RNA–Protein interactions for RNA: ENST00000569715.5

PDXDC1-216, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PDXDC1, Length 3,775 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-216ENST00000569715 RBP3P10745 1247 aa11.34□□□□□ -0.59
PDXDC1-216ENST00000569715 ATF2P15336 505 aa11.34□□□□□ -0.59
PDXDC1-216ENST00000569715 SYN1P17600 705 aa11.34□□□□□ -0.59
PDXDC1-216ENST00000569715 DNAJB2P25686 324 aa11.34□□□□□ -0.59
PDXDC1-216ENST00000569715 ADCY8P40145 1251 aa11.34□□□□□ -0.59
PDXDC1-216ENST00000569715 CXCR3P49682 368 aa11.34□□□□□ -0.59
PDXDC1-216ENST00000569715 UBAP2Q5T6F2 1119 aaKnown RBP11.34□□□□□ -0.59
PDXDC1-216ENST00000569715 DENND5BQ6ZUT9 1274 aa11.34□□□□□ -0.59
PDXDC1-216ENST00000569715 TMC3Q7Z5M5 1100 aa11.34□□□□□ -0.59
PDXDC1-216ENST00000569715 VSIG1Q86XK7 387 aa11.34□□□□□ -0.59
PDXDC1-216ENST00000569715 ART4Q93070 314 aa11.34□□□□□ -0.59
PDXDC1-216ENST00000569715 SNF8Q96H20 258 aa11.34□□□□□ -0.59
PDXDC1-216ENST00000569715 ARHGEF4Q9NR80 690 aa11.34□□□□□ -0.59
PDXDC1-216ENST00000569715 ABCC13Q9NSE7 274 aa11.34□□□□□ -0.59
PDXDC1-216ENST00000569715 FEZ2Q9UHY8 353 aaPredicted RBP11.34□□□□□ -0.59
PDXDC1-216ENST00000569715 PLXNA4Q9HCM2 1894 aa11.34□□□□□ -0.59
PDXDC1-216ENST00000569715 MCF2LO15068 1137 aa11.34□□□□□ -0.59
PDXDC1-216ENST00000569715 LINC00271P0C7V0 271 aa11.34□□□□□ -0.59
PDXDC1-216ENST00000569715 LAG3P18627 525 aa11.34□□□□□ -0.59
PDXDC1-216ENST00000569715 FPGSQ05932 587 aa11.34□□□□□ -0.59
PDXDC1-216ENST00000569715 UAP1Q16222 522 aaPredicted RBP11.34□□□□□ -0.59
PDXDC1-216ENST00000569715 EFHC2Q5JST6 749 aa11.34□□□□□ -0.59
PDXDC1-216ENST00000569715 NCBP2-AS2Q69YL0 99 aa11.34□□□□□ -0.59
PDXDC1-216ENST00000569715 NTAN1Q96AB6 310 aa11.34□□□□□ -0.59
PDXDC1-216ENST00000569715 TKTL2Q9H0I9 626 aa11.34□□□□□ -0.59
PDXDC1-216ENST00000569715 IL37Q9NZH6 218 aa11.34□□□□□ -0.59
PDXDC1-216ENST00000569715 BACE2Q9Y5Z0 518 aa11.34□□□□□ -0.59
PDXDC1-216ENST00000569715 LAMA3Q16787 3333 aa11.34□□□□□ -0.59
PDXDC1-216ENST00000569715 ZNF487B1APH4 448 aa11.33□□□□□ -0.59
PDXDC1-216ENST00000569715 H3BQF6 201 aa11.33□□□□□ -0.59
PDXDC1-216ENST00000569715 IRAK2O43187 625 aa11.33□□□□□ -0.59
PDXDC1-216ENST00000569715 SEC24AO95486 1093 aa11.33□□□□□ -0.59
PDXDC1-216ENST00000569715 HSPA9P38646 679 aaKnown RBP11.33□□□□□ -0.59
PDXDC1-216ENST00000569715 GLUD2P49448 558 aa11.33□□□□□ -0.59
PDXDC1-216ENST00000569715 ITGA8P53708 1063 aa11.33□□□□□ -0.59
PDXDC1-216ENST00000569715 FAM193AP78312 1265 aa11.33□□□□□ -0.59
PDXDC1-216ENST00000569715 DSG1Q02413 1049 aa11.33□□□□□ -0.59
PDXDC1-216ENST00000569715 EIF4EBP2Q13542 120 aaPredicted RBP11.33□□□□□ -0.59
PDXDC1-216ENST00000569715 P3H1Q32P28 736 aa11.33□□□□□ -0.59
PDXDC1-216ENST00000569715 TAB3Q8N5C8 712 aaPredicted RBP11.33□□□□□ -0.59
PDXDC1-216ENST00000569715 FAM71DQ8N9W8 422 aa11.33□□□□□ -0.59
PDXDC1-216ENST00000569715 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.33□□□□□ -0.59
PDXDC1-216ENST00000569715 PWWP2AQ96N64 755 aa11.33□□□□□ -0.59
PDXDC1-216ENST00000569715 SLC9A7Q96T83 725 aa11.33□□□□□ -0.59
PDXDC1-216ENST00000569715 SMOC2Q9H3U7 446 aa11.33□□□□□ -0.59
PDXDC1-216ENST00000569715 RRN3Q9NYV6 651 aa11.33□□□□□ -0.59
PDXDC1-216ENST00000569715 SPG21Q9NZD8 308 aa11.33□□□□□ -0.59
PDXDC1-216ENST00000569715 CHD9Q3L8U1 2897 aa11.33□□□□□ -0.6
PDXDC1-216ENST00000569715 GJB5O95377 273 aa11.33□□□□□ -0.6
PDXDC1-216ENST00000569715 FGBP02675 491 aa11.33□□□□□ -0.6
PDXDC1-216ENST00000569715 TGM2P21980 687 aa11.33□□□□□ -0.6
PDXDC1-216ENST00000569715 ARL4AP40617 200 aa11.33□□□□□ -0.6
PDXDC1-216ENST00000569715 DHX9Q08211 1270 aaKnown RBP11.33□□□□□ -0.6
PDXDC1-216ENST00000569715 SCAPQ12770 1279 aa11.33□□□□□ -0.6
PDXDC1-216ENST00000569715 SEMA3BQ13214 749 aa11.33□□□□□ -0.6
PDXDC1-216ENST00000569715 PSTKQ8IV42 348 aaKnown RBP11.33□□□□□ -0.6
PDXDC1-216ENST00000569715 MREGQ8N565 214 aa11.33□□□□□ -0.6
PDXDC1-216ENST00000569715 FBXO32Q969P5 355 aa11.33□□□□□ -0.6
PDXDC1-216ENST00000569715 HERC2P3Q9BVR0 1158 aa11.33□□□□□ -0.6
PDXDC1-216ENST00000569715 WDCPQ9H6R7 721 aa11.33□□□□□ -0.6
PDXDC1-216ENST00000569715 WHRNQ9P202 907 aa11.33□□□□□ -0.6
PDXDC1-216ENST00000569715 PRKAG2Q9UGJ0 569 aa11.33□□□□□ -0.6
PDXDC1-216ENST00000569715 AGPSO00116 658 aa11.33□□□□□ -0.6
PDXDC1-216ENST00000569715 MFSD11O43934 449 aa11.33□□□□□ -0.6
PDXDC1-216ENST00000569715 LMNB2Q03252 620 aa11.33□□□□□ -0.6
PDXDC1-216ENST00000569715 TAF10Q12962 218 aa11.33□□□□□ -0.6
PDXDC1-216ENST00000569715 CALCOCO2Q13137 446 aa11.33□□□□□ -0.6
PDXDC1-216ENST00000569715 PPIGQ13427 754 aaKnown RBP eCLIP11.33□□□□□ -0.63e-7■■□□□ 14
PDXDC1-216ENST00000569715 TMEM240Q5SV17 173 aa11.33□□□□□ -0.6
PDXDC1-216ENST00000569715 IZUMO3Q5VZ72 239 aa11.33□□□□□ -0.6
PDXDC1-216ENST00000569715 RHBDF2Q6PJF5 856 aa11.33□□□□□ -0.6
PDXDC1-216ENST00000569715 BEND5Q7L4P6 421 aa11.33□□□□□ -0.6
PDXDC1-216ENST00000569715 MON1AQ86VX9 555 aa11.33□□□□□ -0.6
PDXDC1-216ENST00000569715 TXLNGYQ9BZA5 131 aa11.33□□□□□ -0.6
PDXDC1-216ENST00000569715 ADAM7Q9H2U9 754 aa11.33□□□□□ -0.6
PDXDC1-216ENST00000569715 FBXO44Q9H4M3 255 aa11.33□□□□□ -0.6
PDXDC1-216ENST00000569715 VIPAS39Q9H9C1 493 aa11.33□□□□□ -0.6
PDXDC1-216ENST00000569715 FAM92AA1XBS5 289 aa11.32□□□□□ -0.6
PDXDC1-216ENST00000569715 TBX18O95935 607 aa11.32□□□□□ -0.6
PDXDC1-216ENST00000569715 YWHAQP27348 245 aa11.32□□□□□ -0.6
PDXDC1-216ENST00000569715 CHKAP35790 457 aa11.32□□□□□ -0.6
PDXDC1-216ENST00000569715 HSD17B3P37058 310 aa11.32□□□□□ -0.6
PDXDC1-216ENST00000569715 GPS1Q13098 491 aa11.32□□□□□ -0.6
PDXDC1-216ENST00000569715 RASIP1Q5U651 963 aa11.32□□□□□ -0.6
PDXDC1-216ENST00000569715 DARS2Q6PI48 645 aaKnown RBP11.32□□□□□ -0.6
PDXDC1-216ENST00000569715 TP53INP2Q8IXH6 220 aa11.32□□□□□ -0.6
PDXDC1-216ENST00000569715 VPS52Q8N1B4 723 aa11.32□□□□□ -0.6
PDXDC1-216ENST00000569715 CCDC89Q8N998 374 aa11.32□□□□□ -0.6
PDXDC1-216ENST00000569715 FRMD8P1Q9BZ68 369 aaPredicted RBP11.32□□□□□ -0.6
PDXDC1-216ENST00000569715 AAASQ9NRG9 546 aa11.32□□□□□ -0.6
PDXDC1-216ENST00000569715 DNAJC17Q9NVM6 304 aaKnown RBP11.32□□□□□ -0.6
PDXDC1-216ENST00000569715 XPO7Q9UIA9 1087 aaKnown RBP11.32□□□□□ -0.6
PDXDC1-216ENST00000569715 MAGED2Q9UNF1 606 aaPredicted RBP11.32□□□□□ -0.6
PDXDC1-216ENST00000569715 NR2E3Q9Y5X4 410 aa11.32□□□□□ -0.6
PDXDC1-216ENST00000569715 H7C0C1 242 aa11.32□□□□□ -0.6
PDXDC1-216ENST00000569715 EEF2KO00418 725 aaKnown RBP11.32□□□□□ -0.6
PDXDC1-216ENST00000569715 F9P00740 461 aa11.32□□□□□ -0.6
PDXDC1-216ENST00000569715 ATP5OP48047 213 aa11.32□□□□□ -0.6
PDXDC1-216ENST00000569715 DPYSQ14117 519 aa11.32□□□□□ -0.6
PDXDC1-216ENST00000569715 RFX8Q6ZV50 586 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms