RNA–Protein interactions for RNA: ENST00000571442.5

SMG6-209, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-209ENST00000571442 IRAK2O43187 625 aa7.28□□□□□ -1.24
SMG6-209ENST00000571442 ATMINO43313 823 aaPredicted RBP7.28□□□□□ -1.24
SMG6-209ENST00000571442 DAB1O75553 588 aa7.28□□□□□ -1.24
SMG6-209ENST00000571442 TRUB2O95900 331 aaKnown RBP7.28□□□□□ -1.24
SMG6-209ENST00000571442 EGFP01133 1207 aa7.28□□□□□ -1.24
SMG6-209ENST00000571442 TNFAIP3P21580 790 aa7.28□□□□□ -1.24
SMG6-209ENST00000571442 GGCXP38435 758 aa7.28□□□□□ -1.24
SMG6-209ENST00000571442 ZNF75DP51815 510 aa7.28□□□□□ -1.24
SMG6-209ENST00000571442 ADKP55263 362 aaKnown RBP7.28□□□□□ -1.24
SMG6-209ENST00000571442 TBX4P57082 545 aa7.28□□□□□ -1.24
SMG6-209ENST00000571442 RNASE9P60153 205 aaKnown RBP7.28□□□□□ -1.24
SMG6-209ENST00000571442 YWHAZP63104 245 aaKnown RBP7.28□□□□□ -1.24
SMG6-209ENST00000571442 ZBED6P86452 979 aa7.28□□□□□ -1.24
SMG6-209ENST00000571442 OGDHQ02218 1023 aa7.28□□□□□ -1.24
SMG6-209ENST00000571442 DCAF6Q58WW2 860 aa7.28□□□□□ -1.24
SMG6-209ENST00000571442 FAM133BQ5BKY9 247 aaKnown RBP7.28□□□□□ -1.24
SMG6-209ENST00000571442 ZC3H12AQ5D1E8 599 aaKnown RBP7.28□□□□□ -1.24
SMG6-209ENST00000571442 FAM102AQ5T9C2 384 aaPredicted RBP7.28□□□□□ -1.24
SMG6-209ENST00000571442 SH3PXD2AQ5TCZ1 1133 aa7.28□□□□□ -1.24
SMG6-209ENST00000571442 FYB2Q5VWT5 728 aa7.28□□□□□ -1.24
SMG6-209ENST00000571442 ASTLQ6HA08 431 aaPredicted RBP7.28□□□□□ -1.24
SMG6-209ENST00000571442 TPGS1Q6ZTW0 290 aa7.28□□□□□ -1.24
SMG6-209ENST00000571442 BEND5Q7L4P6 421 aa7.28□□□□□ -1.24
SMG6-209ENST00000571442 BNIPLQ7Z465 357 aa7.28□□□□□ -1.24
SMG6-209ENST00000571442 DDX42Q86XP3 938 aaKnown RBP eCLIP7.28□□□□□ -1.24
SMG6-209ENST00000571442 PHF13Q86YI8 300 aaPredicted RBP7.28□□□□□ -1.24
SMG6-209ENST00000571442 ETFBKMTQ8IXQ9 262 aa7.28□□□□□ -1.24
SMG6-209ENST00000571442 FAM217AQ8IXS0 508 aa7.28□□□□□ -1.24
SMG6-209ENST00000571442 MCOLN2Q8IZK6 566 aa7.28□□□□□ -1.24
SMG6-209ENST00000571442 CPA6Q8N4T0 437 aa7.28□□□□□ -1.24
SMG6-209ENST00000571442 NAT16Q8N8M0 369 aa7.28□□□□□ -1.24
SMG6-209ENST00000571442 WFDC5Q8TCV5 224 aa7.28□□□□□ -1.24
SMG6-209ENST00000571442 IPO4Q8TEX9 1081 aaKnown RBP7.28□□□□□ -1.24
SMG6-209ENST00000571442 ATP2A3Q93084 1043 aa7.28□□□□□ -1.24
SMG6-209ENST00000571442 BHMTQ93088 406 aa7.28□□□□□ -1.24
SMG6-209ENST00000571442 PLD4Q96BZ4 506 aa7.28□□□□□ -1.24
SMG6-209ENST00000571442 CFAP57Q96MR6 1250 aa7.28□□□□□ -1.24
SMG6-209ENST00000571442 PRICKLE1Q96MT3 831 aaPredicted RBP7.28□□□□□ -1.24
SMG6-209ENST00000571442 CDK5RAP1Q96SZ6 601 aaKnown RBP7.28□□□□□ -1.24
SMG6-209ENST00000571442 TBCBQ99426 244 aa7.28□□□□□ -1.24
SMG6-209ENST00000571442 NPY6RQ99463 290 aa7.28□□□□□ -1.24
SMG6-209ENST00000571442 NUP58Q9BVL2 599 aa7.28□□□□□ -1.24
SMG6-209ENST00000571442 MAGEB5Q9BZ81 275 aa7.28□□□□□ -1.24
SMG6-209ENST00000571442 TRIM7Q9C029 511 aa7.28□□□□□ -1.24
SMG6-209ENST00000571442 NUCKS1Q9H1E3 243 aaKnown RBP7.28□□□□□ -1.24
SMG6-209ENST00000571442 SYNCQ9H7C4 482 aa7.28□□□□□ -1.24
SMG6-209ENST00000571442 C8orf33Q9H7E9 229 aaPredicted RBP7.28□□□□□ -1.24
SMG6-209ENST00000571442 ZDHHC4Q9NPG8 344 aa7.28□□□□□ -1.24
SMG6-209ENST00000571442 SPHK2Q9NRA0 654 aa7.28□□□□□ -1.24
SMG6-209ENST00000571442 OLA1Q9NTK5 396 aaKnown RBP7.28□□□□□ -1.24
SMG6-209ENST00000571442 ASNSD1Q9NWL6 643 aa7.28□□□□□ -1.24
SMG6-209ENST00000571442 PLK2Q9NYY3 685 aa7.28□□□□□ -1.24
SMG6-209ENST00000571442 COX16Q9P0S2 106 aa7.28□□□□□ -1.24
SMG6-209ENST00000571442 NENFQ9UMX5 172 aa7.28□□□□□ -1.24
SMG6-209ENST00000571442 HBS1LQ9Y450 684 aaKnown RBP7.28□□□□□ -1.24
SMG6-209ENST00000571442 CEP83Q9Y592 693 aa7.28□□□□□ -1.24
SMG6-209ENST00000571442 SNX10Q9Y5X0 201 aa7.28□□□□□ -1.24
SMG6-209ENST00000571442 ZFHX2Q9C0A1 2572 aaPredicted RBP7.28□□□□□ -1.24
SMG6-209ENST00000571442 USP34Q70CQ2 3546 aa7.28□□□□□ -1.24
SMG6-209ENST00000571442 SPTBN4Q9H254 2564 aa7.27□□□□□ -1.25
SMG6-209ENST00000571442 A0A087X0T9 212 aa7.27□□□□□ -1.25
SMG6-209ENST00000571442 STK25O00506 426 aa7.27□□□□□ -1.25
SMG6-209ENST00000571442 CAPN9O14815 690 aa7.27□□□□□ -1.25
SMG6-209ENST00000571442 HOXC11O43248 304 aaPredicted RBP7.27□□□□□ -1.25
SMG6-209ENST00000571442 SART1O43290 800 aaKnown RBP7.27□□□□□ -1.25
SMG6-209ENST00000571442 CBFA2T2O43439 604 aa7.27□□□□□ -1.25
SMG6-209ENST00000571442 TSPAN3O60637 253 aa7.27□□□□□ -1.25
SMG6-209ENST00000571442 HSF2BPO75031 334 aa7.27□□□□□ -1.25
SMG6-209ENST00000571442 MFAP3LO75121 409 aa7.27□□□□□ -1.25
SMG6-209ENST00000571442 NFATC1O95644 943 aa7.27□□□□□ -1.25
SMG6-209ENST00000571442 MOCS2O96007 188 aaPredicted RBP7.27□□□□□ -1.25
SMG6-209ENST00000571442 GLI1P08151 1106 aa7.27□□□□□ -1.25
SMG6-209ENST00000571442 FAM228BP0C875 321 aa7.27□□□□□ -1.25
SMG6-209ENST00000571442 ADH5P11766 374 aa7.27□□□□□ -1.25
SMG6-209ENST00000571442 RRM1P23921 792 aa7.27□□□□□ -1.25
SMG6-209ENST00000571442 HNRNPH3P31942 346 aaKnown RBP7.27□□□□□ -1.25
SMG6-209ENST00000571442 IRAK1P51617 712 aa7.27□□□□□ -1.25
SMG6-209ENST00000571442 CLCN5P51795 746 aa7.27□□□□□ -1.25
SMG6-209ENST00000571442 GSCP56915 257 aaPredicted RBP7.27□□□□□ -1.25
SMG6-209ENST00000571442 RPL7AP62424 266 aaKnown RBP7.27□□□□□ -1.25
SMG6-209ENST00000571442 COG7P83436 770 aa7.27□□□□□ -1.25
SMG6-209ENST00000571442 KDSRQ06136 332 aa7.27□□□□□ -1.25
SMG6-209ENST00000571442 KLHL30Q0D2K2 578 aa7.27□□□□□ -1.25
SMG6-209ENST00000571442 ZNF252P-AS1Q0IIN9 211 aa7.27□□□□□ -1.25
SMG6-209ENST00000571442 CCINQ13939 588 aa7.27□□□□□ -1.25
SMG6-209ENST00000571442 ARID5BQ14865 1188 aa7.27□□□□□ -1.25
SMG6-209ENST00000571442 C15orf59Q2T9L4 293 aaPredicted RBP7.27□□□□□ -1.25
SMG6-209ENST00000571442 CCDC14Q49A88 953 aa7.27□□□□□ -1.25
SMG6-209ENST00000571442 TMEM196Q5HYL7 178 aa7.27□□□□□ -1.25
SMG6-209ENST00000571442 EFHC1Q5JVL4 640 aa7.27□□□□□ -1.25
SMG6-209ENST00000571442 PPP1R15BQ5SWA1 713 aa7.27□□□□□ -1.25
SMG6-209ENST00000571442 EMC10Q5UCC4 262 aa7.27□□□□□ -1.25
SMG6-209ENST00000571442 SPECC1LQ69YQ0 1117 aa7.27□□□□□ -1.25
SMG6-209ENST00000571442 ACAD10Q6JQN1 1059 aa7.27□□□□□ -1.25
SMG6-209ENST00000571442 RFWD3Q6PCD5 774 aa7.27□□□□□ -1.25
SMG6-209ENST00000571442 ZNF852Q6ZMS4 543 aa7.27□□□□□ -1.25
SMG6-209ENST00000571442 TRIM72Q6ZMU5 477 aa7.27□□□□□ -1.25
SMG6-209ENST00000571442 TOGARAM2Q6ZUX3 1019 aa7.27□□□□□ -1.25
SMG6-209ENST00000571442 TMC6Q7Z403 805 aa7.27□□□□□ -1.25
SMG6-209ENST00000571442 C14orf80Q86SX3 495 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms