RNA–Protein interactions for RNA: ENST00000574867.5

NUP88-210, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 2,081 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-210ENST00000574867 MTA1Q13330 715 aa17.78■□□□□ 0.44
NUP88-210ENST00000574867 ACAP1Q15027 740 aa17.78■□□□□ 0.44
NUP88-210ENST00000574867 UNC45BQ8IWX7 931 aa17.78■□□□□ 0.44
NUP88-210ENST00000574867 SLC35G2Q8TBE7 412 aa17.78■□□□□ 0.44
NUP88-210ENST00000574867 ADAMTS19Q8TE59 1207 aa17.78■□□□□ 0.44
NUP88-210ENST00000574867 CENPIQ92674 756 aaPredicted RBP17.78■□□□□ 0.44
NUP88-210ENST00000574867 RSPRY1Q96DX4 576 aa17.78■□□□□ 0.44
NUP88-210ENST00000574867 SLC39A13Q96H72 371 aa17.78■□□□□ 0.44
NUP88-210ENST00000574867 CALR3Q96L12 384 aaKnown RBP17.78■□□□□ 0.44
NUP88-210ENST00000574867 NCAPGQ9BPX3 1015 aa17.78■□□□□ 0.44
NUP88-210ENST00000574867 KXD1Q9BQD3 176 aa17.78■□□□□ 0.44
NUP88-210ENST00000574867 GKN1Q9NS71 199 aa17.78■□□□□ 0.44
NUP88-210ENST00000574867 IP6K2Q9UHH9 426 aa17.78■□□□□ 0.44
NUP88-210ENST00000574867 MYO1FO00160 1098 aa17.78■□□□□ 0.44
NUP88-210ENST00000574867 CCP110O43303 1012 aa17.78■□□□□ 0.44
NUP88-210ENST00000574867 APOEP02649 317 aa17.78■□□□□ 0.44
NUP88-210ENST00000574867 CCR1P32246 355 aa17.78■□□□□ 0.44
NUP88-210ENST00000574867 HARS2P49590 506 aaKnown RBP17.78■□□□□ 0.44
NUP88-210ENST00000574867 ATP11AP98196 1134 aa17.78■□□□□ 0.44
NUP88-210ENST00000574867 OGDHQ02218 1023 aa17.78■□□□□ 0.44
NUP88-210ENST00000574867 FCHO2Q0JRZ9 810 aa17.78■□□□□ 0.44
NUP88-210ENST00000574867 KIF5AQ12840 1032 aa17.78■□□□□ 0.44
NUP88-210ENST00000574867 NME3Q13232 169 aa17.78■□□□□ 0.44
NUP88-210ENST00000574867 PIGHQ14442 188 aaPredicted RBP17.78■□□□□ 0.44
NUP88-210ENST00000574867 C15orf59Q2T9L4 293 aaPredicted RBP17.78■□□□□ 0.44
NUP88-210ENST00000574867 MFSD6LQ8IWD5 586 aa17.78■□□□□ 0.44
NUP88-210ENST00000574867 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.78■□□□□ 0.44
NUP88-210ENST00000574867 FAM172AQ8WUF8 416 aa17.78■□□□□ 0.44
NUP88-210ENST00000574867 FCRL2Q96LA5 508 aaPredicted RBP17.78■□□□□ 0.44
NUP88-210ENST00000574867 TRIM7Q9C029 511 aa17.78■□□□□ 0.44
NUP88-210ENST00000574867 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.78■□□□□ 0.44
NUP88-210ENST00000574867 THG1LQ9NWX6 298 aaKnown RBP17.78■□□□□ 0.44
NUP88-210ENST00000574867 ZNF510Q9Y2H8 683 aa17.78■□□□□ 0.44
NUP88-210ENST00000574867 SYNJ2BP-COX16A0A087WUM0 186 aa17.77■□□□□ 0.44
NUP88-210ENST00000574867 C19orf67A6NJJ6 358 aa17.77■□□□□ 0.44
NUP88-210ENST00000574867 LATS1O95835 1130 aa17.77■□□□□ 0.44
NUP88-210ENST00000574867 HMBSP08397 361 aa17.77■□□□□ 0.44
NUP88-210ENST00000574867 PSMC3P17980 439 aa17.77■□□□□ 0.44
NUP88-210ENST00000574867 TFE3P19532 575 aaPredicted RBP17.77■□□□□ 0.44
NUP88-210ENST00000574867 HADHBP55084 474 aaKnown RBP17.77■□□□□ 0.44
NUP88-210ENST00000574867 ZNF252P-AS1Q0IIN9 211 aa17.77■□□□□ 0.44
NUP88-210ENST00000574867 PPP2R5DQ14738 602 aa17.77■□□□□ 0.44
NUP88-210ENST00000574867 CDO1Q16878 200 aa17.77■□□□□ 0.44
NUP88-210ENST00000574867 BRMS1LQ5PSV4 323 aa17.77■□□□□ 0.44
NUP88-210ENST00000574867 CC2D1AQ6P1N0 951 aaPredicted RBP17.77■□□□□ 0.44
NUP88-210ENST00000574867 VITQ6UXI7 678 aa17.77■□□□□ 0.44
NUP88-210ENST00000574867 HTR3DQ70Z44 454 aa17.77■□□□□ 0.44
NUP88-210ENST00000574867 NIPA2Q8N8Q9 360 aa17.77■□□□□ 0.44
NUP88-210ENST00000574867 ADAM33Q9BZ11 813 aa17.77■□□□□ 0.44
NUP88-210ENST00000574867 TSGA10Q9BZW7 698 aa17.77■□□□□ 0.44
NUP88-210ENST00000574867 KCNK12Q9HB15 430 aa17.77■□□□□ 0.44
NUP88-210ENST00000574867 OSGEPQ9NPF4 335 aa17.77■□□□□ 0.44
NUP88-210ENST00000574867 PIGVQ9NUD9 493 aa17.77■□□□□ 0.44
NUP88-210ENST00000574867 COX16Q9P0S2 106 aa17.77■□□□□ 0.44
NUP88-210ENST00000574867 TBC1D14Q9P2M4 693 aa17.77■□□□□ 0.44
NUP88-210ENST00000574867 LIMD1Q9UGP4 676 aa17.77■□□□□ 0.44
NUP88-210ENST00000574867 SLC9A3R1O14745 358 aaPredicted RBP17.76■□□□□ 0.43
NUP88-210ENST00000574867 RNF8O76064 485 aa17.76■□□□□ 0.43
NUP88-210ENST00000574867 CORO1AP31146 461 aaKnown RBP17.76■□□□□ 0.43
NUP88-210ENST00000574867 CXCR3P49682 368 aa17.76■□□□□ 0.43
NUP88-210ENST00000574867 TJAP1Q5JTD0 557 aa17.76■□□□□ 0.43
NUP88-210ENST00000574867 YAF2Q8IY57 180 aa17.76■□□□□ 0.43
NUP88-210ENST00000574867 TTC16Q8NEE8 873 aa17.76■□□□□ 0.43
NUP88-210ENST00000574867 RIN3Q8TB24 985 aa17.76■□□□□ 0.43
NUP88-210ENST00000574867 RNF34Q969K3 372 aa17.76■□□□□ 0.43
NUP88-210ENST00000574867 CALCOCO1Q9P1Z2 691 aa17.76■□□□□ 0.43
NUP88-210ENST00000574867 RCCD1A6NED2 376 aa17.76■□□□□ 0.43
NUP88-210ENST00000574867 GREM1O60565 184 aa17.76■□□□□ 0.43
NUP88-210ENST00000574867 ARHGAP25P42331 645 aa17.76■□□□□ 0.43
NUP88-210ENST00000574867 ARHGAP29Q52LW3 1261 aa17.76■□□□□ 0.43
NUP88-210ENST00000574867 Q6ZNB5 142 aa17.76■□□□□ 0.43
NUP88-210ENST00000574867 AZIN2Q96A70 460 aa17.76■□□□□ 0.43
NUP88-210ENST00000574867 OTUB2Q96DC9 234 aa17.76■□□□□ 0.43
NUP88-210ENST00000574867 LRRC3BQ96PB8 259 aa17.76■□□□□ 0.43
NUP88-210ENST00000574867 TFR2Q9UP52 801 aa17.76■□□□□ 0.43
NUP88-210ENST00000574867 HDAC4P56524 1084 aa17.75■□□□□ 0.43
NUP88-210ENST00000574867 ZC3H12AQ5D1E8 599 aaKnown RBP17.75■□□□□ 0.43
NUP88-210ENST00000574867 BTN2A3PQ96KV6 586 aa17.75■□□□□ 0.43
NUP88-210ENST00000574867 ZNF830Q96NB3 372 aaPredicted RBP17.75■□□□□ 0.43
NUP88-210ENST00000574867 TRMT61BQ9BVS5 477 aaKnown RBP17.75■□□□□ 0.43
NUP88-210ENST00000574867 LACRTQ9GZZ8 138 aa17.75■□□□□ 0.43
NUP88-210ENST00000574867 WDCPQ9H6R7 721 aa17.75■□□□□ 0.43
NUP88-210ENST00000574867 SLC12A6Q9UHW9 1150 aa17.75■□□□□ 0.43
NUP88-210ENST00000574867 PROSCO94903 275 aa17.75■□□□□ 0.43
NUP88-210ENST00000574867 MAN1A1P33908 653 aa17.75■□□□□ 0.43
NUP88-210ENST00000574867 NOP2P46087 812 aaKnown RBP17.75■□□□□ 0.43
NUP88-210ENST00000574867 SLC11A2P49281 568 aa17.75■□□□□ 0.43
NUP88-210ENST00000574867 SH3PXD2AQ5TCZ1 1133 aa17.75■□□□□ 0.43
NUP88-210ENST00000574867 ZNF662Q6ZS27 426 aa17.75■□□□□ 0.43
NUP88-210ENST00000574867 ATP6V0D2Q8N8Y2 350 aa17.75■□□□□ 0.43
NUP88-210ENST00000574867 OSCP1Q8WVF1 389 aa17.75■□□□□ 0.43
NUP88-210ENST00000574867 PLA2G2FQ9BZM2 168 aa17.75■□□□□ 0.43
NUP88-210ENST00000574867 ARHGEF38Q9NXL2 777 aa17.75■□□□□ 0.43
NUP88-210ENST00000574867 KCNU1A8MYU2 1149 aa17.74■□□□□ 0.43
NUP88-210ENST00000574867 KRT86O43790 486 aa17.74■□□□□ 0.43
NUP88-210ENST00000574867 KLKB1P03952 638 aa17.74■□□□□ 0.43
NUP88-210ENST00000574867 PCK1P35558 622 aa17.74■□□□□ 0.43
NUP88-210ENST00000574867 IFNAR2P48551 515 aa17.74■□□□□ 0.43
NUP88-210ENST00000574867 GRM2Q14416 872 aa17.74■□□□□ 0.43
NUP88-210ENST00000574867 PDGFRLQ15198 375 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms