RNA–Protein interactions for RNA: ENST00000575599.5

RPAIN-216, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-216ENST00000575599 ATG2BQ96BY7 2078 aa13.83□□□□□ -0.2
RPAIN-216ENST00000575599 GOLGA6L6A8MZA4 724 aa13.83□□□□□ -0.2
RPAIN-216ENST00000575599 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.83□□□□□ -0.2
RPAIN-216ENST00000575599 ERBB2P04626 1255 aa13.83□□□□□ -0.2
RPAIN-216ENST00000575599 APODP05090 189 aa13.83□□□□□ -0.2
RPAIN-216ENST00000575599 TYRP14679 529 aa13.83□□□□□ -0.2
RPAIN-216ENST00000575599 SOX5P35711 763 aa13.83□□□□□ -0.2
RPAIN-216ENST00000575599 EIF2DP41214 584 aaKnown RBP13.83□□□□□ -0.2
RPAIN-216ENST00000575599 HARS2P49590 506 aaKnown RBP13.83□□□□□ -0.2
RPAIN-216ENST00000575599 JAM2P57087 298 aa13.83□□□□□ -0.2
RPAIN-216ENST00000575599 MESP2Q0VG99 397 aa13.83□□□□□ -0.2
RPAIN-216ENST00000575599 FBXO43Q4G163 708 aa13.83□□□□□ -0.2
RPAIN-216ENST00000575599 OR6B2Q6IFH4 312 aa13.83□□□□□ -0.2
RPAIN-216ENST00000575599 SFTPA1Q8IWL2 248 aa13.83□□□□□ -0.2
RPAIN-216ENST00000575599 RPLP0P6Q8NHW5 317 aa13.83□□□□□ -0.2
RPAIN-216ENST00000575599 ADAM32Q8TC27 787 aa13.83□□□□□ -0.2
RPAIN-216ENST00000575599 EPS8L1Q8TE68 723 aa13.83□□□□□ -0.2
RPAIN-216ENST00000575599 DQX1Q8TE96 717 aaKnown RBP13.83□□□□□ -0.2
RPAIN-216ENST00000575599 TRIM62Q9BVG3 475 aa13.83□□□□□ -0.2
RPAIN-216ENST00000575599 DNAJC17Q9NVM6 304 aaKnown RBP13.83□□□□□ -0.2
RPAIN-216ENST00000575599 PLK2Q9NYY3 685 aa13.83□□□□□ -0.2
RPAIN-216ENST00000575599 DAAM1Q9Y4D1 1078 aa13.83□□□□□ -0.2
RPAIN-216ENST00000575599 CACNA1HO95180 2353 aa13.82□□□□□ -0.2
RPAIN-216ENST00000575599 TEX33O43247 280 aa13.82□□□□□ -0.2
RPAIN-216ENST00000575599 TULP3O75386 442 aa13.82□□□□□ -0.2
RPAIN-216ENST00000575599 KAT7O95251 611 aa13.82□□□□□ -0.2
RPAIN-216ENST00000575599 FYNP06241 537 aa13.82□□□□□ -0.2
RPAIN-216ENST00000575599 MMEP08473 750 aa13.82□□□□□ -0.2
RPAIN-216ENST00000575599 CHKAP35790 457 aa13.82□□□□□ -0.2
RPAIN-216ENST00000575599 NBL1P41271 181 aa13.82□□□□□ -0.2
RPAIN-216ENST00000575599 STAT1P42224 750 aa13.82□□□□□ -0.2
RPAIN-216ENST00000575599 TAF5Q15542 800 aa13.82□□□□□ -0.2
RPAIN-216ENST00000575599 TRIP4Q15650 581 aaPredicted RBP13.82□□□□□ -0.2
RPAIN-216ENST00000575599 ZNF528Q3MIS6 628 aa13.82□□□□□ -0.2
RPAIN-216ENST00000575599 PTPN20Q4JDL3 420 aa13.82□□□□□ -0.2
RPAIN-216ENST00000575599 SYPL2Q5VXT5 272 aa13.82□□□□□ -0.2
RPAIN-216ENST00000575599 ZC3H14Q6PJT7 736 aaKnown RBP13.82□□□□□ -0.2
RPAIN-216ENST00000575599 FAM183BPQ6ZVS7 135 aa13.82□□□□□ -0.2
RPAIN-216ENST00000575599 TAC4Q86UU9 113 aa13.82□□□□□ -0.2
RPAIN-216ENST00000575599 ETFBKMTQ8IXQ9 262 aa13.82□□□□□ -0.2
RPAIN-216ENST00000575599 TMEM35BQ8NCS4 154 aa13.82□□□□□ -0.2
RPAIN-216ENST00000575599 SLC20A1Q8WUM9 679 aa13.82□□□□□ -0.2
RPAIN-216ENST00000575599 DDX1Q92499 740 aaKnown RBP13.82□□□□□ -0.2
RPAIN-216ENST00000575599 MRFAP1L1Q96HT8 127 aa13.82□□□□□ -0.2
RPAIN-216ENST00000575599 NAP1L5Q96NT1 182 aaPredicted RBP13.82□□□□□ -0.2
RPAIN-216ENST00000575599 XPO6Q96QU8 1125 aaKnown RBP13.82□□□□□ -0.2
RPAIN-216ENST00000575599 POPDC2Q9HBU9 364 aa13.82□□□□□ -0.2
RPAIN-216ENST00000575599 POLR3BQ9NW08 1133 aaPredicted RBP13.82□□□□□ -0.2
RPAIN-216ENST00000575599 MARK1Q9P0L2 795 aa13.82□□□□□ -0.2
RPAIN-216ENST00000575599 WDR35Q9P2L0 1181 aa13.82□□□□□ -0.2
RPAIN-216ENST00000575599 DEC1Q9P2X7 70 aa13.82□□□□□ -0.2
RPAIN-216ENST00000575599 MYO15AQ9UKN7 3530 aa13.81□□□□□ -0.2
RPAIN-216ENST00000575599 A0A1B0GTH6 734 aa13.81□□□□□ -0.2
RPAIN-216ENST00000575599 ANTXRLA6NF34 631 aa13.81□□□□□ -0.2
RPAIN-216ENST00000575599 K7EQS6 105 aa13.81□□□□□ -0.2
RPAIN-216ENST00000575599 TRIM24O15164 1050 aa13.81□□□□□ -0.2
RPAIN-216ENST00000575599 AP5Z1O43299 807 aa13.81□□□□□ -0.2
RPAIN-216ENST00000575599 CACNG3O60359 315 aa13.81□□□□□ -0.2
RPAIN-216ENST00000575599 ATG13O75143 517 aa13.81□□□□□ -0.2
RPAIN-216ENST00000575599 GRAP2O75791 330 aa13.81□□□□□ -0.2
RPAIN-216ENST00000575599 GRIA2P42262 883 aa13.81□□□□□ -0.2
RPAIN-216ENST00000575599 TBX4P57082 545 aa13.81□□□□□ -0.2
RPAIN-216ENST00000575599 SNX16P57768 344 aa13.81□□□□□ -0.2
RPAIN-216ENST00000575599 YWHAZP63104 245 aaKnown RBP13.81□□□□□ -0.2
RPAIN-216ENST00000575599 ARID5AQ03989 594 aa13.81□□□□□ -0.2
RPAIN-216ENST00000575599 C2orf27AQ580R0 203 aa13.81□□□□□ -0.2
RPAIN-216ENST00000575599 HEATR6Q6AI08 1181 aaKnown RBP13.81□□□□□ -0.2
RPAIN-216ENST00000575599 GRAMD4Q6IC98 578 aa13.81□□□□□ -0.2
RPAIN-216ENST00000575599 CACNA2D4Q7Z3S7 1137 aa13.81□□□□□ -0.2
RPAIN-216ENST00000575599 SERPINB11Q96P15 392 aa13.81□□□□□ -0.2
RPAIN-216ENST00000575599 NOCTQ9UK39 431 aaKnown RBP13.81□□□□□ -0.2
RPAIN-216ENST00000575599 SLC8A2Q9UPR5 921 aa13.81□□□□□ -0.2
RPAIN-216ENST00000575599 TBC1D3BA6NDS4 549 aa13.8□□□□□ -0.2
RPAIN-216ENST00000575599 TSPAN3O60637 253 aa13.8□□□□□ -0.2
RPAIN-216ENST00000575599 LSM8O95777 96 aaKnown RBP13.8□□□□□ -0.2
RPAIN-216ENST00000575599 CYBBP04839 570 aa13.8□□□□□ -0.2
RPAIN-216ENST00000575599 TDGF1P13385 188 aa13.8□□□□□ -0.2
RPAIN-216ENST00000575599 HOXC13P31276 330 aa13.8□□□□□ -0.2
RPAIN-216ENST00000575599 CDH5P33151 784 aaPredicted RBP13.8□□□□□ -0.2
RPAIN-216ENST00000575599 DMWDQ09019 674 aa13.8□□□□□ -0.2
RPAIN-216ENST00000575599 NR1I3Q14994 352 aa13.8□□□□□ -0.2
RPAIN-216ENST00000575599 PREPLQ4J6C6 727 aaPredicted RBP13.8□□□□□ -0.2
RPAIN-216ENST00000575599 DCAF6Q58WW2 860 aa13.8□□□□□ -0.2
RPAIN-216ENST00000575599 C10orf76Q5T2E6 689 aa13.8□□□□□ -0.2
RPAIN-216ENST00000575599 NAA35Q5VZE5 725 aa13.8□□□□□ -0.2
RPAIN-216ENST00000575599 NUGGCQ68CJ6 796 aa13.8□□□□□ -0.2
RPAIN-216ENST00000575599 OLFML1Q6UWY5 402 aa13.8□□□□□ -0.2
RPAIN-216ENST00000575599 TOGARAM2Q6ZUX3 1019 aa13.8□□□□□ -0.2
RPAIN-216ENST00000575599 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.8□□□□□ -0.2
RPAIN-216ENST00000575599 ALYREFQ86V81 257 aaKnown RBP13.8□□□□□ -0.2
RPAIN-216ENST00000575599 DEFB106AQ8N104 65 aa13.8□□□□□ -0.2
RPAIN-216ENST00000575599 PHTF2Q8N3S3 785 aa13.8□□□□□ -0.2
RPAIN-216ENST00000575599 TERB1Q8NA31 727 aa13.8□□□□□ -0.2
RPAIN-216ENST00000575599 CCDC26Q8TAB7 109 aa13.8□□□□□ -0.2
RPAIN-216ENST00000575599 USP33Q8TEY7 942 aa13.8□□□□□ -0.2
RPAIN-216ENST00000575599 DDI1Q8WTU0 396 aa13.8□□□□□ -0.2
RPAIN-216ENST00000575599 ATRIPQ8WXE1 791 aa13.8□□□□□ -0.2
RPAIN-216ENST00000575599 ACDQ96AP0 544 aa13.8□□□□□ -0.2
RPAIN-216ENST00000575599 P2RY11Q96G91 374 aa13.8□□□□□ -0.2
RPAIN-216ENST00000575599 FAM204AQ9H8W3 233 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms