RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 VDRP11473 427 aa18.04■□□□□ 0.48
SCARF1-205ENST00000571272 TGM2P21980 687 aa18.04■□□□□ 0.48
SCARF1-205ENST00000571272 PEX6Q13608 980 aa18.04■□□□□ 0.48
SCARF1-205ENST00000571272 PRKG1Q13976 671 aa18.04■□□□□ 0.48
SCARF1-205ENST00000571272 PDK2Q15119 407 aa18.04■□□□□ 0.48
SCARF1-205ENST00000571272 LPCAT4Q643R3 524 aa18.04■□□□□ 0.48
SCARF1-205ENST00000571272 BUD23O43709 281 aaKnown RBP18.03■□□□□ 0.48
SCARF1-205ENST00000571272 TFE3P19532 575 aaPredicted RBP18.03■□□□□ 0.48
SCARF1-205ENST00000571272 AOC1P19801 751 aa18.03■□□□□ 0.48
SCARF1-205ENST00000571272 SLC1A6P48664 564 aa18.03■□□□□ 0.48
SCARF1-205ENST00000571272 CLCN3P51790 818 aa18.03■□□□□ 0.48
SCARF1-205ENST00000571272 ASPHQ12797 758 aa18.03■□□□□ 0.48
SCARF1-205ENST00000571272 SLC10A2Q12908 348 aaPredicted RBP18.03■□□□□ 0.48
SCARF1-205ENST00000571272 TUBB3Q13509 450 aa18.03■□□□□ 0.48
SCARF1-205ENST00000571272 TBCCQ15814 346 aa18.03■□□□□ 0.48
SCARF1-205ENST00000571272 HSDL1Q3SXM5 330 aa18.03■□□□□ 0.48
SCARF1-205ENST00000571272 BOLA3Q53S33 107 aa18.03■□□□□ 0.48
SCARF1-205ENST00000571272 EFHC1Q5JVL4 640 aa18.03■□□□□ 0.48
SCARF1-205ENST00000571272 TEDDM1Q5T9Z0 273 aa18.03■□□□□ 0.48
SCARF1-205ENST00000571272 TMCO4Q5TGY1 634 aa18.03■□□□□ 0.48
SCARF1-205ENST00000571272 VWA5B1Q5TIE3 1220 aa18.03■□□□□ 0.48
SCARF1-205ENST00000571272 RNF111Q6ZNA4 994 aa18.03■□□□□ 0.48
SCARF1-205ENST00000571272 ATG14Q6ZNE5 492 aa18.03■□□□□ 0.48
SCARF1-205ENST00000571272 ILDR2Q71H61 639 aa18.03■□□□□ 0.48
SCARF1-205ENST00000571272 RASSF3Q86WH2 238 aa18.03■□□□□ 0.48
SCARF1-205ENST00000571272 SCUBE3Q8IX30 993 aa18.03■□□□□ 0.48
SCARF1-205ENST00000571272 DNERQ8NFT8 737 aa18.03■□□□□ 0.48
SCARF1-205ENST00000571272 C1orf21Q9H246 121 aa18.03■□□□□ 0.48
SCARF1-205ENST00000571272 S100A14Q9HCY8 104 aa18.03■□□□□ 0.48
SCARF1-205ENST00000571272 PNPOQ9NVS9 261 aa18.03■□□□□ 0.48
SCARF1-205ENST00000571272 BTBD7Q9P203 1132 aa18.03■□□□□ 0.48
SCARF1-205ENST00000571272 EMCNQ9ULC0 261 aa18.03■□□□□ 0.48
SCARF1-205ENST00000571272 APOBEC2Q9Y235 224 aaKnown RBP18.03■□□□□ 0.48
SCARF1-205ENST00000571272 LOC100653049A0A140TA62 436 aa18.03■□□□□ 0.48
SCARF1-205ENST00000571272 WDR27A2RRH5 827 aa18.03■□□□□ 0.48
SCARF1-205ENST00000571272 ZBTB42B2RXF5 422 aa18.03■□□□□ 0.48
SCARF1-205ENST00000571272 KRT34O76011 436 aa18.03■□□□□ 0.48
SCARF1-205ENST00000571272 PROCP04070 461 aa18.03■□□□□ 0.48
SCARF1-205ENST00000571272 ATXN1P54253 815 aaKnown RBP18.03■□□□□ 0.48
SCARF1-205ENST00000571272 MBLAC2Q68D91 279 aa18.03■□□□□ 0.48
SCARF1-205ENST00000571272 SLC9A4Q6AI14 798 aa18.03■□□□□ 0.48
SCARF1-205ENST00000571272 KYAT3Q6YP21 454 aaKnown RBP18.03■□□□□ 0.48
SCARF1-205ENST00000571272 ARCQ7LC44 396 aa18.03■□□□□ 0.48
SCARF1-205ENST00000571272 LRRC39Q96DD0 335 aa18.03■□□□□ 0.48
SCARF1-205ENST00000571272 GPAMQ9HCL2 828 aa18.03■□□□□ 0.48
SCARF1-205ENST00000571272 IL1RAPL1Q9NZN1 696 aa18.03■□□□□ 0.48
SCARF1-205ENST00000571272 PCDHA11Q9Y5I1 949 aa18.03■□□□□ 0.48
SCARF1-205ENST00000571272 STAG3L1P0CL83 205 aa18.02■□□□□ 0.48
SCARF1-205ENST00000571272 CYP2F1P24903 491 aa18.02■□□□□ 0.48
SCARF1-205ENST00000571272 MAGEA3P43357 314 aa18.02■□□□□ 0.48
SCARF1-205ENST00000571272 BSPRYQ5W0U4 402 aa18.02■□□□□ 0.48
SCARF1-205ENST00000571272 NETO2Q8NC67 525 aa18.02■□□□□ 0.48
SCARF1-205ENST00000571272 MCUQ8NE86 351 aa18.02■□□□□ 0.48
SCARF1-205ENST00000571272 RAB3IL1Q8TBN0 382 aa18.02■□□□□ 0.48
SCARF1-205ENST00000571272 ZFAND2BQ8WV99 257 aa18.02■□□□□ 0.48
SCARF1-205ENST00000571272 HPDLQ96IR7 371 aa18.02■□□□□ 0.48
SCARF1-205ENST00000571272 TPP1O14773 563 aa18.02■□□□□ 0.48
SCARF1-205ENST00000571272 SIN3BO75182 1162 aa18.02■□□□□ 0.48
SCARF1-205ENST00000571272 FKBP6O75344 327 aa18.02■□□□□ 0.48
SCARF1-205ENST00000571272 ALDOAP04075 364 aaKnown RBP18.02■□□□□ 0.48
SCARF1-205ENST00000571272 FGF3P11487 239 aaPredicted RBP18.02■□□□□ 0.48
SCARF1-205ENST00000571272 GSTT1P30711 240 aa18.02■□□□□ 0.48
SCARF1-205ENST00000571272 SDC4P31431 198 aa18.02■□□□□ 0.48
SCARF1-205ENST00000571272 MAGEA6P43360 314 aa18.02■□□□□ 0.48
SCARF1-205ENST00000571272 PMF1Q6P1K2 205 aa18.02■□□□□ 0.48
SCARF1-205ENST00000571272 MTHFD1LQ6UB35 978 aa18.02■□□□□ 0.48
SCARF1-205ENST00000571272 APBB2Q92870 758 aa18.02■□□□□ 0.48
SCARF1-205ENST00000571272 PPP2R3CQ969Q6 453 aa18.02■□□□□ 0.48
SCARF1-205ENST00000571272 B3GNT5Q9BYG0 378 aa18.02■□□□□ 0.48
SCARF1-205ENST00000571272 C2orf40Q9H1Z8 148 aa18.02■□□□□ 0.48
SCARF1-205ENST00000571272 FZD8Q9H461 694 aa18.02■□□□□ 0.48
SCARF1-205ENST00000571272 NRDE2Q9H7Z3 1164 aa18.02■□□□□ 0.48
SCARF1-205ENST00000571272 HOXC10Q9NYD6 342 aa18.02■□□□□ 0.48
SCARF1-205ENST00000571272 LCTP09848 1927 aa18.01■□□□□ 0.47
SCARF1-205ENST00000571272 LGR5O75473 907 aa18.01■□□□□ 0.47
SCARF1-205ENST00000571272 ZMPSTE24O75844 475 aa18.01■□□□□ 0.47
SCARF1-205ENST00000571272 PFKMP08237 780 aa18.01■□□□□ 0.47
SCARF1-205ENST00000571272 SERPINB9P50453 376 aa18.01■□□□□ 0.47
SCARF1-205ENST00000571272 SFT2D3Q587I9 215 aa18.01■□□□□ 0.47
SCARF1-205ENST00000571272 MAVSQ7Z434 540 aa18.01■□□□□ 0.47
SCARF1-205ENST00000571272 DHDDSQ86SQ9 333 aa18.01■□□□□ 0.47
SCARF1-205ENST00000571272 OR6Y1Q8NGX8 325 aa18.01■□□□□ 0.47
SCARF1-205ENST00000571272 MIS12Q9H081 205 aa18.01■□□□□ 0.47
SCARF1-205ENST00000571272 DHX35Q9H5Z1 703 aaKnown RBP18.01■□□□□ 0.47
SCARF1-205ENST00000571272 A0A1B0GVG6 124 aa18.01■□□□□ 0.47
SCARF1-205ENST00000571272 NCF2P19878 526 aaPredicted RBP18.01■□□□□ 0.47
SCARF1-205ENST00000571272 COPAP53621 1224 aa18.01■□□□□ 0.47
SCARF1-205ENST00000571272 CDK18Q07002 472 aa18.01■□□□□ 0.47
SCARF1-205ENST00000571272 PDE1CQ14123 709 aaPredicted RBP18.01■□□□□ 0.47
SCARF1-205ENST00000571272 PPM1JQ5JR12 505 aa18.01■□□□□ 0.47
SCARF1-205ENST00000571272 RABGAP1LQ5R372 815 aa18.01■□□□□ 0.47
SCARF1-205ENST00000571272 KCNT2Q6UVM3 1135 aa18.01■□□□□ 0.47
SCARF1-205ENST00000571272 MOCS1Q9NZB8 636 aa18.01■□□□□ 0.47
SCARF1-205ENST00000571272 DNAJB4Q9UDY4 337 aa18.01■□□□□ 0.47
SCARF1-205ENST00000571272 ADAMTS6Q9UKP5 1117 aa18.01■□□□□ 0.47
SCARF1-205ENST00000571272 PSAT1Q9Y617 370 aa18.01■□□□□ 0.47
SCARF1-205ENST00000571272 IL18RAPO95256 599 aa18.01■□□□□ 0.47
SCARF1-205ENST00000571272 ARIH2O95376 493 aa18.01■□□□□ 0.47
SCARF1-205ENST00000571272 SESN2P58004 480 aaPredicted RBP18.01■□□□□ 0.47
SCARF1-205ENST00000571272 GOLGA7BQ2TAP0 167 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms