RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 SCUBE3Q8IX30 993 aa16.15■□□□□ 0.18
NUP88-207ENST00000573584 GSTCDQ8NEC7 633 aa16.15■□□□□ 0.18
NUP88-207ENST00000573584 DDX50Q9BQ39 737 aaKnown RBP16.15■□□□□ 0.18
NUP88-207ENST00000573584 ECSITQ9BQ95 431 aa16.15■□□□□ 0.18
NUP88-207ENST00000573584 GPAMQ9HCL2 828 aa16.15■□□□□ 0.18
NUP88-207ENST00000573584 PDP2Q9P2J9 529 aa16.15■□□□□ 0.18
NUP88-207ENST00000573584 DNAJC16Q9Y2G8 782 aa16.15■□□□□ 0.18
NUP88-207ENST00000573584 A0A088AWK7 358 aa16.15■□□□□ 0.18
NUP88-207ENST00000573584 ARHGAP42A6NI28 874 aa16.15■□□□□ 0.18
NUP88-207ENST00000573584 ITM2AO43736 263 aa16.15■□□□□ 0.18
NUP88-207ENST00000573584 TPSB2P20231 275 aa16.15■□□□□ 0.18
NUP88-207ENST00000573584 SLC25A3Q00325 362 aa16.15■□□□□ 0.18
NUP88-207ENST00000573584 HIC1Q14526 733 aa16.15■□□□□ 0.18
NUP88-207ENST00000573584 TPSAB1Q15661 275 aa16.15■□□□□ 0.18
NUP88-207ENST00000573584 OLFML1Q6UWY5 402 aa16.15■□□□□ 0.18
NUP88-207ENST00000573584 NCAPG2Q86XI2 1143 aa16.15■□□□□ 0.18
NUP88-207ENST00000573584 CCNJLQ8IV13 435 aa16.15■□□□□ 0.18
NUP88-207ENST00000573584 UNC5BQ8IZJ1 945 aa16.15■□□□□ 0.18
NUP88-207ENST00000573584 GALNT15Q8N3T1 639 aa16.15■□□□□ 0.18
NUP88-207ENST00000573584 KLRG1Q96E93 195 aa16.15■□□□□ 0.18
NUP88-207ENST00000573584 TRAPPC9Q96Q05 1148 aa16.15■□□□□ 0.18
NUP88-207ENST00000573584 NT5C1AQ9BXI3 368 aa16.15■□□□□ 0.18
NUP88-207ENST00000573584 MOCS1Q9NZB8 636 aa16.15■□□□□ 0.18
NUP88-207ENST00000573584 BTBD7Q9P203 1132 aa16.15■□□□□ 0.18
NUP88-207ENST00000573584 KIAA1257Q9ULG3 409 aa16.15■□□□□ 0.18
NUP88-207ENST00000573584 GJA3Q9Y6H8 435 aa16.15■□□□□ 0.18
NUP88-207ENST00000573584 DPYSL4O14531 572 aa16.15■□□□□ 0.18
NUP88-207ENST00000573584 USP1O94782 785 aa16.15■□□□□ 0.18
NUP88-207ENST00000573584 GSRP00390 522 aa16.15■□□□□ 0.18
NUP88-207ENST00000573584 LYNP07948 512 aa16.15■□□□□ 0.18
NUP88-207ENST00000573584 ZCCHC18P0CG32 403 aa16.15■□□□□ 0.18
NUP88-207ENST00000573584 CNTFP26441 200 aa16.15■□□□□ 0.18
NUP88-207ENST00000573584 RPL10AP62906 217 aaKnown RBP16.15■□□□□ 0.18
NUP88-207ENST00000573584 ROR2Q01974 943 aaKnown RBP16.15■□□□□ 0.18
NUP88-207ENST00000573584 INCA1Q0VD86 236 aa16.15■□□□□ 0.18
NUP88-207ENST00000573584 SLC10A2Q12908 348 aaPredicted RBP16.15■□□□□ 0.18
NUP88-207ENST00000573584 GOLGA7BQ2TAP0 167 aa16.15■□□□□ 0.18
NUP88-207ENST00000573584 TMCO4Q5TGY1 634 aa16.15■□□□□ 0.18
NUP88-207ENST00000573584 MBLAC2Q68D91 279 aa16.15■□□□□ 0.18
NUP88-207ENST00000573584 CASC4Q6P4E1 433 aa16.15■□□□□ 0.18
NUP88-207ENST00000573584 LBX2Q6XYB7 198 aa16.15■□□□□ 0.18
NUP88-207ENST00000573584 PLPPR4Q7Z2D5 763 aa16.15■□□□□ 0.18
NUP88-207ENST00000573584 USP6NLQ92738 828 aa16.15■□□□□ 0.18
NUP88-207ENST00000573584 SIKE1Q9BRV8 207 aa16.15■□□□□ 0.18
NUP88-207ENST00000573584 APOBEC2Q9Y235 224 aaKnown RBP16.15■□□□□ 0.18
NUP88-207ENST00000573584 MDM4O15151 490 aa16.14■□□□□ 0.17
NUP88-207ENST00000573584 FKBP6O75344 327 aa16.14■□□□□ 0.17
NUP88-207ENST00000573584 LGR5O75473 907 aa16.14■□□□□ 0.17
NUP88-207ENST00000573584 KCNA4P22459 653 aa16.14■□□□□ 0.17
NUP88-207ENST00000573584 CRABP2P29373 138 aa16.14■□□□□ 0.17
NUP88-207ENST00000573584 SLC1A6P48664 564 aa16.14■□□□□ 0.17
NUP88-207ENST00000573584 SARNPP82979 210 aaKnown RBP16.14■□□□□ 0.17
NUP88-207ENST00000573584 NBPF20Q3BBV1 942 aa16.14■□□□□ 0.17
NUP88-207ENST00000573584 SLC10A6Q3KNW5 377 aa16.14■□□□□ 0.17
NUP88-207ENST00000573584 N4BP2L1Q5TBK1 243 aaPredicted RBP16.14■□□□□ 0.17
NUP88-207ENST00000573584 KCNT2Q6UVM3 1135 aa16.14■□□□□ 0.17
NUP88-207ENST00000573584 FGD4Q96M96 766 aa16.14■□□□□ 0.17
NUP88-207ENST00000573584 ZNF778Q96MU6 729 aa16.14■□□□□ 0.17
NUP88-207ENST00000573584 ASB7Q9H672 318 aa16.14■□□□□ 0.17
NUP88-207ENST00000573584 DESP17661 470 aa16.14■□□□□ 0.17
NUP88-207ENST00000573584 POLE2P56282 527 aa16.14■□□□□ 0.17
NUP88-207ENST00000573584 HDAC4P56524 1084 aa16.14■□□□□ 0.17
NUP88-207ENST00000573584 SLC6A3Q01959 620 aa16.14■□□□□ 0.17
NUP88-207ENST00000573584 TEDDM1Q5T9Z0 273 aa16.14■□□□□ 0.17
NUP88-207ENST00000573584 CWF19L1Q69YN2 538 aaKnown RBP16.14■□□□□ 0.17
NUP88-207ENST00000573584 KHSRPQ92945 711 aaKnown RBP eCLIP16.14■□□□□ 0.17
NUP88-207ENST00000573584 GBP5Q96PP8 586 aa16.14■□□□□ 0.17
NUP88-207ENST00000573584 GCOM2Q9BZD3 368 aaPredicted RBP16.14■□□□□ 0.17
NUP88-207ENST00000573584 PRMT7Q9NVM4 692 aaPredicted RBP16.14■□□□□ 0.17
NUP88-207ENST00000573584 WDR27A2RRH5 827 aa16.13■□□□□ 0.17
NUP88-207ENST00000573584 KLHL2O95198 593 aa16.13■□□□□ 0.17
NUP88-207ENST00000573584 ADORA2AP29274 412 aa16.13■□□□□ 0.17
NUP88-207ENST00000573584 PDE1BQ01064 536 aa16.13■□□□□ 0.17
NUP88-207ENST00000573584 TUBB3Q13509 450 aa16.13■□□□□ 0.17
NUP88-207ENST00000573584 TMEM132DQ14C87 1099 aa16.13■□□□□ 0.17
NUP88-207ENST00000573584 STXBP5Q5T5C0 1151 aa16.13■□□□□ 0.17
NUP88-207ENST00000573584 PPP1R26Q5T8A7 1209 aaPredicted RBP16.13■□□□□ 0.17
NUP88-207ENST00000573584 MFN1Q8IWA4 741 aa16.13■□□□□ 0.17
NUP88-207ENST00000573584 POU5F2Q8N7G0 328 aa16.13■□□□□ 0.17
NUP88-207ENST00000573584 SHKBP1Q8TBC3 707 aa16.13■□□□□ 0.17
NUP88-207ENST00000573584 SPATA33Q96N06 139 aa16.13■□□□□ 0.17
NUP88-207ENST00000573584 PPP1R16BQ96T49 567 aa16.13■□□□□ 0.17
NUP88-207ENST00000573584 DHX35Q9H5Z1 703 aaKnown RBP16.13■□□□□ 0.17
NUP88-207ENST00000573584 SLC17A6Q9P2U8 582 aa16.13■□□□□ 0.17
NUP88-207ENST00000573584 EMCNQ9ULC0 261 aa16.13■□□□□ 0.17
NUP88-207ENST00000573584 F5H423 210 aaPredicted RBP16.13■□□□□ 0.17
NUP88-207ENST00000573584 ALDOAP04075 364 aaKnown RBP16.13■□□□□ 0.17
NUP88-207ENST00000573584 MCF2P10911 925 aa16.13■□□□□ 0.17
NUP88-207ENST00000573584 FGF3P11487 239 aaPredicted RBP16.13■□□□□ 0.17
NUP88-207ENST00000573584 TFE3P19532 575 aaPredicted RBP16.13■□□□□ 0.17
NUP88-207ENST00000573584 CRADDP78560 199 aa16.13■□□□□ 0.17
NUP88-207ENST00000573584 TNFAIP2Q03169 654 aa16.13■□□□□ 0.17
NUP88-207ENST00000573584 CDC16Q13042 620 aa16.13■□□□□ 0.17
NUP88-207ENST00000573584 PRKG1Q13976 671 aa16.13■□□□□ 0.17
NUP88-207ENST00000573584 EFHC1Q5JVL4 640 aa16.13■□□□□ 0.17
NUP88-207ENST00000573584 CELF3Q5SZQ8 465 aaKnown RBP16.13■□□□□ 0.17
NUP88-207ENST00000573584 TREML2Q5T2D2 321 aa16.13■□□□□ 0.17
NUP88-207ENST00000573584 CYS1Q717R9 158 aa16.13■□□□□ 0.17
NUP88-207ENST00000573584 RIOX2Q8IUF8 465 aa16.13■□□□□ 0.17
NUP88-207ENST00000573584 ATP2A3Q93084 1043 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms