RNA–Protein interactions for RNA: ENST00000571688.5

LITAF-209, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-209ENST00000571688 KCTD6Q8NC69 237 aa17.34■□□□□ 0.37
LITAF-209ENST00000571688 PPP4R1Q8TF05 950 aa17.34■□□□□ 0.37
LITAF-209ENST00000571688 TBC1D22BQ9NU19 505 aa17.34■□□□□ 0.37
LITAF-209ENST00000571688 ZBTB14O43829 449 aa17.34■□□□□ 0.37
LITAF-209ENST00000571688 ARRB2P32121 409 aa17.34■□□□□ 0.37
LITAF-209ENST00000571688 ALDH3B2P48448 385 aa17.34■□□□□ 0.37
LITAF-209ENST00000571688 ACOT2P49753 483 aa17.34■□□□□ 0.37
LITAF-209ENST00000571688 MRPS22P82650 360 aaKnown RBP17.34■□□□□ 0.37
LITAF-209ENST00000571688 KLF10Q13118 480 aa17.34■□□□□ 0.37
LITAF-209ENST00000571688 WDR81Q562E7 1941 aa17.34■□□□□ 0.37
LITAF-209ENST00000571688 PATL1Q86TB9 770 aaKnown RBP17.34■□□□□ 0.37
LITAF-209ENST00000571688 LDHDQ86WU2 507 aa17.34■□□□□ 0.37
LITAF-209ENST00000571688 FNIP1Q8TF40 1166 aa17.34■□□□□ 0.37
LITAF-209ENST00000571688 LRRC39Q96DD0 335 aa17.34■□□□□ 0.37
LITAF-209ENST00000571688 TRIM56Q9BRZ2 755 aaKnown RBP17.34■□□□□ 0.37
LITAF-209ENST00000571688 PICK1Q9NRD5 415 aa17.34■□□□□ 0.37
LITAF-209ENST00000571688 FAF1Q9UNN5 650 aaPredicted RBP17.34■□□□□ 0.37
LITAF-209ENST00000571688 A0A1B0GTW7 788 aa17.34■□□□□ 0.37
LITAF-209ENST00000571688 BOLA2-SMG1P6H3BVE0 249 aa17.34■□□□□ 0.37
LITAF-209ENST00000571688 PLIN3O60664 434 aa17.34■□□□□ 0.37
LITAF-209ENST00000571688 DKC1O60832 514 aaKnown RBP eCLIP17.34■□□□□ 0.37
LITAF-209ENST00000571688 IDO1P14902 403 aa17.34■□□□□ 0.37
LITAF-209ENST00000571688 MPP3Q13368 585 aa17.34■□□□□ 0.37
LITAF-209ENST00000571688 FAM182AQ5T1J6 154 aa17.34■□□□□ 0.37
LITAF-209ENST00000571688 N4BP2L1Q5TBK1 243 aaPredicted RBP17.34■□□□□ 0.37
LITAF-209ENST00000571688 GSDMBQ8TAX9 411 aa17.34■□□□□ 0.37
LITAF-209ENST00000571688 KBTBD7Q8WVZ9 684 aa17.34■□□□□ 0.37
LITAF-209ENST00000571688 CNKSR2Q8WXI2 1034 aa17.34■□□□□ 0.37
LITAF-209ENST00000571688 HAUS8Q9BT25 410 aa17.34■□□□□ 0.37
LITAF-209ENST00000571688 COPS7BQ9H9Q2 264 aaPredicted RBP17.34■□□□□ 0.37
LITAF-209ENST00000571688 PACSIN3Q9UKS6 424 aa17.34■□□□□ 0.37
LITAF-209ENST00000571688 THRAP10827 490 aa17.33■□□□□ 0.36
LITAF-209ENST00000571688 PORP16435 677 aaPredicted RBP17.33■□□□□ 0.36
LITAF-209ENST00000571688 EIF4BP23588 611 aaKnown RBP17.33■□□□□ 0.36
LITAF-209ENST00000571688 HOXA10P31260 410 aaPredicted RBP17.33■□□□□ 0.36
LITAF-209ENST00000571688 MRPS9P82933 396 aaKnown RBP17.33■□□□□ 0.36
LITAF-209ENST00000571688 MTMR1Q13613 665 aa17.33■□□□□ 0.36
LITAF-209ENST00000571688 TAF5Q15542 800 aa17.33■□□□□ 0.36
LITAF-209ENST00000571688 FSCBQ5H9T9 825 aa17.33■□□□□ 0.36
LITAF-209ENST00000571688 PACS1Q6VY07 963 aa17.33■□□□□ 0.36
LITAF-209ENST00000571688 SLC35B4Q969S0 331 aa17.33■□□□□ 0.36
LITAF-209ENST00000571688 SERPINI1Q99574 410 aa17.33■□□□□ 0.36
LITAF-209ENST00000571688 PLGRKTQ9HBL7 147 aa17.33■□□□□ 0.36
LITAF-209ENST00000571688 HEMK1Q9Y5R4 338 aaPredicted RBP17.33■□□□□ 0.36
LITAF-209ENST00000571688 KANSL1LA0AUZ9 987 aa17.33■□□□□ 0.36
LITAF-209ENST00000571688 GLRA3O75311 464 aa17.33■□□□□ 0.36
LITAF-209ENST00000571688 TRPA1O75762 1119 aa17.33■□□□□ 0.36
LITAF-209ENST00000571688 ITGBL1O95965 494 aaPredicted RBP17.33■□□□□ 0.36
LITAF-209ENST00000571688 KRT3P12035 628 aa17.33■□□□□ 0.36
LITAF-209ENST00000571688 GRK2P25098 689 aa17.33■□□□□ 0.36
LITAF-209ENST00000571688 MAGEA6P43360 314 aa17.33■□□□□ 0.36
LITAF-209ENST00000571688 LIG4P49917 911 aa17.33■□□□□ 0.36
LITAF-209ENST00000571688 CHERPQ8IWX8 916 aaKnown RBP17.33■□□□□ 0.36
LITAF-209ENST00000571688 TSPAN14Q8NG11 270 aa17.33■□□□□ 0.36
LITAF-209ENST00000571688 CHURC1Q8WUH1 139 aa17.33■□□□□ 0.36
LITAF-209ENST00000571688 SDCBP2Q9H190 292 aa17.33■□□□□ 0.36
LITAF-209ENST00000571688 RSAD1Q9HA92 442 aa17.33■□□□□ 0.36
LITAF-209ENST00000571688 PCSK1NQ9UHG2 260 aa17.33■□□□□ 0.36
LITAF-209ENST00000571688 AGO2Q9UKV8 859 aaKnown RBP17.33■□□□□ 0.36
LITAF-209ENST00000571688 PCDHGC3Q9UN70 934 aa17.33■□□□□ 0.36
LITAF-209ENST00000571688 PRSS51A0A1B0GVH4 220 aa17.32■□□□□ 0.36
LITAF-209ENST00000571688 NPM3O75607 178 aaKnown RBP17.32■□□□□ 0.36
LITAF-209ENST00000571688 CCNE2O96020 404 aa17.32■□□□□ 0.36
LITAF-209ENST00000571688 CNTFP26441 200 aa17.32■□□□□ 0.36
LITAF-209ENST00000571688 HARS2P49590 506 aaKnown RBP17.32■□□□□ 0.36
LITAF-209ENST00000571688 FLOT2Q14254 428 aa17.32■□□□□ 0.36
LITAF-209ENST00000571688 DOK7Q18PE1 504 aa17.32■□□□□ 0.36
LITAF-209ENST00000571688 SCARA3Q6AZY7 606 aa17.32■□□□□ 0.36
LITAF-209ENST00000571688 ACER1Q8TDN7 264 aa17.32■□□□□ 0.36
LITAF-209ENST00000571688 ACMSDQ8TDX5 336 aa17.32■□□□□ 0.36
LITAF-209ENST00000571688 RTP4Q96DX8 246 aa17.32■□□□□ 0.36
LITAF-209ENST00000571688 CSRNP1Q96S65 589 aa17.32■□□□□ 0.36
LITAF-209ENST00000571688 CGRRF1Q99675 332 aa17.32■□□□□ 0.36
LITAF-209ENST00000571688 PKP2Q99959 881 aa17.32■□□□□ 0.36
LITAF-209ENST00000571688 SLX1AQ9BQ83 275 aa17.32■□□□□ 0.36
LITAF-209ENST00000571688 CALN1Q9BXU9 219 aa17.32■□□□□ 0.36
LITAF-209ENST00000571688 LIN28AQ9H9Z2 209 aaKnown RBP17.32■□□□□ 0.36
LITAF-209ENST00000571688 INIPQ9NRY2 104 aa17.32■□□□□ 0.36
LITAF-209ENST00000571688 RBAKQ9NYW8 714 aaPredicted RBP17.32■□□□□ 0.36
LITAF-209ENST00000571688 ZNF711Q9Y462 761 aa17.32■□□□□ 0.36
LITAF-209ENST00000571688 STYXL1Q9Y6J8 313 aa17.32■□□□□ 0.36
LITAF-209ENST00000571688 WDR64B1ANS9 1081 aa17.32■□□□□ 0.36
LITAF-209ENST00000571688 PSMC3P17980 439 aa17.32■□□□□ 0.36
LITAF-209ENST00000571688 MAGEA3P43357 314 aa17.32■□□□□ 0.36
LITAF-209ENST00000571688 JAK3P52333 1124 aa17.32■□□□□ 0.36
LITAF-209ENST00000571688 THOP1P52888 689 aa17.32■□□□□ 0.36
LITAF-209ENST00000571688 PDK1Q15118 436 aa17.32■□□□□ 0.36
LITAF-209ENST00000571688 ZNF423Q2M1K9 1284 aa17.32■□□□□ 0.36
LITAF-209ENST00000571688 PTPN20Q4JDL3 420 aa17.32■□□□□ 0.36
LITAF-209ENST00000571688 FAXCQ5TGI0 409 aa17.32■□□□□ 0.36
LITAF-209ENST00000571688 NCCRP1Q6ZVX7 275 aaPredicted RBP17.32■□□□□ 0.36
LITAF-209ENST00000571688 C10orf107Q8IVU9 208 aa17.32■□□□□ 0.36
LITAF-209ENST00000571688 OR5B17Q8NGF7 314 aa17.32■□□□□ 0.36
LITAF-209ENST00000571688 HSPH1Q92598 858 aa17.32■□□□□ 0.36
LITAF-209ENST00000571688 TMIGD2Q96BF3 282 aa17.32■□□□□ 0.36
LITAF-209ENST00000571688 ZC3H12CQ9C0D7 883 aaKnown RBP17.32■□□□□ 0.36
LITAF-209ENST00000571688 HAPLN2Q9GZV7 340 aa17.32■□□□□ 0.36
LITAF-209ENST00000571688 RRN3Q9NYV6 651 aa17.32■□□□□ 0.36
LITAF-209ENST00000571688 VPS28Q9UK41 221 aa17.32■□□□□ 0.36
LITAF-209ENST00000571688 CNOT11Q9UKZ1 510 aaKnown RBP17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms