RNA–Protein interactions for RNA: ENST00000566452.1

BBS2-215, Transcript of Bardet-Biedl syndrome 2, human

TSL 2

Gene BBS2, Length 299 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBS2-215	ENST00000566452	THSD7A	Q9UPZ6	1657 aa		4.09	□□□□□ -1.76
BBS2-215	ENST00000566452	FMN2	Q9NZ56	1722 aa		4.09	□□□□□ -1.76
BBS2-215	ENST00000566452	COL14A1	Q05707	1796 aa	Known RBP	4.09	□□□□□ -1.76
BBS2-215	ENST00000566452	PMS2P1	A4D2B8	440 aa		4.08	□□□□□ -1.76
BBS2-215	ENST00000566452	TBKBP1	A7MCY6	615 aa		4.08	□□□□□ -1.76
BBS2-215	ENST00000566452	STX16-NPEPL1	H3BU86	382 aa		4.08	□□□□□ -1.76
BBS2-215	ENST00000566452	GTPBP1	O00178	669 aa	Known RBP	4.08	□□□□□ -1.76
BBS2-215	ENST00000566452	TOR1B	O14657	336 aa		4.08	□□□□□ -1.76
BBS2-215	ENST00000566452	STX16	O14662	325 aa		4.08	□□□□□ -1.76
BBS2-215	ENST00000566452	KIAA0355	O15063	1070 aa		4.08	□□□□□ -1.76
BBS2-215	ENST00000566452	CD3EAP	O15446	510 aa	Known RBP	4.08	□□□□□ -1.76
BBS2-215	ENST00000566452	P4HA2	O15460	535 aa		4.08	□□□□□ -1.76
BBS2-215	ENST00000566452	SEPT4	O43236	478 aa		4.08	□□□□□ -1.76
BBS2-215	ENST00000566452	KLK10	O43240	276 aa		4.08	□□□□□ -1.76
BBS2-215	ENST00000566452	DKC1	O60832	514 aa	Known RBP eCLIP	4.08	□□□□□ -1.76
BBS2-215	ENST00000566452	GUCY1B2	O75343	617 aa		4.08	□□□□□ -1.76
BBS2-215	ENST00000566452	VPS4B	O75351	444 aa		4.08	□□□□□ -1.76
BBS2-215	ENST00000566452	PTP4A3	O75365	173 aa		4.08	□□□□□ -1.76
BBS2-215	ENST00000566452	RPP40	O75818	363 aa	Known RBP	4.08	□□□□□ -1.76
BBS2-215	ENST00000566452	ADGRL2	O95490	1459 aa		4.08	□□□□□ -1.76
BBS2-215	ENST00000566452	ZNF888	P0CJ79	500 aa	Predicted RBP	4.08	□□□□□ -1.76
BBS2-215	ENST00000566452	PSMA4	P25789	261 aa	Known RBP	4.08	□□□□□ -1.76
BBS2-215	ENST00000566452	ARL3	P36405	182 aa		4.08	□□□□□ -1.76
BBS2-215	ENST00000566452	PAFAH1B1	P43034	410 aa		4.08	□□□□□ -1.76
BBS2-215	ENST00000566452	PXN	P49023	591 aa	Predicted RBP	4.08	□□□□□ -1.76
BBS2-215	ENST00000566452	PRKAG1	P54619	331 aa		4.08	□□□□□ -1.76
BBS2-215	ENST00000566452	ADAM17	P78536	824 aa		4.08	□□□□□ -1.76
BBS2-215	ENST00000566452	AKAP12	Q02952	1782 aa		4.08	□□□□□ -1.76
BBS2-215	ENST00000566452	CALD1	Q05682	793 aa	Known RBP	4.08	□□□□□ -1.76
BBS2-215	ENST00000566452	SF3A3	Q12874	501 aa	Known RBP eCLIP	4.08	□□□□□ -1.76
BBS2-215	ENST00000566452	NFYC	Q13952	458 aa		4.08	□□□□□ -1.76
BBS2-215	ENST00000566452	GPR162	Q16538	588 aa		4.08	□□□□□ -1.76
BBS2-215	ENST00000566452	TBRG1	Q3YBR2	411 aa		4.08	□□□□□ -1.76
BBS2-215	ENST00000566452	SNX30	Q5VWJ9	437 aa		4.08	□□□□□ -1.76
BBS2-215	ENST00000566452	SLC30A6	Q6NXT4	461 aa		4.08	□□□□□ -1.76
BBS2-215	ENST00000566452	KRT74	Q7RTS7	529 aa		4.08	□□□□□ -1.76
BBS2-215	ENST00000566452	ADGRE4P	Q86SQ3	457 aa		4.08	□□□□□ -1.76
BBS2-215	ENST00000566452	TRABD2A	Q86V40	505 aa		4.08	□□□□□ -1.76
BBS2-215	ENST00000566452	IGDCC3	Q8IVU1	814 aa		4.08	□□□□□ -1.76
BBS2-215	ENST00000566452	KLHL36	Q8N4N3	616 aa		4.08	□□□□□ -1.76
BBS2-215	ENST00000566452	HMGB4	Q8WW32	186 aa		4.08	□□□□□ -1.76
BBS2-215	ENST00000566452	TFAP2C	Q92754	450 aa		4.08	□□□□□ -1.76
BBS2-215	ENST00000566452	YTHDC1	Q96MU7	727 aa	Known RBP	4.08	□□□□□ -1.76
BBS2-215	ENST00000566452	TRIM5	Q9C035	493 aa		4.08	□□□□□ -1.76
BBS2-215	ENST00000566452	TMEM168	Q9H0V1	697 aa		4.08	□□□□□ -1.76
BBS2-215	ENST00000566452	SYNC	Q9H7C4	482 aa		4.08	□□□□□ -1.76
BBS2-215	ENST00000566452	FSCN3	Q9NQT6	498 aa		4.08	□□□□□ -1.76
BBS2-215	ENST00000566452	PLSCR4	Q9NRQ2	329 aa		4.08	□□□□□ -1.76
BBS2-215	ENST00000566452	VPS51	Q9UID3	782 aa		4.08	□□□□□ -1.76
BBS2-215	ENST00000566452	HSF4	Q9ULV5	492 aa		4.08	□□□□□ -1.76
BBS2-215	ENST00000566452	CLCA2	Q9UQC9	943 aa		4.08	□□□□□ -1.76
BBS2-215	ENST00000566452	CDYL	Q9Y232	598 aa		4.08	□□□□□ -1.76
BBS2-215	ENST00000566452	MYRF	Q9Y2G1	1151 aa		4.08	□□□□□ -1.76
BBS2-215	ENST00000566452	PMF1-BGLAP	U3KQ54	211 aa		4.08	□□□□□ -1.76
BBS2-215	ENST00000566452	DLC1	Q96QB1	1528 aa		4.07	□□□□□ -1.76
BBS2-215	ENST00000566452	LRPPRC	P42704	1394 aa	Known RBP	4.07	□□□□□ -1.76
BBS2-215	ENST00000566452	SPATA31A3	Q5VYP0	1347 aa		4.07	□□□□□ -1.76
BBS2-215	ENST00000566452	FAM90A20P	A6NIJ5	464 aa		4.07	□□□□□ -1.76
BBS2-215	ENST00000566452	PRR5-ARHGAP8	B1AHC4	643 aa		4.07	□□□□□ -1.76
BBS2-215	ENST00000566452	AP3D1	O14617	1153 aa		4.07	□□□□□ -1.76
BBS2-215	ENST00000566452	HOXA3	O43365	443 aa	Predicted RBP	4.07	□□□□□ -1.76
BBS2-215	ENST00000566452	TRIM13	O60858	407 aa		4.07	□□□□□ -1.76
BBS2-215	ENST00000566452	TAF5L	O75529	589 aa		4.07	□□□□□ -1.76
BBS2-215	ENST00000566452	F9	P00740	461 aa		4.07	□□□□□ -1.76
BBS2-215	ENST00000566452	DNTT	P04053	509 aa		4.07	□□□□□ -1.76
BBS2-215	ENST00000566452	CLEC3B	P05452	202 aa		4.07	□□□□□ -1.76
BBS2-215	ENST00000566452	ITGB1	P05556	798 aa		4.07	□□□□□ -1.76
BBS2-215	ENST00000566452	CPA1	P15085	419 aa		4.07	□□□□□ -1.76
BBS2-215	ENST00000566452	KCNA3	P22001	575 aa		4.07	□□□□□ -1.76
BBS2-215	ENST00000566452	RBL1	P28749	1068 aa		4.07	□□□□□ -1.76
BBS2-215	ENST00000566452	MAGEA10	P43363	369 aa	Predicted RBP	4.07	□□□□□ -1.76
BBS2-215	ENST00000566452	LIMS1	P48059	325 aa		4.07	□□□□□ -1.76
BBS2-215	ENST00000566452	DGKE	P52429	567 aa		4.07	□□□□□ -1.76
BBS2-215	ENST00000566452	LILRA4	P59901	499 aa		4.07	□□□□□ -1.76
BBS2-215	ENST00000566452	RPP30	P78346	268 aa	Known RBP	4.07	□□□□□ -1.76
BBS2-215	ENST00000566452	ROR1	Q01973	937 aa		4.07	□□□□□ -1.76
BBS2-215	ENST00000566452	ZNF844	Q08AG5	666 aa		4.07	□□□□□ -1.76
BBS2-215	ENST00000566452	WTAP	Q15007	396 aa		4.07	□□□□□ -1.76
BBS2-215	ENST00000566452	SEC23B	Q15437	767 aa		4.07	□□□□□ -1.76
BBS2-215	ENST00000566452	ZIK1	Q3SY52	487 aa	Predicted RBP	4.07	□□□□□ -1.76
BBS2-215	ENST00000566452	RILPL1	Q5EBL4	403 aa		4.07	□□□□□ -1.76
BBS2-215	ENST00000566452	CERCAM	Q5T4B2	595 aa		4.07	□□□□□ -1.76
BBS2-215	ENST00000566452	TCERG1L	Q5VWI1	586 aa		4.07	□□□□□ -1.76
BBS2-215	ENST00000566452	ANKS6	Q68DC2	871 aa		4.07	□□□□□ -1.76
BBS2-215	ENST00000566452	TAPT1	Q6NXT6	567 aa		4.07	□□□□□ -1.76
BBS2-215	ENST00000566452	RASGRP2	Q7LDG7	609 aa		4.07	□□□□□ -1.76
BBS2-215	ENST00000566452	CPLX4	Q7Z7G2	160 aa		4.07	□□□□□ -1.76
BBS2-215	ENST00000566452	RALYL	Q86SE5	291 aa	Known RBP	4.07	□□□□□ -1.76
BBS2-215	ENST00000566452	ZNF280B	Q86YH2	543 aa		4.07	□□□□□ -1.76
BBS2-215	ENST00000566452	DIS3L2	Q8IYB7	885 aa	Known RBP	4.07	□□□□□ -1.76
BBS2-215	ENST00000566452	ADSSL1	Q8N142	457 aa		4.07	□□□□□ -1.76
BBS2-215	ENST00000566452	CFAP52	Q8N1V2	620 aa		4.07	□□□□□ -1.76
BBS2-215	ENST00000566452	ANKRD44	Q8N8A2	993 aa		4.07	□□□□□ -1.76
BBS2-215	ENST00000566452	PSD4	Q8NDX1	1056 aa		4.07	□□□□□ -1.76
BBS2-215	ENST00000566452	NFKBID	Q8NI38	313 aa		4.07	□□□□□ -1.76
BBS2-215	ENST00000566452	NELL1	Q92832	810 aa		4.07	□□□□□ -1.76
BBS2-215	ENST00000566452	ATP2A3	Q93084	1043 aa		4.07	□□□□□ -1.76
BBS2-215	ENST00000566452	KTI12	Q96EK9	354 aa	Predicted RBP	4.07	□□□□□ -1.76
BBS2-215	ENST00000566452	APOPT1	Q96IL0	206 aa		4.07	□□□□□ -1.76
BBS2-215	ENST00000566452	PWWP2A	Q96N64	755 aa		4.07	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms