RNA–Protein interactions for RNA: ENST00000569454.1

CDH13-213, Transcript of cadherin 13, humanhuman

TSL 3

Gene CDH13, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-213ENST00000569454 PTPN1P18031 435 aaKnown RBP5.93□□□□□ -1.46
CDH13-213ENST00000569454 CA4P22748 312 aa5.93□□□□□ -1.46
CDH13-213ENST00000569454 AKAP5P24588 427 aa5.93□□□□□ -1.46
CDH13-213ENST00000569454 DNAJB2P25686 324 aa5.93□□□□□ -1.46
CDH13-213ENST00000569454 CST5P28325 142 aaPredicted RBP5.93□□□□□ -1.46
CDH13-213ENST00000569454 ADORA2BP29275 332 aa5.93□□□□□ -1.46
CDH13-213ENST00000569454 ALDH3A1P30838 453 aa5.93□□□□□ -1.46
CDH13-213ENST00000569454 L1CAMP32004 1257 aa5.93□□□□□ -1.46
CDH13-213ENST00000569454 CYP2C18P33260 490 aa5.93□□□□□ -1.46
CDH13-213ENST00000569454 SERPINB6P35237 376 aa5.93□□□□□ -1.46
CDH13-213ENST00000569454 HCAR3P49019 387 aa5.93□□□□□ -1.46
CDH13-213ENST00000569454 SULT1E1P49888 294 aa5.93□□□□□ -1.46
CDH13-213ENST00000569454 LIG3P49916 1009 aa5.93□□□□□ -1.46
CDH13-213ENST00000569454 SERPINB9P50453 376 aa5.93□□□□□ -1.46
CDH13-213ENST00000569454 MRPS5P82675 430 aaKnown RBP5.93□□□□□ -1.46
CDH13-213ENST00000569454 ZNF200P98182 395 aaPredicted RBP5.93□□□□□ -1.46
CDH13-213ENST00000569454 ZNF33AQ06730 810 aa5.93□□□□□ -1.46
CDH13-213ENST00000569454 SCAPQ12770 1279 aa5.93□□□□□ -1.46
CDH13-213ENST00000569454 DNAJC3Q13217 504 aa5.93□□□□□ -1.46
CDH13-213ENST00000569454 SEMA5AQ13591 1074 aa5.93□□□□□ -1.46
CDH13-213ENST00000569454 PDK1Q15118 436 aa5.93□□□□□ -1.46
CDH13-213ENST00000569454 MTFR1Q15390 333 aa5.93□□□□□ -1.46
CDH13-213ENST00000569454 ARL13BQ3SXY8 428 aa5.93□□□□□ -1.46
CDH13-213ENST00000569454 BBS9Q3SYG4 887 aa5.93□□□□□ -1.46
CDH13-213ENST00000569454 PPP6R3Q5H9R7 873 aaPredicted RBP5.93□□□□□ -1.46
CDH13-213ENST00000569454 INTS6LQ5JSJ4 861 aaKnown RBP5.93□□□□□ -1.46
CDH13-213ENST00000569454 HHATQ5VTY9 493 aa5.93□□□□□ -1.46
CDH13-213ENST00000569454 FYB2Q5VWT5 728 aa5.93□□□□□ -1.46
CDH13-213ENST00000569454 NUGGCQ68CJ6 796 aa5.93□□□□□ -1.46
CDH13-213ENST00000569454 RNF43Q68DV7 783 aa5.93□□□□□ -1.46
CDH13-213ENST00000569454 TRNP1Q6NT89 227 aa5.93□□□□□ -1.46
CDH13-213ENST00000569454 THSD4Q6ZMP0 1018 aa5.93□□□□□ -1.46
CDH13-213ENST00000569454 C3orf62Q6ZUJ4 267 aa5.93□□□□□ -1.46
CDH13-213ENST00000569454 CYS1Q717R9 158 aa5.93□□□□□ -1.46
CDH13-213ENST00000569454 BEND5Q7L4P6 421 aa5.93□□□□□ -1.46
CDH13-213ENST00000569454 TRPM8Q7Z2W7 1104 aa5.93□□□□□ -1.46
CDH13-213ENST00000569454 MRPL10Q7Z7H8 261 aaKnown RBP5.93□□□□□ -1.46
CDH13-213ENST00000569454 PIGZQ86VD9 579 aa5.93□□□□□ -1.46
CDH13-213ENST00000569454 SERINC5Q86VE9 423 aa5.93□□□□□ -1.46
CDH13-213ENST00000569454 ZC3H18Q86VM9 953 aaKnown RBP5.93□□□□□ -1.46
CDH13-213ENST00000569454 FAM228AQ86W67 206 aa5.93□□□□□ -1.46
CDH13-213ENST00000569454 SLC26A11Q86WA9 606 aa5.93□□□□□ -1.46
CDH13-213ENST00000569454 LRRC6Q86X45 466 aa5.93□□□□□ -1.46
CDH13-213ENST00000569454 CHSY1Q86X52 802 aa5.93□□□□□ -1.46
CDH13-213ENST00000569454 METTL23Q86XA0 190 aa5.93□□□□□ -1.46
CDH13-213ENST00000569454 TRIM42Q8IWZ5 723 aa5.93□□□□□ -1.46
CDH13-213ENST00000569454 SCUBE3Q8IX30 993 aa5.93□□□□□ -1.46
CDH13-213ENST00000569454 FUKQ8N0W3 1084 aa5.93□□□□□ -1.46
CDH13-213ENST00000569454 PQLC3Q8N755 202 aa5.93□□□□□ -1.46
CDH13-213ENST00000569454 ANKRD42Q8N9B4 389 aa5.93□□□□□ -1.46
CDH13-213ENST00000569454 SMG8Q8ND04 991 aaKnown RBP5.93□□□□□ -1.46
CDH13-213ENST00000569454 LRRC8CQ8TDW0 803 aa5.93□□□□□ -1.46
CDH13-213ENST00000569454 FBF1Q8TES7 1133 aa5.93□□□□□ -1.46
CDH13-213ENST00000569454 PTCD2Q8WV60 388 aaKnown RBP5.93□□□□□ -1.46
CDH13-213ENST00000569454 TFB1MQ8WVM0 346 aaKnown RBP5.93□□□□□ -1.46
CDH13-213ENST00000569454 TMEM40Q8WWA1 233 aa5.93□□□□□ -1.46
CDH13-213ENST00000569454 SLC44A1Q8WWI5 657 aa5.93□□□□□ -1.46
CDH13-213ENST00000569454 CCT6BQ92526 530 aa5.93□□□□□ -1.46
CDH13-213ENST00000569454 WNT8BQ93098 351 aa5.93□□□□□ -1.46
CDH13-213ENST00000569454 NT5C3BQ969T7 300 aa5.93□□□□□ -1.46
CDH13-213ENST00000569454 FAM149B1Q96BN6 582 aa5.93□□□□□ -1.46
CDH13-213ENST00000569454 PGBD4Q96DM1 585 aa5.93□□□□□ -1.46
CDH13-213ENST00000569454 PGAP3Q96FM1 320 aaPredicted RBP5.93□□□□□ -1.46
CDH13-213ENST00000569454 SMARCD1Q96GM5 515 aa5.93□□□□□ -1.46
CDH13-213ENST00000569454 PIWIL1Q96J94 861 aaKnown RBP5.93□□□□□ -1.46
CDH13-213ENST00000569454 HHIPL1Q96JK4 782 aa5.93□□□□□ -1.46
CDH13-213ENST00000569454 SPATA13Q96N96 652 aa5.93□□□□□ -1.46
CDH13-213ENST00000569454 OLFM3Q96PB7 478 aa5.93□□□□□ -1.46
CDH13-213ENST00000569454 PPP1R2P1Q96PQ5 205 aa5.93□□□□□ -1.46
CDH13-213ENST00000569454 CSPG4P5Q96PW8 444 aa5.93□□□□□ -1.46
CDH13-213ENST00000569454 SLC2A13Q96QE2 648 aa5.93□□□□□ -1.46
CDH13-213ENST00000569454 NPY6RQ99463 290 aa5.93□□□□□ -1.46
CDH13-213ENST00000569454 SENP6Q9GZR1 1112 aaPredicted RBP5.93□□□□□ -1.46
CDH13-213ENST00000569454 RABEP2Q9H5N1 569 aa5.93□□□□□ -1.46
CDH13-213ENST00000569454 CDHR5Q9HBB8 845 aa5.93□□□□□ -1.46
CDH13-213ENST00000569454 USP29Q9HBJ7 922 aa5.93□□□□□ -1.46
CDH13-213ENST00000569454 FAM105AQ9NUU6 356 aa5.93□□□□□ -1.46
CDH13-213ENST00000569454 ETNK2Q9NVF9 386 aa5.93□□□□□ -1.46
CDH13-213ENST00000569454 CTNNAL1Q9UBT7 734 aa5.93□□□□□ -1.46
CDH13-213ENST00000569454 TBK1Q9UHD2 729 aa5.93□□□□□ -1.46
CDH13-213ENST00000569454 RABGEF1Q9UJ41 708 aa5.93□□□□□ -1.46
CDH13-213ENST00000569454 GJD2Q9UKL4 321 aa5.93□□□□□ -1.46
CDH13-213ENST00000569454 SLC12A4Q9UP95 1085 aa5.93□□□□□ -1.46
CDH13-213ENST00000569454 VPS9D1Q9Y2B5 631 aa5.93□□□□□ -1.46
CDH13-213ENST00000569454 HEY1Q9Y5J3 304 aa5.93□□□□□ -1.46
CDH13-213ENST00000569454 CDY2AQ9Y6F7 541 aa5.93□□□□□ -1.46
CDH13-213ENST00000569454 TEX264Q9Y6I9 313 aa5.93□□□□□ -1.46
CDH13-213ENST00000569454 CAPN7Q9Y6W3 813 aa5.93□□□□□ -1.46
CDH13-213ENST00000569454 FASNP49327 2511 aaKnown RBP5.93□□□□□ -1.46
CDH13-213ENST00000569454 TCRBV9S1A1TA0A576 114 aa5.92□□□□□ -1.46
CDH13-213ENST00000569454 KBTBD13C9JR72 458 aa5.92□□□□□ -1.46
CDH13-213ENST00000569454 GOLGA8MH3BSY2 632 aa5.92□□□□□ -1.46
CDH13-213ENST00000569454 CAPN9O14815 690 aa5.92□□□□□ -1.46
CDH13-213ENST00000569454 TRIM66O15016 1216 aa5.92□□□□□ -1.46
CDH13-213ENST00000569454 SPTLC1O15269 473 aa5.92□□□□□ -1.46
CDH13-213ENST00000569454 SEPT4O43236 478 aa5.92□□□□□ -1.46
CDH13-213ENST00000569454 CA12O43570 354 aa5.92□□□□□ -1.46
CDH13-213ENST00000569454 TYROBPO43914 113 aa5.92□□□□□ -1.46
CDH13-213ENST00000569454 GRAP2O75791 330 aa5.92□□□□□ -1.46
CDH13-213ENST00000569454 DCTN3O75935 186 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms