RNA–Protein interactions for RNA: ENST00000573827.1

SMG6-214, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-214ENST00000573827 STRIP2Q9ULQ0 834 aa18.22■□□□□ 0.51
SMG6-214ENST00000573827 HBS1LQ9Y450 684 aaKnown RBP18.22■□□□□ 0.51
SMG6-214ENST00000573827 NUP205Q92621 2012 aa18.22■□□□□ 0.51
SMG6-214ENST00000573827 THADAQ6YHU6 1953 aa18.21■□□□□ 0.51
SMG6-214ENST00000573827 BCLAF3A2AJT9 711 aaKnown RBP18.21■□□□□ 0.51
SMG6-214ENST00000573827 PIK3R2O00459 728 aa18.21■□□□□ 0.51
SMG6-214ENST00000573827 LCP1P13796 627 aa18.21■□□□□ 0.51
SMG6-214ENST00000573827 GABRG2P18507 467 aa18.21■□□□□ 0.51
SMG6-214ENST00000573827 SLC9A1P19634 815 aa18.21■□□□□ 0.51
SMG6-214ENST00000573827 NTSR1P30989 418 aa18.21■□□□□ 0.51
SMG6-214ENST00000573827 CHKAP35790 457 aa18.21■□□□□ 0.51
SMG6-214ENST00000573827 MPLP40238 635 aa18.21■□□□□ 0.51
SMG6-214ENST00000573827 ENPP2Q13822 863 aa18.21■□□□□ 0.51
SMG6-214ENST00000573827 MEA1Q16626 185 aa18.21■□□□□ 0.51
SMG6-214ENST00000573827 GEN1Q17RS7 908 aa18.21■□□□□ 0.51
SMG6-214ENST00000573827 USP39Q53GS9 565 aaKnown RBP18.21■□□□□ 0.51
SMG6-214ENST00000573827 KIAA1211LQ6NV74 962 aa18.21■□□□□ 0.51
SMG6-214ENST00000573827 DENND1BQ6P3S1 775 aa18.21■□□□□ 0.51
SMG6-214ENST00000573827 NETO1Q8TDF5 533 aa18.21■□□□□ 0.51
SMG6-214ENST00000573827 RLN3Q8WXF3 142 aa18.21■□□□□ 0.51
SMG6-214ENST00000573827 UBE2TQ9NPD8 197 aaPredicted RBP18.21■□□□□ 0.51
SMG6-214ENST00000573827 ABCC13Q9NSE7 274 aa18.21■□□□□ 0.51
SMG6-214ENST00000573827 OLA1Q9NTK5 396 aaKnown RBP18.21■□□□□ 0.51
SMG6-214ENST00000573827 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.2■□□□□ 0.5
SMG6-214ENST00000573827 TCRBV21S2A2A0A5A6 115 aa18.2■□□□□ 0.5
SMG6-214ENST00000573827 GTPBP10A4D1E9 387 aaKnown RBP18.2■□□□□ 0.5
SMG6-214ENST00000573827 MSI1O43347 362 aaKnown RBP18.2■□□□□ 0.5
SMG6-214ENST00000573827 FGFR1OPO95684 399 aaKnown RBP18.2■□□□□ 0.5
SMG6-214ENST00000573827 SDHBP21912 280 aa18.2■□□□□ 0.5
SMG6-214ENST00000573827 WASP42768 502 aa18.2■□□□□ 0.5
SMG6-214ENST00000573827 DPCR1Q3MIW9 517 aa18.2■□□□□ 0.5
SMG6-214ENST00000573827 TRMT11Q7Z4G4 463 aaKnown RBP18.2■□□□□ 0.5
SMG6-214ENST00000573827 HMGB4Q8WW32 186 aa18.2■□□□□ 0.5
SMG6-214ENST00000573827 RTKNQ9BST9 563 aa18.2■□□□□ 0.5
SMG6-214ENST00000573827 SLC4A5Q9BY07 1137 aa18.2■□□□□ 0.5
SMG6-214ENST00000573827 POLMQ9NP87 494 aaPredicted RBP18.2■□□□□ 0.5
SMG6-214ENST00000573827 SIX2Q9NPC8 291 aa18.2■□□□□ 0.5
SMG6-214ENST00000573827 AJAP1Q9UKB5 411 aaPredicted RBP18.2■□□□□ 0.5
SMG6-214ENST00000573827 CDV3Q9UKY7 258 aaKnown RBP18.2■□□□□ 0.5
SMG6-214ENST00000573827 TM4SF5O14894 197 aa18.19■□□□□ 0.5
SMG6-214ENST00000573827 FOXD2O60548 495 aaPredicted RBP18.19■□□□□ 0.5
SMG6-214ENST00000573827 ALDH1A2O94788 518 aa18.19■□□□□ 0.5
SMG6-214ENST00000573827 RHOBTB1O94844 696 aa18.19■□□□□ 0.5
SMG6-214ENST00000573827 HOXB2P14652 356 aa18.19■□□□□ 0.5
SMG6-214ENST00000573827 PON1P27169 355 aa18.19■□□□□ 0.5
SMG6-214ENST00000573827 HOXD9P28356 352 aaPredicted RBP18.19■□□□□ 0.5
SMG6-214ENST00000573827 LIMK1P53667 647 aa18.19■□□□□ 0.5
SMG6-214ENST00000573827 ELF2Q15723 593 aa18.19■□□□□ 0.5
SMG6-214ENST00000573827 CACNA1EQ15878 2313 aa18.19■□□□□ 0.5
SMG6-214ENST00000573827 TMEM215Q68D42 235 aa18.19■□□□□ 0.5
SMG6-214ENST00000573827 TCEAL6Q6IPX3 200 aa18.19■□□□□ 0.5
SMG6-214ENST00000573827 C11orf74Q86VG3 221 aa18.19■□□□□ 0.5
SMG6-214ENST00000573827 STK32AQ8WU08 396 aa18.19■□□□□ 0.5
SMG6-214ENST00000573827 ZNF606Q8WXB4 792 aa18.19■□□□□ 0.5
SMG6-214ENST00000573827 SHC3Q92529 594 aa18.19■□□□□ 0.5
SMG6-214ENST00000573827 TCEAL3Q969E4 200 aa18.19■□□□□ 0.5
SMG6-214ENST00000573827 VPS45Q9NRW7 570 aa18.19■□□□□ 0.5
SMG6-214ENST00000573827 LMBRD1Q9NUN5 540 aa18.19■□□□□ 0.5
SMG6-214ENST00000573827 PI4KAP42356 2102 aa18.19■□□□□ 0.5
SMG6-214ENST00000573827 TNRC6BQ9UPQ9 1833 aaKnown RBP18.19■□□□□ 0.5
SMG6-214ENST00000573827 DCDC2BA2VCK2 349 aa18.18■□□□□ 0.5
SMG6-214ENST00000573827 WASH3PC4AMC7 463 aa18.18■□□□□ 0.5
SMG6-214ENST00000573827 FBXO21O94952 628 aa18.18■□□□□ 0.5
SMG6-214ENST00000573827 LATS1O95835 1130 aa18.18■□□□□ 0.5
SMG6-214ENST00000573827 LTFP02788 710 aa18.18■□□□□ 0.5
SMG6-214ENST00000573827 SGSHP51688 502 aa18.18■□□□□ 0.5
SMG6-214ENST00000573827 MIIPQ5JXC2 388 aa18.18■□□□□ 0.5
SMG6-214ENST00000573827 NUDT18Q6ZVK8 323 aa18.18■□□□□ 0.5
SMG6-214ENST00000573827 ENOSF1Q7L5Y1 443 aa18.18■□□□□ 0.5
SMG6-214ENST00000573827 TMEM110Q86TL2 294 aa18.18■□□□□ 0.5
SMG6-214ENST00000573827 WDTC1Q8N5D0 677 aa18.18■□□□□ 0.5
SMG6-214ENST00000573827 IPO4Q8TEX9 1081 aaKnown RBP18.18■□□□□ 0.5
SMG6-214ENST00000573827 RNF139Q8WU17 664 aa18.18■□□□□ 0.5
SMG6-214ENST00000573827 CACNA2D2Q9NY47 1150 aa18.18■□□□□ 0.5
SMG6-214ENST00000573827 CALCOCO1Q9P1Z2 691 aa18.18■□□□□ 0.5
SMG6-214ENST00000573827 THAP10Q9P2Z0 257 aaPredicted RBP18.18■□□□□ 0.5
SMG6-214ENST00000573827 APEX2Q9UBZ4 518 aa18.18■□□□□ 0.5
SMG6-214ENST00000573827 CKAP5Q14008 2032 aa18.17■□□□□ 0.5
SMG6-214ENST00000573827 PAPSS1O43252 624 aaPredicted RBP18.17■□□□□ 0.5
SMG6-214ENST00000573827 KRT5P13647 590 aa18.17■□□□□ 0.5
SMG6-214ENST00000573827 NDUFV2P19404 249 aa18.17■□□□□ 0.5
SMG6-214ENST00000573827 GBP1P32455 592 aa18.17■□□□□ 0.5
SMG6-214ENST00000573827 FAM133BQ5BKY9 247 aaKnown RBP18.17■□□□□ 0.5
SMG6-214ENST00000573827 ADGRF1Q5T601 910 aa18.17■□□□□ 0.5
SMG6-214ENST00000573827 SMYD5Q6GMV2 418 aa18.17■□□□□ 0.5
SMG6-214ENST00000573827 GBP6Q6ZN66 633 aa18.17■□□□□ 0.5
SMG6-214ENST00000573827 BEND5Q7L4P6 421 aa18.17■□□□□ 0.5
SMG6-214ENST00000573827 KIAA0907Q7Z7F0 614 aaPredicted RBP18.17■□□□□ 0.5
SMG6-214ENST00000573827 SCUBE3Q8IX30 993 aa18.17■□□□□ 0.5
SMG6-214ENST00000573827 CHPFQ8IZ52 775 aa18.17■□□□□ 0.5
SMG6-214ENST00000573827 DQX1Q8TE96 717 aaKnown RBP18.17■□□□□ 0.5
SMG6-214ENST00000573827 SLC39A13Q96H72 371 aa18.17■□□□□ 0.5
SMG6-214ENST00000573827 SLC2A11Q9BYW1 496 aa18.17■□□□□ 0.5
SMG6-214ENST00000573827 THAP9Q9H5L6 903 aa18.17■□□□□ 0.5
SMG6-214ENST00000573827 TJP2Q9UDY2 1190 aa18.17■□□□□ 0.5
SMG6-214ENST00000573827 RAD54BQ9Y620 910 aa18.17■□□□□ 0.5
SMG6-214ENST00000573827 KNL1Q8NG31 2342 aa18.17■□□□□ 0.5
SMG6-214ENST00000573827 FRYQ5TBA9 3013 aa18.16■□□□□ 0.5
SMG6-214ENST00000573827 LETM1O95202 739 aaPredicted RBP18.16■□□□□ 0.5
SMG6-214ENST00000573827 C7P10643 843 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms