RNA–Protein interactions for RNA: ENST00000574218.1

CTNS-208, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 5

Gene CTNS, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-208ENST00000574218 RASAL2Q9UJF2 1139 aa12.55□□□□□ -0.4
CTNS-208ENST00000574218 FBXO2Q9UK22 296 aaPredicted RBP12.55□□□□□ -0.4
CTNS-208ENST00000574218 NAGPAQ9UK23 515 aa12.55□□□□□ -0.4
CTNS-208ENST00000574218 FBXO10Q9UK96 956 aa12.55□□□□□ -0.4
CTNS-208ENST00000574218 SCML2Q9UQR0 700 aa12.55□□□□□ -0.4
CTNS-208ENST00000574218 PCDHA5Q9Y5H7 936 aa12.55□□□□□ -0.4
CTNS-208ENST00000574218 CLIC4Q9Y696 253 aa12.55□□□□□ -0.4
CTNS-208ENST00000574218 PTPRQQ9UMZ3 2332 aa12.55□□□□□ -0.4
CTNS-208ENST00000574218 A0A1W2PQH9 124 aa12.54□□□□□ -0.4
CTNS-208ENST00000574218 CYP26A1O43174 497 aa12.54□□□□□ -0.4
CTNS-208ENST00000574218 PCDHGA12O60330 932 aa12.54□□□□□ -0.4
CTNS-208ENST00000574218 GREM1O60565 184 aa12.54□□□□□ -0.4
CTNS-208ENST00000574218 FSBPO95073 299 aa12.54□□□□□ -0.4
CTNS-208ENST00000574218 SEMA4FO95754 770 aa12.54□□□□□ -0.4
CTNS-208ENST00000574218 CDK4P11802 303 aa12.54□□□□□ -0.4
CTNS-208ENST00000574218 PLA2G2AP14555 144 aa12.54□□□□□ -0.4
CTNS-208ENST00000574218 ACO1P21399 889 aaKnown RBP12.54□□□□□ -0.4
CTNS-208ENST00000574218 PRKCHP24723 683 aa12.54□□□□□ -0.4
CTNS-208ENST00000574218 ADORA2BP29275 332 aa12.54□□□□□ -0.4
CTNS-208ENST00000574218 PSEN1P49768 467 aa12.54□□□□□ -0.4
CTNS-208ENST00000574218 COPAP53621 1224 aa12.54□□□□□ -0.4
CTNS-208ENST00000574218 AP3M2P53677 418 aa12.54□□□□□ -0.4
CTNS-208ENST00000574218 BCAT1P54687 386 aa12.54□□□□□ -0.4
CTNS-208ENST00000574218 SNRPFP62306 86 aaKnown RBP12.54□□□□□ -0.4
CTNS-208ENST00000574218 ASIC1P78348 528 aa12.54□□□□□ -0.4
CTNS-208ENST00000574218 COG7P83436 770 aa12.54□□□□□ -0.4
CTNS-208ENST00000574218 IL9RQ01113 521 aa12.54□□□□□ -0.4
CTNS-208ENST00000574218 AMPD3Q01432 767 aa12.54□□□□□ -0.4
CTNS-208ENST00000574218 SEMG2Q02383 582 aa12.54□□□□□ -0.4
CTNS-208ENST00000574218 PTPRNQ16849 979 aa12.54□□□□□ -0.4
CTNS-208ENST00000574218 TTC31Q49AM3 519 aaPredicted RBP12.54□□□□□ -0.4
CTNS-208ENST00000574218 FNDC3BQ53EP0 1204 aaKnown RBP12.54□□□□□ -0.4
CTNS-208ENST00000574218 Q6ZNB5 142 aa12.54□□□□□ -0.4
CTNS-208ENST00000574218 DDI1Q8WTU0 396 aa12.54□□□□□ -0.4
CTNS-208ENST00000574218 BTBD1Q9H0C5 482 aa12.54□□□□□ -0.4
CTNS-208ENST00000574218 XYLT2Q9H1B5 865 aa12.54□□□□□ -0.4
CTNS-208ENST00000574218 TNMDQ9H2S6 317 aa12.54□□□□□ -0.4
CTNS-208ENST00000574218 C6orf106Q9H6K1 298 aaPredicted RBP12.54□□□□□ -0.4
CTNS-208ENST00000574218 VRTNQ9H8Y1 702 aa12.54□□□□□ -0.4
CTNS-208ENST00000574218 OSGEPQ9NPF4 335 aa12.54□□□□□ -0.4
CTNS-208ENST00000574218 AGPAT3Q9NRZ7 376 aa12.54□□□□□ -0.4
CTNS-208ENST00000574218 FAM49BQ9NUQ9 324 aa12.54□□□□□ -0.4
CTNS-208ENST00000574218 NUDT5Q9UKK9 219 aa12.54□□□□□ -0.4
CTNS-208ENST00000574218 PCDHGA1Q9Y5H4 931 aa12.54□□□□□ -0.4
CTNS-208ENST00000574218 UBE4BO95155 1302 aa12.54□□□□□ -0.4
CTNS-208ENST00000574218 H0Y8X5 98 aa12.53□□□□□ -0.4
CTNS-208ENST00000574218 KCNK3O14649 394 aa12.53□□□□□ -0.4
CTNS-208ENST00000574218 ENC1O14682 589 aa12.53□□□□□ -0.4
CTNS-208ENST00000574218 TIMM44O43615 452 aa12.53□□□□□ -0.4
CTNS-208ENST00000574218 STX6O43752 255 aa12.53□□□□□ -0.4
CTNS-208ENST00000574218 EXOC3O60645 756 aa12.53□□□□□ -0.4
CTNS-208ENST00000574218 STC2O76061 302 aa12.53□□□□□ -0.4
CTNS-208ENST00000574218 BEST1O76090 585 aa12.53□□□□□ -0.4
CTNS-208ENST00000574218 PENKP01210 267 aaPredicted RBP12.53□□□□□ -0.4
CTNS-208ENST00000574218 DNTTP04053 509 aa12.53□□□□□ -0.4
CTNS-208ENST00000574218 HMBSP08397 361 aa12.53□□□□□ -0.4
CTNS-208ENST00000574218 ABCB4P21439 1286 aa12.53□□□□□ -0.4
CTNS-208ENST00000574218 ITPKBP27987 946 aa12.53□□□□□ -0.4
CTNS-208ENST00000574218 CORO1AP31146 461 aaKnown RBP12.53□□□□□ -0.4
CTNS-208ENST00000574218 EIF2S3P41091 472 aaKnown RBP12.53□□□□□ -0.4
CTNS-208ENST00000574218 PGFP49763 221 aa12.53□□□□□ -0.4
CTNS-208ENST00000574218 CEBPZQ03701 1054 aaKnown RBP12.53□□□□□ -0.4
CTNS-208ENST00000574218 NCOA4Q13772 614 aa12.53□□□□□ -0.4
CTNS-208ENST00000574218 ENPP2Q13822 863 aa12.53□□□□□ -0.4
CTNS-208ENST00000574218 FAM26FQ5R3K3 315 aa12.53□□□□□ -0.4
CTNS-208ENST00000574218 FYB2Q5VWT5 728 aa12.53□□□□□ -0.4
CTNS-208ENST00000574218 NELFCDQ8IXH7 590 aa12.53□□□□□ -0.4
CTNS-208ENST00000574218 PDILTQ8N807 584 aa12.53□□□□□ -0.4
CTNS-208ENST00000574218 ZMIZ2Q8NF64 920 aa12.53□□□□□ -0.4
CTNS-208ENST00000574218 C1orf216Q8TAB5 229 aa12.53□□□□□ -0.4
CTNS-208ENST00000574218 ZNF507Q8TCN5 953 aa12.53□□□□□ -0.4
CTNS-208ENST00000574218 HPS3Q969F9 1004 aa12.53□□□□□ -0.4
CTNS-208ENST00000574218 ACE2Q9BYF1 805 aaPredicted RBP12.53□□□□□ -0.4
CTNS-208ENST00000574218 SLC2A11Q9BYW1 496 aa12.53□□□□□ -0.4
CTNS-208ENST00000574218 PRORYQ9H606 182 aa12.53□□□□□ -0.4
CTNS-208ENST00000574218 FBRSQ9HAH7 460 aa12.53□□□□□ -0.4
CTNS-208ENST00000574218 CSNK1G1Q9HCP0 422 aa12.53□□□□□ -0.4
CTNS-208ENST00000574218 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.53□□□□□ -0.4
CTNS-208ENST00000574218 STRIP2Q9ULQ0 834 aa12.53□□□□□ -0.4
CTNS-208ENST00000574218 PLA2G4CQ9UP65 541 aa12.53□□□□□ -0.4
CTNS-208ENST00000574218 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.53□□□□□ -0.4
CTNS-208ENST00000574218 KALRNO60229 2985 aa12.52□□□□□ -0.4
CTNS-208ENST00000574218 RFPL3O75679 317 aa12.52□□□□□ -0.41
CTNS-208ENST00000574218 KIF20AO95235 890 aa12.52□□□□□ -0.41
CTNS-208ENST00000574218 LDOC1O95751 146 aaPredicted RBP12.52□□□□□ -0.41
CTNS-208ENST00000574218 ITGAVP06756 1048 aa12.52□□□□□ -0.41
CTNS-208ENST00000574218 CD27P26842 260 aa12.52□□□□□ -0.41
CTNS-208ENST00000574218 ACSL1P33121 698 aa12.52□□□□□ -0.41
CTNS-208ENST00000574218 NDST1P52848 882 aa12.52□□□□□ -0.41
CTNS-208ENST00000574218 BMT2Q1RMZ1 405 aa12.52□□□□□ -0.41
CTNS-208ENST00000574218 RSRC2Q7L4I2 434 aaKnown RBP12.52□□□□□ -0.41
CTNS-208ENST00000574218 GPR155Q7Z3F1 870 aa12.52□□□□□ -0.41
CTNS-208ENST00000574218 UNC93AQ86WB7 457 aa12.52□□□□□ -0.41
CTNS-208ENST00000574218 GANCQ8TET4 914 aa12.52□□□□□ -0.41
CTNS-208ENST00000574218 ZNF516Q92618 1163 aa12.52□□□□□ -0.41
CTNS-208ENST00000574218 CNDP2Q96KP4 475 aaKnown RBP12.52□□□□□ -0.41
CTNS-208ENST00000574218 NMUR1Q9HB89 426 aa12.52□□□□□ -0.41
CTNS-208ENST00000574218 PNPLA8Q9NP80 782 aa12.52□□□□□ -0.41
CTNS-208ENST00000574218 OSER1Q9NX31 292 aa12.52□□□□□ -0.41
CTNS-208ENST00000574218 CGNQ9P2M7 1197 aaKnown RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms