RNA–Protein interactions for RNA: ENST00000568169.5

TCF4-238, Transcript of transcription factor 4, human

TSL 5

Gene TCF4, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF4-238	ENST00000568169	RHBDD1	Q8TEB9	315 aa		11.97	□□□□□ -0.49
TCF4-238	ENST00000568169	PRCC	Q92733	491 aa	Predicted RBP	11.97	□□□□□ -0.49
TCF4-238	ENST00000568169	PIWIL1	Q96J94	861 aa	Known RBP	11.97	□□□□□ -0.49
TCF4-238	ENST00000568169	PNPLA8	Q9NP80	782 aa		11.97	□□□□□ -0.49
TCF4-238	ENST00000568169	TFIP11	Q9UBB9	837 aa	Known RBP	11.97	□□□□□ -0.49
TCF4-238	ENST00000568169	MTMR6	Q9Y217	621 aa		11.97	□□□□□ -0.49
TCF4-238	ENST00000568169	ZNF510	Q9Y2H8	683 aa		11.97	□□□□□ -0.49
TCF4-238	ENST00000568169	GCN1	Q92616	2671 aa	Known RBP	11.97	□□□□□ -0.49
TCF4-238	ENST00000568169	PLXNA2	O75051	1894 aa		11.97	□□□□□ -0.49
TCF4-238	ENST00000568169	MUC22	E2RYF6	1773 aa	Predicted RBP	11.97	□□□□□ -0.49
TCF4-238	ENST00000568169	FREM2	Q5SZK8	3169 aa		11.96	□□□□□ -0.49
TCF4-238	ENST00000568169	COL5A1	P20908	1838 aa	Predicted RBP	11.96	□□□□□ -0.49
TCF4-238	ENST00000568169		A0A1B0GVT2	93 aa		11.96	□□□□□ -0.49
TCF4-238	ENST00000568169	TRABD2B	A6NFA1	517 aa		11.96	□□□□□ -0.49
TCF4-238	ENST00000568169	SYNCRIP	O60506	623 aa	Known RBP	11.96	□□□□□ -0.49
TCF4-238	ENST00000568169	CLSTN1	O94985	981 aa		11.96	□□□□□ -0.49
TCF4-238	ENST00000568169	ASS1	P00966	412 aa	Known RBP	11.96	□□□□□ -0.49
TCF4-238	ENST00000568169	C7	P10643	843 aa		11.96	□□□□□ -0.49
TCF4-238	ENST00000568169	PRKCH	P24723	683 aa		11.96	□□□□□ -0.49
TCF4-238	ENST00000568169	CHKA	P35790	457 aa		11.96	□□□□□ -0.49
TCF4-238	ENST00000568169	ASPA	P45381	313 aa		11.96	□□□□□ -0.49
TCF4-238	ENST00000568169	KIF11	P52732	1056 aa		11.96	□□□□□ -0.49
TCF4-238	ENST00000568169	CAMK2B	Q13554	666 aa		11.96	□□□□□ -0.49
TCF4-238	ENST00000568169	ZNF234	Q14588	700 aa		11.96	□□□□□ -0.49
TCF4-238	ENST00000568169	EIF4H	Q15056	248 aa	Known RBP	11.96	□□□□□ -0.49
TCF4-238	ENST00000568169	STK38	Q15208	465 aa		11.96	□□□□□ -0.49
TCF4-238	ENST00000568169	E2F5	Q15329	346 aa		11.96	□□□□□ -0.49
TCF4-238	ENST00000568169	ZACN	Q401N2	412 aa		11.96	□□□□□ -0.49
TCF4-238	ENST00000568169	CCDC186	Q7Z3E2	898 aa		11.96	□□□□□ -0.49
TCF4-238	ENST00000568169	GALNT15	Q8N3T1	639 aa		11.96	□□□□□ -0.49
TCF4-238	ENST00000568169	TAF4B	Q92750	862 aa		11.96	□□□□□ -0.49
TCF4-238	ENST00000568169	JAKMIP2	Q96AA8	810 aa		11.96	□□□□□ -0.49
TCF4-238	ENST00000568169	CYFIP2	Q96F07	1278 aa		11.96	□□□□□ -0.49
TCF4-238	ENST00000568169	LRIG1	Q96JA1	1093 aa		11.96	□□□□□ -0.49
TCF4-238	ENST00000568169	TWNK	Q96RR1	684 aa		11.96	□□□□□ -0.49
TCF4-238	ENST00000568169	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	11.96	□□□□□ -0.49
TCF4-238	ENST00000568169	SLC39A2	Q9NP94	309 aa		11.96	□□□□□ -0.49
TCF4-238	ENST00000568169	DMAC2	Q9NW81	257 aa		11.96	□□□□□ -0.49
TCF4-238	ENST00000568169	ELOVL2	Q9NXB9	296 aa		11.96	□□□□□ -0.49
TCF4-238	ENST00000568169	CLIC5	Q9NZA1	410 aa		11.96	□□□□□ -0.49
TCF4-238	ENST00000568169	BTBD3	Q9Y2F9	522 aa		11.96	□□□□□ -0.49
TCF4-238	ENST00000568169	SLCO1B1	Q9Y6L6	691 aa		11.96	□□□□□ -0.49
TCF4-238	ENST00000568169	WDFY3	Q8IZQ1	3526 aa		11.95	□□□□□ -0.5
TCF4-238	ENST00000568169	DOCK9	Q9BZ29	2069 aa		11.95	□□□□□ -0.5
TCF4-238	ENST00000568169		A0A087WV48	116 aa		11.95	□□□□□ -0.5
TCF4-238	ENST00000568169	PVALEF	A0A1B0GWK0	134 aa		11.95	□□□□□ -0.5
TCF4-238	ENST00000568169	SPTLC2	O15270	562 aa		11.95	□□□□□ -0.5
TCF4-238	ENST00000568169	STX6	O43752	255 aa		11.95	□□□□□ -0.5
TCF4-238	ENST00000568169	PPP6R2	O75170	966 aa		11.95	□□□□□ -0.5
TCF4-238	ENST00000568169	RALA	P11233	206 aa		11.95	□□□□□ -0.5
TCF4-238	ENST00000568169	CASP1	P29466	404 aa		11.95	□□□□□ -0.5
TCF4-238	ENST00000568169	CSNK1E	P49674	416 aa	Known RBP	11.95	□□□□□ -0.5
TCF4-238	ENST00000568169	DLG4	P78352	724 aa		11.95	□□□□□ -0.5
TCF4-238	ENST00000568169	COG7	P83436	770 aa		11.95	□□□□□ -0.5
TCF4-238	ENST00000568169	CYP4F3	Q08477	520 aa		11.95	□□□□□ -0.5
TCF4-238	ENST00000568169	INCA1	Q0VD86	236 aa		11.95	□□□□□ -0.5
TCF4-238	ENST00000568169	SUZ12	Q15022	739 aa	Known RBP	11.95	□□□□□ -0.5
TCF4-238	ENST00000568169	PTPRN	Q16849	979 aa		11.95	□□□□□ -0.5
TCF4-238	ENST00000568169	KIF19	Q2TAC6	998 aa		11.95	□□□□□ -0.5
TCF4-238	ENST00000568169	SPOPL	Q6IQ16	392 aa		11.95	□□□□□ -0.5
TCF4-238	ENST00000568169	SHC4	Q6S5L8	630 aa		11.95	□□□□□ -0.5
TCF4-238	ENST00000568169	SV2A	Q7L0J3	742 aa		11.95	□□□□□ -0.5
TCF4-238	ENST00000568169	ANKS1B	Q7Z6G8	1248 aa		11.95	□□□□□ -0.5
TCF4-238	ENST00000568169	TADA2B	Q86TJ2	420 aa		11.95	□□□□□ -0.5
TCF4-238	ENST00000568169	MARCH9	Q86YJ5	346 aa		11.95	□□□□□ -0.5
TCF4-238	ENST00000568169	SLC9A9	Q8IVB4	645 aa		11.95	□□□□□ -0.5
TCF4-238	ENST00000568169	SCUBE3	Q8IX30	993 aa		11.95	□□□□□ -0.5
TCF4-238	ENST00000568169	CPXM2	Q8N436	756 aa		11.95	□□□□□ -0.5
TCF4-238	ENST00000568169	GOLGA5	Q8TBA6	731 aa		11.95	□□□□□ -0.5
TCF4-238	ENST00000568169	TMC2	Q8TDI7	906 aa		11.95	□□□□□ -0.5
TCF4-238	ENST00000568169	TMEM174	Q8WUU8	243 aa		11.95	□□□□□ -0.5
TCF4-238	ENST00000568169	SLC2A11	Q9BYW1	496 aa		11.95	□□□□□ -0.5
TCF4-238	ENST00000568169	DCLK3	Q9C098	648 aa		11.95	□□□□□ -0.5
TCF4-238	ENST00000568169	BLZF1	Q9H2G9	400 aa		11.95	□□□□□ -0.5
TCF4-238	ENST00000568169	UPF2	Q9HAU5	1272 aa	Known RBP	11.95	□□□□□ -0.5
TCF4-238	ENST00000568169	MAGEF1	Q9HAY2	307 aa		11.95	□□□□□ -0.5
TCF4-238	ENST00000568169	OSGEP	Q9NPF4	335 aa		11.95	□□□□□ -0.5
TCF4-238	ENST00000568169	NAGPA	Q9UK23	515 aa		11.95	□□□□□ -0.5
TCF4-238	ENST00000568169	CLEC4E	Q9ULY5	219 aa		11.95	□□□□□ -0.5
TCF4-238	ENST00000568169	USP3	Q9Y6I4	520 aa		11.95	□□□□□ -0.5
TCF4-238	ENST00000568169	TNFSF14	O43557	240 aa		11.94	□□□□□ -0.5
TCF4-238	ENST00000568169	TIMM44	O43615	452 aa		11.94	□□□□□ -0.5
TCF4-238	ENST00000568169	CUTA	O60888	179 aa		11.94	□□□□□ -0.5
TCF4-238	ENST00000568169	ACADM	P11310	421 aa		11.94	□□□□□ -0.5
TCF4-238	ENST00000568169	TRIM21	P19474	475 aa	Known RBP	11.94	□□□□□ -0.5
TCF4-238	ENST00000568169	CORO1A	P31146	461 aa	Known RBP	11.94	□□□□□ -0.5
TCF4-238	ENST00000568169	AFF3	P51826	1226 aa	Known RBP	11.94	□□□□□ -0.5
TCF4-238	ENST00000568169	CAMK2G	Q13555	558 aa	Predicted RBP	11.94	□□□□□ -0.5
TCF4-238	ENST00000568169	TMEM215	Q68D42	235 aa		11.94	□□□□□ -0.5
TCF4-238	ENST00000568169	FAM124A	Q86V42	546 aa		11.94	□□□□□ -0.5
TCF4-238	ENST00000568169	PDCD7	Q8N8D1	485 aa	Known RBP	11.94	□□□□□ -0.5
TCF4-238	ENST00000568169	OR2T3	Q8NH03	318 aa		11.94	□□□□□ -0.5
TCF4-238	ENST00000568169	SORCS1	Q8WY21	1168 aa		11.94	□□□□□ -0.5
TCF4-238	ENST00000568169	CDK5RAP1	Q96SZ6	601 aa	Known RBP	11.94	□□□□□ -0.5
TCF4-238	ENST00000568169	NT5C1A	Q9BXI3	368 aa		11.94	□□□□□ -0.5
TCF4-238	ENST00000568169	AGO1	Q9UL18	857 aa	Known RBP	11.94	□□□□□ -0.5
TCF4-238	ENST00000568169	WDR3	Q9UNX4	943 aa	Known RBP eCLIP	11.94	□□□□□ -0.5
TCF4-238	ENST00000568169	ZBTB32	Q9Y2Y4	487 aa	Predicted RBP	11.94	□□□□□ -0.5
TCF4-238	ENST00000568169	SNX11	Q9Y5W9	270 aa		11.94	□□□□□ -0.5
TCF4-238	ENST00000568169	FLNB	O75369	2602 aa	Known RBP	11.93	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms