RNA–Protein interactions for RNA: ENST00000567935.1

COMMD4-221, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-221ENST00000567935 SMOQ99835 787 aa15.2■□□□□ 0.02
COMMD4-221ENST00000567935 TMEM175Q9BSA9 504 aa15.2■□□□□ 0.02
COMMD4-221ENST00000567935 COLEC11Q9BWP8 271 aa15.2■□□□□ 0.02
COMMD4-221ENST00000567935 POPDC2Q9HBU9 364 aa15.2■□□□□ 0.02
COMMD4-221ENST00000567935 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.2■□□□□ 0.023e-10■■■■■ 33.7
COMMD4-221ENST00000567935 ZNF148Q9UQR1 794 aa15.2■□□□□ 0.02
COMMD4-221ENST00000567935 NEU2Q9Y3R4 380 aa15.2■□□□□ 0.02
COMMD4-221ENST00000567935 TIMM13Q9Y5L4 95 aaPredicted RBP15.2■□□□□ 0.02
COMMD4-221ENST00000567935 TTC3P53804 2025 aa15.2■□□□□ 0.02
COMMD4-221ENST00000567935 GVINP1Q7Z2Y8 2422 aa15.19■□□□□ 0.02
COMMD4-221ENST00000567935 GOLGA8KD6RF30 607 aa15.19■□□□□ 0.02
COMMD4-221ENST00000567935 DDHD2O94830 711 aa15.19■□□□□ 0.02
COMMD4-221ENST00000567935 IBSPP21815 317 aaPredicted RBP15.19■□□□□ 0.02
COMMD4-221ENST00000567935 TGM2P21980 687 aa15.19■□□□□ 0.02
COMMD4-221ENST00000567935 PLTPP55058 493 aa15.19■□□□□ 0.02
COMMD4-221ENST00000567935 EIF3BP55884 814 aaKnown RBP15.19■□□□□ 0.02
COMMD4-221ENST00000567935 DAOAP59103 153 aa15.19■□□□□ 0.02
COMMD4-221ENST00000567935 GABPB1Q06547 395 aaPredicted RBP15.19■□□□□ 0.02
COMMD4-221ENST00000567935 DPYSL3Q14195 570 aa15.19■□□□□ 0.02
COMMD4-221ENST00000567935 CBX2Q14781 532 aaPredicted RBP15.19■□□□□ 0.02
COMMD4-221ENST00000567935 TAF5Q15542 800 aa15.19■□□□□ 0.02
COMMD4-221ENST00000567935 NFE2Q16621 373 aaPredicted RBP15.19■□□□□ 0.02
COMMD4-221ENST00000567935 KCNT1Q5JUK3 1230 aa15.19■□□□□ 0.02
COMMD4-221ENST00000567935 SCYL2Q6P3W7 929 aa15.19■□□□□ 0.02
COMMD4-221ENST00000567935 GSTA5Q7RTV2 222 aa15.19■□□□□ 0.02
COMMD4-221ENST00000567935 CROCCP2Q86T23 111 aa15.19■□□□□ 0.02
COMMD4-221ENST00000567935 NPAS4Q8IUM7 802 aa15.19■□□□□ 0.02
COMMD4-221ENST00000567935 ALLCQ8N6M5 410 aa15.19■□□□□ 0.02
COMMD4-221ENST00000567935 TSEN2Q8NCE0 465 aaKnown RBP15.19■□□□□ 0.02
COMMD4-221ENST00000567935 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.19■□□□□ 0.02
COMMD4-221ENST00000567935 FAF2Q96CS3 445 aa15.19■□□□□ 0.02
COMMD4-221ENST00000567935 RMDN1Q96DB5 314 aa15.19■□□□□ 0.02
COMMD4-221ENST00000567935 FUBP3Q96I24 572 aaKnown RBP eCLIP15.19■□□□□ 0.02
COMMD4-221ENST00000567935 NPY6RQ99463 290 aa15.19■□□□□ 0.02
COMMD4-221ENST00000567935 SH3GL2Q99962 352 aa15.19■□□□□ 0.02
COMMD4-221ENST00000567935 SNRNP25Q9BV90 132 aaKnown RBP15.19■□□□□ 0.02
COMMD4-221ENST00000567935 CALN1Q9BXU9 219 aa15.19■□□□□ 0.02
COMMD4-221ENST00000567935 TXLNGYQ9BZA5 131 aa15.19■□□□□ 0.02
COMMD4-221ENST00000567935 NEUROG2Q9H2A3 272 aa15.19■□□□□ 0.02
COMMD4-221ENST00000567935 PCDH9Q9HC56 1237 aa15.19■□□□□ 0.02
COMMD4-221ENST00000567935 MICAL3Q7RTP6 2002 aa15.19■□□□□ 0.02
COMMD4-221ENST00000567935 PTPRDP23468 1912 aa15.18■□□□□ 0.02
COMMD4-221ENST00000567935 CFAP69A5D8W1 941 aa15.18■□□□□ 0.02
COMMD4-221ENST00000567935 OR6C75A6NL08 312 aa15.18■□□□□ 0.02
COMMD4-221ENST00000567935 SMAPO00193 183 aa15.18■□□□□ 0.02
COMMD4-221ENST00000567935 MCF2LO15068 1137 aa15.18■□□□□ 0.02
COMMD4-221ENST00000567935 TADA2AO75478 443 aa15.18■□□□□ 0.02
COMMD4-221ENST00000567935 ZBED1O96006 694 aa15.18■□□□□ 0.02
COMMD4-221ENST00000567935 F9P00740 461 aa15.18■□□□□ 0.02
COMMD4-221ENST00000567935 KRT14P02533 472 aa15.18■□□□□ 0.02
COMMD4-221ENST00000567935 IGFBP6P24592 240 aaPredicted RBP15.18■□□□□ 0.02
COMMD4-221ENST00000567935 ADCY8P40145 1251 aa15.18■□□□□ 0.02
COMMD4-221ENST00000567935 OR1G1P47890 313 aa15.18■□□□□ 0.02
COMMD4-221ENST00000567935 ZNF135P52742 658 aaPredicted RBP15.18■□□□□ 0.02
COMMD4-221ENST00000567935 CBX1P83916 185 aa15.18■□□□□ 0.02
COMMD4-221ENST00000567935 DHX9Q08211 1270 aaKnown RBP15.18■□□□□ 0.02
COMMD4-221ENST00000567935 SMARCB1Q12824 385 aa15.18■□□□□ 0.02
COMMD4-221ENST00000567935 LLGL1Q15334 1064 aa15.18■□□□□ 0.02
COMMD4-221ENST00000567935 BNIPLQ7Z465 357 aa15.18■□□□□ 0.02
COMMD4-221ENST00000567935 ZNF280BQ86YH2 543 aa15.18■□□□□ 0.02
COMMD4-221ENST00000567935 SPATA2LQ8IUW3 424 aaPredicted RBP15.18■□□□□ 0.02
COMMD4-221ENST00000567935 DEFB106AQ8N104 65 aa15.18■□□□□ 0.02
COMMD4-221ENST00000567935 ZMIZ2Q8NF64 920 aa15.18■□□□□ 0.02
COMMD4-221ENST00000567935 ACTL9Q8TC94 416 aa15.18■□□□□ 0.02
COMMD4-221ENST00000567935 FBXO25Q8TCJ0 367 aa15.18■□□□□ 0.02
COMMD4-221ENST00000567935 CLEC4CQ8WTT0 213 aa15.18■□□□□ 0.02
COMMD4-221ENST00000567935 ACSF2Q96CM8 615 aaPredicted RBP15.18■□□□□ 0.02
COMMD4-221ENST00000567935 PGAP3Q96FM1 320 aaPredicted RBP15.18■□□□□ 0.02
COMMD4-221ENST00000567935 MSLNLQ96KJ4 702 aa15.18■□□□□ 0.02
COMMD4-221ENST00000567935 RNF157Q96PX1 679 aa15.18■□□□□ 0.02
COMMD4-221ENST00000567935 ULBP1Q9BZM6 244 aa15.18■□□□□ 0.02
COMMD4-221ENST00000567935 IGFLR1Q9H665 355 aa15.18■□□□□ 0.02
COMMD4-221ENST00000567935 PCDH18Q9HCL0 1135 aa15.18■□□□□ 0.02
COMMD4-221ENST00000567935 DNPEPQ9ULA0 475 aa15.18■□□□□ 0.02
COMMD4-221ENST00000567935 DMXL1Q9Y485 3027 aa15.18■□□□□ 0.02
COMMD4-221ENST00000567935 NLRC5Q86WI3 1866 aa15.18■□□□□ 0.02
COMMD4-221ENST00000567935 CARNS1A5YM72 827 aa15.17■□□□□ 0.02
COMMD4-221ENST00000567935 HHLA1C9JL84 531 aa15.17■□□□□ 0.02
COMMD4-221ENST00000567935 I3L4J1 428 aa15.17■□□□□ 0.02
COMMD4-221ENST00000567935 APOL1O14791 398 aa15.17■□□□□ 0.02
COMMD4-221ENST00000567935 BEST1O76090 585 aa15.17■□□□□ 0.02
COMMD4-221ENST00000567935 CSPG5O95196 566 aa15.17■□□□□ 0.02
COMMD4-221ENST00000567935 AMHP03971 560 aa15.17■□□□□ 0.02
COMMD4-221ENST00000567935 ALDH2P05091 517 aa15.17■□□□□ 0.02
COMMD4-221ENST00000567935 IVDP26440 423 aa15.17■□□□□ 0.02
COMMD4-221ENST00000567935 KLRC2P26717 231 aa15.17■□□□□ 0.02
COMMD4-221ENST00000567935 STIP1P31948 543 aaKnown RBP15.17■□□□□ 0.02
COMMD4-221ENST00000567935 HSD17B3P37058 310 aa15.17■□□□□ 0.02
COMMD4-221ENST00000567935 GGCXP38435 758 aa15.17■□□□□ 0.02
COMMD4-221ENST00000567935 SULT1E1P49888 294 aa15.17■□□□□ 0.02
COMMD4-221ENST00000567935 NUBP1P53384 320 aa15.17■□□□□ 0.02
COMMD4-221ENST00000567935 OTUD4Q01804 1114 aaKnown RBP15.17■□□□□ 0.02
COMMD4-221ENST00000567935 ADCY2Q08462 1091 aa15.17■□□□□ 0.02
COMMD4-221ENST00000567935 NOMO1Q15155 1222 aa15.17■□□□□ 0.02
COMMD4-221ENST00000567935 PAN2Q504Q3 1202 aaKnown RBP15.17■□□□□ 0.02
COMMD4-221ENST00000567935 SH3PXD2AQ5TCZ1 1133 aa15.17■□□□□ 0.02
COMMD4-221ENST00000567935 SLC9A4Q6AI14 798 aa15.17■□□□□ 0.02
COMMD4-221ENST00000567935 PM20D1Q6GTS8 502 aa15.17■□□□□ 0.02
COMMD4-221ENST00000567935 VSTM1Q6UX27 236 aa15.17■□□□□ 0.02
COMMD4-221ENST00000567935 TRMT10CQ7L0Y3 403 aaKnown RBP15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms