SMG6-220ENST00000576218 GBP1P32455 592 aa15.88■□□□□ 0.13
SMG6-220ENST00000576218 SOX5P35711 763 aa15.88■□□□□ 0.13
SMG6-220ENST00000576218 DGKEP52429 567 aa15.88■□□□□ 0.13
SMG6-220ENST00000576218 DMWDQ09019 674 aa15.88■□□□□ 0.13
SMG6-220ENST00000576218 SIM2Q14190 667 aaPredicted RBP15.88■□□□□ 0.13
SMG6-220ENST00000576218 HSF5Q4G112 596 aaPredicted RBP15.88■□□□□ 0.13
SMG6-220ENST00000576218 ADGRF1Q5T601 910 aa15.88■□□□□ 0.13
SMG6-220ENST00000576218 FAM183BPQ6ZVS7 135 aa15.88■□□□□ 0.13
SMG6-220ENST00000576218 TAC4Q86UU9 113 aa15.88■□□□□ 0.13
SMG6-220ENST00000576218 ERICH1Q86X53 443 aa15.88■□□□□ 0.13
SMG6-220ENST00000576218 SFTPA1Q8IWL2 248 aa15.88■□□□□ 0.13
SMG6-220ENST00000576218 DHX40Q8IX18 779 aaKnown RBP15.88■□□□□ 0.13
SMG6-220ENST00000576218 CPXM2Q8N436 756 aa15.88■□□□□ 0.13
SMG6-220ENST00000576218 POLMQ9NP87 494 aaPredicted RBP15.88■□□□□ 0.13
SMG6-220ENST00000576218 POLR3BQ9NW08 1133 aaPredicted RBP15.88■□□□□ 0.13
SMG6-220ENST00000576218 SLC12A6Q9UHW9 1150 aa15.88■□□□□ 0.13
SMG6-220ENST00000576218 GMEB2Q9UKD1 530 aa15.88■□□□□ 0.13
SMG6-220ENST00000576218 MMP17Q9ULZ9 603 aa15.88■□□□□ 0.13
SMG6-220ENST00000576218 SMG5Q9UPR3 1016 aaKnown RBP15.88■□□□□ 0.13
SMG6-220ENST00000576218 TLR6Q9Y2C9 796 aa15.88■□□□□ 0.13
SMG6-220ENST00000576218 ATG2BQ96BY7 2078 aa15.88■□□□□ 0.13
SMG6-220ENST00000576218 TRIM24O15164 1050 aa15.87■□□□□ 0.13
SMG6-220ENST00000576218 AXIN1O15169 862 aa15.87■□□□□ 0.13
SMG6-220ENST00000576218 TRUB2O95900 331 aaKnown RBP15.87■□□□□ 0.13
SMG6-220ENST00000576218 ERBB2P04626 1255 aa15.87■□□□□ 0.13
SMG6-220ENST00000576218 GLI1P08151 1106 aa15.87■□□□□ 0.13
SMG6-220ENST00000576218 TDGF1P13385 188 aa15.87■□□□□ 0.13
SMG6-220ENST00000576218 CNR2P34972 360 aa15.87■□□□□ 0.13
SMG6-220ENST00000576218 RNASE9P60153 205 aaKnown RBP15.87■□□□□ 0.13
SMG6-220ENST00000576218 RING1Q06587 406 aa15.87■□□□□ 0.13
SMG6-220ENST00000576218 MESP2Q0VG99 397 aa15.87■□□□□ 0.13
SMG6-220ENST00000576218 LPAL2Q16609 132 aa15.87■□□□□ 0.13
SMG6-220ENST00000576218 PTPN20Q4JDL3 420 aa15.87■□□□□ 0.13
SMG6-220ENST00000576218 EMC10Q5UCC4 262 aa15.87■□□□□ 0.13
SMG6-220ENST00000576218 SYPL2Q5VXT5 272 aa15.87■□□□□ 0.13
SMG6-220ENST00000576218 ANO7Q6IWH7 933 aa15.87■□□□□ 0.13
SMG6-220ENST00000576218 DPY19L2P1Q6NXN4 242 aa15.87■□□□□ 0.13
SMG6-220ENST00000576218 BEND5Q7L4P6 421 aa15.87■□□□□ 0.13
SMG6-220ENST00000576218 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.87■□□□□ 0.13
SMG6-220ENST00000576218 NOP9Q86U38 636 aaKnown RBP15.87■□□□□ 0.13
SMG6-220ENST00000576218 WDR5BQ86VZ2 330 aa15.87■□□□□ 0.13
SMG6-220ENST00000576218 ZNF677Q86XU0 584 aa15.87■□□□□ 0.13
SMG6-220ENST00000576218 ZDHHC17Q8IUH5 632 aa15.87■□□□□ 0.13
SMG6-220ENST00000576218 CHPFQ8IZ52 775 aa15.87■□□□□ 0.13
SMG6-220ENST00000576218 PGBD3Q8N328 593 aa15.87■□□□□ 0.13
SMG6-220ENST00000576218 WDTC1Q8N5D0 677 aa15.87■□□□□ 0.13
SMG6-220ENST00000576218 EPS8L1Q8TE68 723 aa15.87■□□□□ 0.13
SMG6-220ENST00000576218 UCMAQ8WVF2 138 aa15.87■□□□□ 0.13
SMG6-220ENST00000576218 TMA16Q96EY4 203 aaKnown RBP15.87■□□□□ 0.13
SMG6-220ENST00000576218 ERGIC2Q96RQ1 377 aa15.87■□□□□ 0.13
SMG6-220ENST00000576218 ZDHHC4Q9NPG8 344 aa15.87■□□□□ 0.13
SMG6-220ENST00000576218 ASNSD1Q9NWL6 643 aa15.87■□□□□ 0.13
SMG6-220ENST00000576218 SIK3Q9Y2K2 1263 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms