RNA–Protein interactions for RNA: ENST00000575976.1

NUP88-211, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-211ENST00000575976 RCCD1A6NED2 376 aa8.92□□□□□ -0.98
NUP88-211ENST00000575976 TMEM191CA6NGB0 347 aa8.92□□□□□ -0.98
NUP88-211ENST00000575976 GREM1O60565 184 aa8.92□□□□□ -0.98
NUP88-211ENST00000575976 STC2O76061 302 aa8.92□□□□□ -0.98
NUP88-211ENST00000575976 IPO7O95373 1038 aaKnown RBP8.92□□□□□ -0.98
NUP88-211ENST00000575976 IGLV3-27P01718 113 aa8.92□□□□□ -0.98
NUP88-211ENST00000575976 KLKB1P03952 638 aa8.92□□□□□ -0.98
NUP88-211ENST00000575976 SDC4P31431 198 aa8.92□□□□□ -0.98
NUP88-211ENST00000575976 GBP1P32455 592 aa8.92□□□□□ -0.98
NUP88-211ENST00000575976 ATXN1P54253 815 aaKnown RBP8.92□□□□□ -0.98
NUP88-211ENST00000575976 TBX4P57082 545 aa8.92□□□□□ -0.98
NUP88-211ENST00000575976 ATP11AP98196 1134 aa8.92□□□□□ -0.98
NUP88-211ENST00000575976 DEUP1Q05D60 604 aa8.92□□□□□ -0.98
NUP88-211ENST00000575976 CCDC173Q0VFZ6 552 aa8.92□□□□□ -0.98
NUP88-211ENST00000575976 NME3Q13232 169 aa8.92□□□□□ -0.98
NUP88-211ENST00000575976 CDO1Q16878 200 aa8.92□□□□□ -0.98
NUP88-211ENST00000575976 C15orf59Q2T9L4 293 aaPredicted RBP8.92□□□□□ -0.98
NUP88-211ENST00000575976 SLC25A52Q3SY17 297 aa8.92□□□□□ -0.98
NUP88-211ENST00000575976 RAB6CQ53S08 254 aa8.92□□□□□ -0.98
NUP88-211ENST00000575976 SH3PXD2AQ5TCZ1 1133 aa8.92□□□□□ -0.98
NUP88-211ENST00000575976 BNIPLQ7Z465 357 aa8.92□□□□□ -0.98
NUP88-211ENST00000575976 DDX42Q86XP3 938 aaKnown RBP eCLIP8.92□□□□□ -0.98
NUP88-211ENST00000575976 MFSD6LQ8IWD5 586 aa8.92□□□□□ -0.98
NUP88-211ENST00000575976 SLC44A3Q8N4M1 653 aa8.92□□□□□ -0.98
NUP88-211ENST00000575976 DEPDC1BQ8WUY9 529 aa8.92□□□□□ -0.98
NUP88-211ENST00000575976 NXPE3Q969Y0 559 aa8.92□□□□□ -0.98
NUP88-211ENST00000575976 PGAP3Q96FM1 320 aaPredicted RBP8.92□□□□□ -0.98
NUP88-211ENST00000575976 SLC39A13Q96H72 371 aa8.92□□□□□ -0.98
NUP88-211ENST00000575976 FCRL2Q96LA5 508 aaPredicted RBP8.92□□□□□ -0.98
NUP88-211ENST00000575976 ZNF830Q96NB3 372 aaPredicted RBP8.92□□□□□ -0.98
NUP88-211ENST00000575976 PRRX2Q99811 253 aa8.92□□□□□ -0.98
NUP88-211ENST00000575976 DESI2Q9BSY9 194 aa8.92□□□□□ -0.98
NUP88-211ENST00000575976 NUP85Q9BW27 656 aa8.92□□□□□ -0.98
NUP88-211ENST00000575976 RAB6CQ9H0N0 254 aa8.92□□□□□ -0.98
NUP88-211ENST00000575976 FAM204AQ9H8W3 233 aa8.92□□□□□ -0.98
NUP88-211ENST00000575976 CD320Q9NPF0 282 aa8.92□□□□□ -0.98
NUP88-211ENST00000575976 DDIT4Q9NX09 232 aa8.92□□□□□ -0.98
NUP88-211ENST00000575976 RRN3Q9NYV6 651 aa8.92□□□□□ -0.98
NUP88-211ENST00000575976 COX16Q9P0S2 106 aa8.92□□□□□ -0.98
NUP88-211ENST00000575976 CTTNBP2NLQ9P2B4 639 aa8.92□□□□□ -0.98
NUP88-211ENST00000575976 INTUQ9ULD6 942 aa8.92□□□□□ -0.98
NUP88-211ENST00000575976 TLR6Q9Y2C9 796 aa8.92□□□□□ -0.98
NUP88-211ENST00000575976 SH3BP1Q9Y3L3 701 aa8.92□□□□□ -0.98
NUP88-211ENST00000575976 E2F8A0AVK6 867 aa8.91□□□□□ -0.98
NUP88-211ENST00000575976 ARHGAP6O43182 974 aa8.91□□□□□ -0.98
NUP88-211ENST00000575976 CCP110O43303 1012 aa8.91□□□□□ -0.98
NUP88-211ENST00000575976 ENDOD1O94919 500 aa8.91□□□□□ -0.98
NUP88-211ENST00000575976 PSMC3P17980 439 aa8.91□□□□□ -0.98
NUP88-211ENST00000575976 PSMA2P25787 234 aa8.91□□□□□ -0.98
NUP88-211ENST00000575976 CORO1AP31146 461 aaKnown RBP8.91□□□□□ -0.98
NUP88-211ENST00000575976 GDI1P31150 447 aa8.91□□□□□ -0.98
NUP88-211ENST00000575976 RDXP35241 583 aaKnown RBP8.91□□□□□ -0.98
NUP88-211ENST00000575976 PTPN9P43378 593 aa8.91□□□□□ -0.98
NUP88-211ENST00000575976 KPNA1P52294 538 aaPredicted RBP8.91□□□□□ -0.98
NUP88-211ENST00000575976 ZNF143P52747 638 aaPredicted RBP8.91□□□□□ -0.98
NUP88-211ENST00000575976 KRT83P78385 493 aa8.91□□□□□ -0.98
NUP88-211ENST00000575976 ZNF252P-AS1Q0IIN9 211 aa8.91□□□□□ -0.98
NUP88-211ENST00000575976 FCHO2Q0JRZ9 810 aa8.91□□□□□ -0.98
NUP88-211ENST00000575976 NNTQ13423 1086 aa8.91□□□□□ -0.98
NUP88-211ENST00000575976 ZC3H12AQ5D1E8 599 aaKnown RBP8.91□□□□□ -0.98
NUP88-211ENST00000575976 Q6ZNB5 142 aa8.91□□□□□ -0.98
NUP88-211ENST00000575976 HTR3DQ70Z44 454 aa8.91□□□□□ -0.98
NUP88-211ENST00000575976 RNF135Q8IUD6 432 aa8.91□□□□□ -0.98
NUP88-211ENST00000575976 BBS7Q8IWZ6 715 aa8.91□□□□□ -0.98
NUP88-211ENST00000575976 YAF2Q8IY57 180 aa8.91□□□□□ -0.98
NUP88-211ENST00000575976 SLC35G2Q8TBE7 412 aa8.91□□□□□ -0.98
NUP88-211ENST00000575976 ZNF564Q8TBZ8 553 aaPredicted RBP8.91□□□□□ -0.98
NUP88-211ENST00000575976 FAM172AQ8WUF8 416 aa8.91□□□□□ -0.98
NUP88-211ENST00000575976 CENPIQ92674 756 aaPredicted RBP8.91□□□□□ -0.98
NUP88-211ENST00000575976 PLD4Q96BZ4 506 aa8.91□□□□□ -0.98
NUP88-211ENST00000575976 ZFYVE19Q96K21 471 aa8.91□□□□□ -0.98
NUP88-211ENST00000575976 BTBD6Q96KE9 485 aa8.91□□□□□ -0.98
NUP88-211ENST00000575976 CNPY3Q9BT09 278 aa8.91□□□□□ -0.98
NUP88-211ENST00000575976 TRMT61BQ9BVS5 477 aaKnown RBP8.91□□□□□ -0.98
NUP88-211ENST00000575976 LINC00597Q9H2U6 94 aa8.91□□□□□ -0.98
NUP88-211ENST00000575976 KCNF1Q9H3M0 494 aa8.91□□□□□ -0.98
NUP88-211ENST00000575976 OSGEPQ9NPF4 335 aa8.91□□□□□ -0.98
NUP88-211ENST00000575976 LUC7LQ9NQ29 371 aaKnown RBP8.91□□□□□ -0.98
NUP88-211ENST00000575976 PIGVQ9NUD9 493 aa8.91□□□□□ -0.98
NUP88-211ENST00000575976 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.91□□□□□ -0.98
NUP88-211ENST00000575976 THG1LQ9NWX6 298 aaKnown RBP8.91□□□□□ -0.98
NUP88-211ENST00000575976 UVRAGQ9P2Y5 699 aa8.91□□□□□ -0.98
NUP88-211ENST00000575976 ANAPC7Q9UJX3 599 aa8.91□□□□□ -0.98
NUP88-211ENST00000575976 LSM7Q9UK45 103 aaKnown RBP8.91□□□□□ -0.98
NUP88-211ENST00000575976 WNT6Q9Y6F9 365 aa8.91□□□□□ -0.98
NUP88-211ENST00000575976 ZDBF2Q9HCK1 2354 aa8.91□□□□□ -0.98
NUP88-211ENST00000575976 NUP210Q8TEM1 1887 aaPredicted RBP8.9□□□□□ -0.98
NUP88-211ENST00000575976 A0A0U1RQJ8 604 aa8.9□□□□□ -0.98
NUP88-211ENST00000575976 GOLGA6L7A0A1B0GV03 622 aa8.9□□□□□ -0.98
NUP88-211ENST00000575976 CHADO15335 359 aa8.9□□□□□ -0.98
NUP88-211ENST00000575976 DCXO43602 365 aa8.9□□□□□ -0.98
NUP88-211ENST00000575976 NARSO43776 548 aaKnown RBP8.9□□□□□ -0.98
NUP88-211ENST00000575976 NRDCO43847 1150 aa8.9□□□□□ -0.98
NUP88-211ENST00000575976 MOCS2O96007 188 aaPredicted RBP8.9□□□□□ -0.98
NUP88-211ENST00000575976 F9P00740 461 aa8.9□□□□□ -0.98
NUP88-211ENST00000575976 ARSAP15289 507 aa8.9□□□□□ -0.98
NUP88-211ENST00000575976 CCR1P32246 355 aa8.9□□□□□ -0.98
NUP88-211ENST00000575976 IFNAR2P48551 515 aa8.9□□□□□ -0.98
NUP88-211ENST00000575976 HARS2P49590 506 aaKnown RBP8.9□□□□□ -0.98
NUP88-211ENST00000575976 CXCR3P49682 368 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms