RNA–Protein interactions for RNA: ENST00000569687.1

SF3B3-213, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 333 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-213ENST00000569687 RALGAPA2Q2PPJ7 1873 aa5.58□□□□□ -1.52
SF3B3-213ENST00000569687 CLUHO75153 1309 aa5.58□□□□□ -1.52
SF3B3-213ENST00000569687 SF3B1O75533 1304 aaKnown RBP eCLIP5.58□□□□□ -1.52
SF3B3-213ENST00000569687 TMEM120BA0PK00 339 aa5.58□□□□□ -1.52
SF3B3-213ENST00000569687 ARHGEF37A1IGU5 675 aa5.58□□□□□ -1.52
SF3B3-213ENST00000569687 ARL5CA6NH57 179 aa5.58□□□□□ -1.52
SF3B3-213ENST00000569687 H7C0C1 242 aa5.58□□□□□ -1.52
SF3B3-213ENST00000569687 M0QZQ0 153 aa5.58□□□□□ -1.52
SF3B3-213ENST00000569687 PIK3R2O00459 728 aa5.58□□□□□ -1.52
SF3B3-213ENST00000569687 HCRTO43612 131 aa5.58□□□□□ -1.52
SF3B3-213ENST00000569687 ATP2C2O75185 946 aa5.58□□□□□ -1.52
SF3B3-213ENST00000569687 DAB1O75553 588 aa5.58□□□□□ -1.52
SF3B3-213ENST00000569687 DGKIO75912 1065 aa5.58□□□□□ -1.52
SF3B3-213ENST00000569687 RECKO95980 971 aa5.58□□□□□ -1.52
SF3B3-213ENST00000569687 F9P00740 461 aa5.58□□□□□ -1.52
SF3B3-213ENST00000569687 FYNP06241 537 aa5.58□□□□□ -1.52
SF3B3-213ENST00000569687 LCP1P13796 627 aa5.58□□□□□ -1.52
SF3B3-213ENST00000569687 BRAFP15056 766 aa5.58□□□□□ -1.52
SF3B3-213ENST00000569687 TPSB2P20231 275 aa5.58□□□□□ -1.52
SF3B3-213ENST00000569687 CYP2F1P24903 491 aa5.58□□□□□ -1.52
SF3B3-213ENST00000569687 PCSK1P29120 753 aa5.58□□□□□ -1.52
SF3B3-213ENST00000569687 ADORA2BP29275 332 aa5.58□□□□□ -1.52
SF3B3-213ENST00000569687 TKTP29401 623 aaKnown RBP5.58□□□□□ -1.52
SF3B3-213ENST00000569687 ADRA1BP35368 520 aa5.58□□□□□ -1.52
SF3B3-213ENST00000569687 MAGEA9P43362 315 aa5.58□□□□□ -1.52
SF3B3-213ENST00000569687 ATP5OP48047 213 aa5.58□□□□□ -1.52
SF3B3-213ENST00000569687 GEMIN4P57678 1058 aaKnown RBP5.58□□□□□ -1.52
SF3B3-213ENST00000569687 DYNLT1P63172 113 aa5.58□□□□□ -1.52
SF3B3-213ENST00000569687 CDK16Q00536 496 aa5.58□□□□□ -1.52
SF3B3-213ENST00000569687 RNASELQ05823 741 aaKnown RBP5.58□□□□□ -1.52
SF3B3-213ENST00000569687 SCAPQ12770 1279 aa5.58□□□□□ -1.52
SF3B3-213ENST00000569687 SLC10A2Q12908 348 aaPredicted RBP5.58□□□□□ -1.52
SF3B3-213ENST00000569687 ITIH4Q14624 930 aa5.58□□□□□ -1.52
SF3B3-213ENST00000569687 PAFAH1B3Q15102 231 aaKnown RBP5.58□□□□□ -1.52
SF3B3-213ENST00000569687 TPSAB1Q15661 275 aa5.58□□□□□ -1.52
SF3B3-213ENST00000569687 KCNA10Q16322 511 aa5.58□□□□□ -1.52
SF3B3-213ENST00000569687 TRIM71Q2Q1W2 868 aaKnown RBP5.58□□□□□ -1.52
SF3B3-213ENST00000569687 KLHL38Q2WGJ6 581 aa5.58□□□□□ -1.52
SF3B3-213ENST00000569687 MSS51Q4VC12 460 aa5.58□□□□□ -1.52
SF3B3-213ENST00000569687 CCDC38Q502W7 563 aa5.58□□□□□ -1.52
SF3B3-213ENST00000569687 LACTB2Q53H82 288 aaPredicted RBP5.58□□□□□ -1.52
SF3B3-213ENST00000569687 SLC45A4Q5BKX6 768 aa5.58□□□□□ -1.52
SF3B3-213ENST00000569687 MAP3K21Q5TCX8 1036 aa5.58□□□□□ -1.52
SF3B3-213ENST00000569687 GKAP1Q5VSY0 366 aaPredicted RBP5.58□□□□□ -1.52
SF3B3-213ENST00000569687 KIAA0319Q5VV43 1072 aa5.58□□□□□ -1.52
SF3B3-213ENST00000569687 ANKRD22Q5VYY1 191 aa5.58□□□□□ -1.52
SF3B3-213ENST00000569687 PM20D1Q6GTS8 502 aa5.58□□□□□ -1.52
SF3B3-213ENST00000569687 SCYL2Q6P3W7 929 aa5.58□□□□□ -1.52
SF3B3-213ENST00000569687 C1orf228Q6PIY5 440 aa5.58□□□□□ -1.52
SF3B3-213ENST00000569687 DCLRE1AQ6PJP8 1040 aa5.58□□□□□ -1.52
SF3B3-213ENST00000569687 RGS9BPQ6ZS82 235 aa5.58□□□□□ -1.52
SF3B3-213ENST00000569687 CAPN12Q6ZSI9 719 aa5.58□□□□□ -1.52
SF3B3-213ENST00000569687 CLEC20AQ6ZU45 233 aa5.58□□□□□ -1.52
SF3B3-213ENST00000569687 C3orf62Q6ZUJ4 267 aa5.58□□□□□ -1.52
SF3B3-213ENST00000569687 CPLX4Q7Z7G2 160 aa5.58□□□□□ -1.52
SF3B3-213ENST00000569687 ZNF598Q86UK7 904 aaKnown RBP5.58□□□□□ -1.52
SF3B3-213ENST00000569687 TRABD2AQ86V40 505 aa5.58□□□□□ -1.52
SF3B3-213ENST00000569687 CDKL3Q8IVW4 592 aaPredicted RBP5.58□□□□□ -1.52
SF3B3-213ENST00000569687 PALM2Q8IXS6 379 aa5.58□□□□□ -1.52
SF3B3-213ENST00000569687 ZBED8Q8IZ13 594 aa5.58□□□□□ -1.52
SF3B3-213ENST00000569687 ATP11CQ8NB49 1132 aa5.58□□□□□ -1.52
SF3B3-213ENST00000569687 CD99L2Q8TCZ2 262 aa5.58□□□□□ -1.52
SF3B3-213ENST00000569687 TRAF3IP1Q8TDR0 691 aaPredicted RBP5.58□□□□□ -1.52
SF3B3-213ENST00000569687 PPP1R13LQ8WUF5 828 aa5.58□□□□□ -1.52
SF3B3-213ENST00000569687 WNT8BQ93098 351 aa5.58□□□□□ -1.52
SF3B3-213ENST00000569687 NTAN1Q96AB6 310 aa5.58□□□□□ -1.52
SF3B3-213ENST00000569687 PGBD4Q96DM1 585 aa5.58□□□□□ -1.52
SF3B3-213ENST00000569687 SGSM3Q96HU1 749 aa5.58□□□□□ -1.52
SF3B3-213ENST00000569687 SEC16BQ96JE7 1060 aa5.58□□□□□ -1.52
SF3B3-213ENST00000569687 MAGEB18Q96M61 343 aa5.58□□□□□ -1.52
SF3B3-213ENST00000569687 ZFP42Q96MM3 310 aa5.58□□□□□ -1.52
SF3B3-213ENST00000569687 UROC1Q96N76 676 aa5.58□□□□□ -1.52
SF3B3-213ENST00000569687 OLFM3Q96PB7 478 aa5.58□□□□□ -1.52
SF3B3-213ENST00000569687 CSPG4P5Q96PW8 444 aa5.58□□□□□ -1.52
SF3B3-213ENST00000569687 ACBD6Q9BR61 282 aa5.58□□□□□ -1.52
SF3B3-213ENST00000569687 TSEN34Q9BSV6 310 aaKnown RBP5.58□□□□□ -1.52
SF3B3-213ENST00000569687 BRD8Q9H0E9 1235 aa5.58□□□□□ -1.52
SF3B3-213ENST00000569687 ACSS3Q9H6R3 686 aa5.58□□□□□ -1.52
SF3B3-213ENST00000569687 AGO3Q9H9G7 860 aaKnown RBP5.58□□□□□ -1.52
SF3B3-213ENST00000569687 NGRNQ9NPE2 291 aaKnown RBP5.58□□□□□ -1.52
SF3B3-213ENST00000569687 CRTAC1Q9NQ79 661 aa5.58□□□□□ -1.52
SF3B3-213ENST00000569687 RNF19AQ9NV58 838 aa5.58□□□□□ -1.52
SF3B3-213ENST00000569687 DDX43Q9NXZ2 648 aaKnown RBP5.58□□□□□ -1.52
SF3B3-213ENST00000569687 SRRDQ9UH36 339 aa5.58□□□□□ -1.52
SF3B3-213ENST00000569687 DCTN4Q9UJW0 460 aa5.58□□□□□ -1.52
SF3B3-213ENST00000569687 DSEQ9UL01 958 aa5.58□□□□□ -1.52
SF3B3-213ENST00000569687 FZD10Q9ULW2 581 aa5.58□□□□□ -1.52
SF3B3-213ENST00000569687 PADI3Q9ULW8 664 aa5.58□□□□□ -1.52
SF3B3-213ENST00000569687 SMG5Q9UPR3 1016 aaKnown RBP5.58□□□□□ -1.52
SF3B3-213ENST00000569687 USP3Q9Y6I4 520 aa5.58□□□□□ -1.52
SF3B3-213ENST00000569687 TEX264Q9Y6I9 313 aa5.58□□□□□ -1.52
SF3B3-213ENST00000569687 DNMT3AQ9Y6K1 912 aaPredicted RBP5.58□□□□□ -1.52
SF3B3-213ENST00000569687 CITO14578 2027 aa5.58□□□□□ -1.52
SF3B3-213ENST00000569687 HTTP42858 3142 aa5.58□□□□□ -1.52
SF3B3-213ENST00000569687 SCN1AP35498 2009 aa5.57□□□□□ -1.52
SF3B3-213ENST00000569687 DOCK3Q8IZD9 2030 aa5.57□□□□□ -1.52
SF3B3-213ENST00000569687 CASP8AP2Q9UKL3 1982 aa5.57□□□□□ -1.52
SF3B3-213ENST00000569687 EXOC1LA0A1B0GW35 172 aa5.57□□□□□ -1.52
SF3B3-213ENST00000569687 TCRBV7S3A2A0A539 114 aa5.57□□□□□ -1.52
SF3B3-213ENST00000569687 MYBPHLA2RUH7 354 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms