RNA–Protein interactions for RNA: ENST00000574755.5

VPS33B-208, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 2,356 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-208ENST00000574755 CNGB3Q9NQW8 809 aa14.55□□□□□ -0.08
VPS33B-208ENST00000574755 ARHGEF4Q9NR80 690 aa14.55□□□□□ -0.08
VPS33B-208ENST00000574755 TEX264Q9Y6I9 313 aa14.55□□□□□ -0.08
VPS33B-208ENST00000574755 BRCC3P46736 316 aa14.54□□□□□ -0.08
VPS33B-208ENST00000574755 YWHAGP61981 247 aaKnown RBP eCLIP14.54□□□□□ -0.08
VPS33B-208ENST00000574755 SP3Q02447 781 aa14.54□□□□□ -0.08
VPS33B-208ENST00000574755 SF3A3Q12874 501 aaKnown RBP eCLIP14.54□□□□□ -0.08
VPS33B-208ENST00000574755 DSC3Q14574 896 aa14.54□□□□□ -0.08
VPS33B-208ENST00000574755 BZW1Q7L1Q6 419 aaKnown RBP14.54□□□□□ -0.08
VPS33B-208ENST00000574755 BNIPLQ7Z465 357 aa14.54□□□□□ -0.08
VPS33B-208ENST00000574755 METTL23Q86XA0 190 aa14.54□□□□□ -0.08
VPS33B-208ENST00000574755 C4orf33Q8N1A6 199 aa14.54□□□□□ -0.08
VPS33B-208ENST00000574755 ANKS4BQ8N8V4 417 aa14.54□□□□□ -0.08
VPS33B-208ENST00000574755 CCDC197Q8NCU1 140 aa14.54□□□□□ -0.08
VPS33B-208ENST00000574755 ADAM32Q8TC27 787 aa14.54□□□□□ -0.08
VPS33B-208ENST00000574755 TFB1MQ8WVM0 346 aaKnown RBP14.54□□□□□ -0.08
VPS33B-208ENST00000574755 CKAP2Q8WWK9 683 aa14.54□□□□□ -0.08
VPS33B-208ENST00000574755 SGSM3Q96HU1 749 aa14.54□□□□□ -0.08
VPS33B-208ENST00000574755 ELAC2Q9BQ52 826 aaKnown RBP14.54□□□□□ -0.08
VPS33B-208ENST00000574755 RHOBTB2Q9BYZ6 727 aa14.54□□□□□ -0.08
VPS33B-208ENST00000574755 H3BRJ5 948 aa14.54□□□□□ -0.08
VPS33B-208ENST00000574755 GCATO75600 419 aa14.54□□□□□ -0.08
VPS33B-208ENST00000574755 METTL18O95568 372 aa14.54□□□□□ -0.08
VPS33B-208ENST00000574755 FYNP06241 537 aa14.54□□□□□ -0.08
VPS33B-208ENST00000574755 NCAM1P13591 858 aa14.54□□□□□ -0.08
VPS33B-208ENST00000574755 MSH2P43246 934 aa14.54□□□□□ -0.08
VPS33B-208ENST00000574755 GRIK3Q13003 919 aa14.54□□□□□ -0.08
VPS33B-208ENST00000574755 RAB41Q5JT25 222 aa14.54□□□□□ -0.08
VPS33B-208ENST00000574755 NUGGCQ68CJ6 796 aa14.54□□□□□ -0.08
VPS33B-208ENST00000574755 MYLPFQ96A32 169 aa14.54□□□□□ -0.08
VPS33B-208ENST00000574755 CYTH2Q99418 400 aa14.54□□□□□ -0.08
VPS33B-208ENST00000574755 PAIP2Q9BPZ3 127 aaKnown RBP14.54□□□□□ -0.08
VPS33B-208ENST00000574755 THSD7BQ9C0I4 1608 aa14.54□□□□□ -0.08
VPS33B-208ENST00000574755 GOLGA6L7A0A1B0GV03 622 aa14.53□□□□□ -0.08
VPS33B-208ENST00000574755 A0A1W2PPM1 405 aa14.53□□□□□ -0.08
VPS33B-208ENST00000574755 TCRBV9S1A1TA0A576 114 aa14.53□□□□□ -0.08
VPS33B-208ENST00000574755 PRPF4O43172 522 aaKnown RBP eCLIP14.53□□□□□ -0.08
VPS33B-208ENST00000574755 MFSD11O43934 449 aa14.53□□□□□ -0.08
VPS33B-208ENST00000574755 TUSC3Q13454 348 aa14.53□□□□□ -0.08
VPS33B-208ENST00000574755 ADGRD1Q6QNK2 874 aa14.53□□□□□ -0.08
VPS33B-208ENST00000574755 CCDC121Q6ZUS5 278 aa14.53□□□□□ -0.08
VPS33B-208ENST00000574755 CTU1Q7Z7A3 348 aaKnown RBP14.53□□□□□ -0.08
VPS33B-208ENST00000574755 PIGWQ7Z7B1 504 aa14.53□□□□□ -0.08
VPS33B-208ENST00000574755 RNF180Q86T96 592 aa14.53□□□□□ -0.08
VPS33B-208ENST00000574755 HTR3CQ8WXA8 447 aa14.53□□□□□ -0.08
VPS33B-208ENST00000574755 OLFM3Q96PB7 478 aa14.53□□□□□ -0.08
VPS33B-208ENST00000574755 TGS1Q96RS0 853 aaKnown RBP14.53□□□□□ -0.08
VPS33B-208ENST00000574755 RTP3Q9BQQ7 232 aa14.53□□□□□ -0.08
VPS33B-208ENST00000574755 FGFR1OP2Q9NVK5 253 aa14.53□□□□□ -0.08
VPS33B-208ENST00000574755 SMG5Q9UPR3 1016 aaKnown RBP14.53□□□□□ -0.08
VPS33B-208ENST00000574755 SPAG6O75602 509 aa14.53□□□□□ -0.08
VPS33B-208ENST00000574755 LTFP02788 710 aa14.53□□□□□ -0.08
VPS33B-208ENST00000574755 MAGEA6P43360 314 aa14.53□□□□□ -0.08
VPS33B-208ENST00000574755 MAGEA9P43362 315 aa14.53□□□□□ -0.08
VPS33B-208ENST00000574755 LIG3P49916 1009 aa14.53□□□□□ -0.08
VPS33B-208ENST00000574755 IL9RQ01113 521 aa14.53□□□□□ -0.08
VPS33B-208ENST00000574755 CAND1Q86VP6 1230 aaKnown RBP14.53□□□□□ -0.08
VPS33B-208ENST00000574755 AGGF1Q8N302 714 aaeCLIP14.53□□□□□ -0.08
VPS33B-208ENST00000574755 CFAP36Q96G28 342 aa14.53□□□□□ -0.08
VPS33B-208ENST00000574755 MAGEB18Q96M61 343 aa14.53□□□□□ -0.08
VPS33B-208ENST00000574755 LGMNQ99538 433 aa14.53□□□□□ -0.08
VPS33B-208ENST00000574755 ACBD6Q9BR61 282 aa14.53□□□□□ -0.08
VPS33B-208ENST00000574755 DHRS4Q9BTZ2 278 aa14.53□□□□□ -0.08
VPS33B-208ENST00000574755 NR2E3Q9Y5X4 410 aa14.53□□□□□ -0.08
VPS33B-208ENST00000574755 IKBKGQ9Y6K9 419 aa14.53□□□□□ -0.08
VPS33B-208ENST00000574755 HACD1B0YJ81 288 aa14.52□□□□□ -0.08
VPS33B-208ENST00000574755 EEF2KO00418 725 aaKnown RBP14.52□□□□□ -0.08
VPS33B-208ENST00000574755 AOC2O75106 756 aa14.52□□□□□ -0.08
VPS33B-208ENST00000574755 DGKIO75912 1065 aa14.52□□□□□ -0.08
VPS33B-208ENST00000574755 SKIP12755 728 aa14.52□□□□□ -0.08
VPS33B-208ENST00000574755 KRT4P19013 534 aa14.52□□□□□ -0.08
VPS33B-208ENST00000574755 CA4P22748 312 aa14.52□□□□□ -0.08
VPS33B-208ENST00000574755 BDNFP23560 247 aa14.52□□□□□ -0.08
VPS33B-208ENST00000574755 GBP2P32456 591 aaPredicted RBP14.52□□□□□ -0.08
VPS33B-208ENST00000574755 ACLYP53396 1101 aa14.52□□□□□ -0.08
VPS33B-208ENST00000574755 NOGQ13253 232 aa14.52□□□□□ -0.08
VPS33B-208ENST00000574755 NETO2Q8NC67 525 aa14.52□□□□□ -0.08
VPS33B-208ENST00000574755 SLC9A7Q96T83 725 aa14.52□□□□□ -0.08
VPS33B-208ENST00000574755 PRDM16Q9HAZ2 1276 aa14.52□□□□□ -0.08
VPS33B-208ENST00000574755 DDIT4Q9NX09 232 aa14.52□□□□□ -0.08
VPS33B-208ENST00000574755 HHLA1C9JL84 531 aa14.52□□□□□ -0.09
VPS33B-208ENST00000574755 CYP11A1P05108 521 aa14.52□□□□□ -0.09
VPS33B-208ENST00000574755 VAV1P15498 845 aa14.52□□□□□ -0.09
VPS33B-208ENST00000574755 YY1P25490 414 aa14.52□□□□□ -0.09
VPS33B-208ENST00000574755 RPA3P35244 121 aaPredicted RBP14.52□□□□□ -0.09
VPS33B-208ENST00000574755 ADRA1BP35368 520 aa14.52□□□□□ -0.09
VPS33B-208ENST00000574755 AIF1P55008 147 aa14.52□□□□□ -0.09
VPS33B-208ENST00000574755 WDR4P57081 412 aaKnown RBP14.52□□□□□ -0.09
VPS33B-208ENST00000574755 AP1B1Q10567 949 aa14.52□□□□□ -0.09
VPS33B-208ENST00000574755 ZKSCAN8Q15776 578 aaPredicted RBP14.52□□□□□ -0.09
VPS33B-208ENST00000574755 TRIM71Q2Q1W2 868 aaKnown RBP14.52□□□□□ -0.09
VPS33B-208ENST00000574755 KBTBD12Q3ZCT8 623 aa14.52□□□□□ -0.09
VPS33B-208ENST00000574755 INTS6LQ5JSJ4 861 aaKnown RBP14.52□□□□□ -0.09
VPS33B-208ENST00000574755 DCAKDQ8WVC6 231 aa14.52□□□□□ -0.09
VPS33B-208ENST00000574755 EDEM1Q92611 657 aa14.52□□□□□ -0.09
VPS33B-208ENST00000574755 CSNK1G1Q9HCP0 422 aa14.52□□□□□ -0.09
VPS33B-208ENST00000574755 ZC3H7BQ9UGR2 993 aaKnown RBP14.52□□□□□ -0.09
VPS33B-208ENST00000574755 DSEQ9UL01 958 aa14.52□□□□□ -0.09
VPS33B-208ENST00000574755 C9IYK1 514 aa14.51□□□□□ -0.09
VPS33B-208ENST00000574755 CABYRO75952 493 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms