RNA–Protein interactions for RNA: ENST00000566016.5

SHCBP1-205, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 1 (best)

Gene SHCBP1, Length 1,482 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-205ENST00000566016 ADAM22Q9P0K1 906 aa21.95■■□□□ 1.1
SHCBP1-205ENST00000566016 AGO1Q9UL18 857 aaKnown RBP21.95■■□□□ 1.1
SHCBP1-205ENST00000566016 SIT1Q9Y3P8 196 aa21.95■■□□□ 1.1
SHCBP1-205ENST00000566016 TRDMT1O14717 391 aaKnown RBP21.94■■□□□ 1.1
SHCBP1-205ENST00000566016 GRAP2O75791 330 aa21.94■■□□□ 1.1
SHCBP1-205ENST00000566016 HMBSP08397 361 aa21.94■■□□□ 1.1
SHCBP1-205ENST00000566016 TPM1P09493 284 aa21.94■■□□□ 1.1
SHCBP1-205ENST00000566016 ADH5P11766 374 aa21.94■■□□□ 1.1
SHCBP1-205ENST00000566016 CD72P21854 359 aa21.94■■□□□ 1.1
SHCBP1-205ENST00000566016 TARSP26639 723 aaKnown RBP21.94■■□□□ 1.1
SHCBP1-205ENST00000566016 EIF2DP41214 584 aaKnown RBP21.94■■□□□ 1.1
SHCBP1-205ENST00000566016 TBX4P57082 545 aa21.94■■□□□ 1.1
SHCBP1-205ENST00000566016 GAB4Q2WGN9 574 aa21.94■■□□□ 1.1
SHCBP1-205ENST00000566016 C2CD6Q53TS8 623 aa21.94■■□□□ 1.1
SHCBP1-205ENST00000566016 LY6G5CQ5SRR4 150 aa21.94■■□□□ 1.1
SHCBP1-205ENST00000566016 ACAD10Q6JQN1 1059 aa21.94■■□□□ 1.1
SHCBP1-205ENST00000566016 DRC7Q8IY82 874 aa21.94■■□□□ 1.1
SHCBP1-205ENST00000566016 CCDC105Q8IYK2 499 aa21.94■■□□□ 1.1
SHCBP1-205ENST00000566016 NT5C3BQ969T7 300 aa21.94■■□□□ 1.1
SHCBP1-205ENST00000566016 TMEM59LQ9UK28 342 aa21.94■■□□□ 1.1
SHCBP1-205ENST00000566016 STAP1Q9ULZ2 295 aa21.94■■□□□ 1.1
SHCBP1-205ENST00000566016 STK25O00506 426 aa21.93■■□□□ 1.1
SHCBP1-205ENST00000566016 NCAM2O15394 837 aa21.93■■□□□ 1.1
SHCBP1-205ENST00000566016 MAGEA9P43362 315 aa21.93■■□□□ 1.1
SHCBP1-205ENST00000566016 GAD2Q05329 585 aa21.93■■□□□ 1.1
SHCBP1-205ENST00000566016 UBXN2BQ14CS0 331 aa21.93■■□□□ 1.1
SHCBP1-205ENST00000566016 TDRD12Q587J7 1177 aaKnown RBP21.93■■□□□ 1.1
SHCBP1-205ENST00000566016 VPS36Q86VN1 386 aa21.93■■□□□ 1.1
SHCBP1-205ENST00000566016 DENND1CQ8IV53 801 aa21.93■■□□□ 1.1
SHCBP1-205ENST00000566016 C3orf20Q8ND61 904 aa21.93■■□□□ 1.1
SHCBP1-205ENST00000566016 CLDN23Q96B33 292 aa21.93■■□□□ 1.1
SHCBP1-205ENST00000566016 PGAP3Q96FM1 320 aaPredicted RBP21.93■■□□□ 1.1
SHCBP1-205ENST00000566016 MRFAP1L1Q96HT8 127 aa21.93■■□□□ 1.1
SHCBP1-205ENST00000566016 FCRL2Q96LA5 508 aaPredicted RBP21.93■■□□□ 1.1
SHCBP1-205ENST00000566016 IRX2Q9BZI1 471 aaPredicted RBP21.93■■□□□ 1.1
SHCBP1-205ENST00000566016 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP21.93■■□□□ 1.1
SHCBP1-205ENST00000566016 WDFY4Q6ZS81 3184 aa21.93■■□□□ 1.1
SHCBP1-205ENST00000566016 FAM170BA6NMN3 283 aa21.92■■□□□ 1.1
SHCBP1-205ENST00000566016 DDX3XO00571 662 aaKnown RBP eCLIP21.92■■□□□ 1.1
SHCBP1-205ENST00000566016 RPS9P46781 194 aaKnown RBP21.92■■□□□ 1.1
SHCBP1-205ENST00000566016 NUBP1P53384 320 aa21.92■■□□□ 1.1
SHCBP1-205ENST00000566016 MTA1Q13330 715 aa21.92■■□□□ 1.1
SHCBP1-205ENST00000566016 TMEM196Q5HYL7 178 aa21.92■■□□□ 1.1
SHCBP1-205ENST00000566016 OR8K1Q8NGG5 319 aa21.92■■□□□ 1.1
SHCBP1-205ENST00000566016 ADAM32Q8TC27 787 aa21.92■■□□□ 1.1
SHCBP1-205ENST00000566016 NPY6RQ99463 290 aa21.92■■□□□ 1.1
SHCBP1-205ENST00000566016 DLGAP2Q9P1A6 1054 aa21.92■■□□□ 1.1
SHCBP1-205ENST00000566016 CACNA1IQ9P0X4 2223 aa21.91■■□□□ 1.1
SHCBP1-205ENST00000566016 GOLGA8SH3BPF8 625 aa21.91■■□□□ 1.1
SHCBP1-205ENST00000566016 SLC2A3P11169 496 aa21.91■■□□□ 1.1
SHCBP1-205ENST00000566016 SKILP12757 684 aa21.91■■□□□ 1.1
SHCBP1-205ENST00000566016 AVPR2P30518 371 aa21.91■■□□□ 1.1
SHCBP1-205ENST00000566016 GBP1P32455 592 aa21.91■■□□□ 1.1
SHCBP1-205ENST00000566016 SLC11A2P49281 568 aa21.91■■□□□ 1.1
SHCBP1-205ENST00000566016 PITX1P78337 314 aaPredicted RBP21.91■■□□□ 1.1
SHCBP1-205ENST00000566016 SLC25A52Q3SY17 297 aa21.91■■□□□ 1.1
SHCBP1-205ENST00000566016 ADGRF1Q5T601 910 aa21.91■■□□□ 1.1
SHCBP1-205ENST00000566016 TMEM25Q86YD3 366 aa21.91■■□□□ 1.1
SHCBP1-205ENST00000566016 ETFBKMTQ8IXQ9 262 aa21.91■■□□□ 1.1
SHCBP1-205ENST00000566016 TMEM105Q8N8V8 129 aa21.91■■□□□ 1.1
SHCBP1-205ENST00000566016 P2RY13Q9BPV8 354 aa21.91■■□□□ 1.1
SHCBP1-205ENST00000566016 FAM204AQ9H8W3 233 aa21.91■■□□□ 1.1
SHCBP1-205ENST00000566016 DDIT4Q9NX09 232 aa21.91■■□□□ 1.1
SHCBP1-205ENST00000566016 MTF2Q9Y483 593 aaPredicted RBP21.91■■□□□ 1.1
SHCBP1-205ENST00000566016 GFRA2O00451 464 aa21.9■■□□□ 1.1
SHCBP1-205ENST00000566016 MFAP3LO75121 409 aa21.9■■□□□ 1.1
SHCBP1-205ENST00000566016 APOEP02649 317 aa21.9■■□□□ 1.1
SHCBP1-205ENST00000566016 FLT3P36888 993 aa21.9■■□□□ 1.1
SHCBP1-205ENST00000566016 OPRD1P41143 372 aa21.9■■□□□ 1.1
SHCBP1-205ENST00000566016 VCPP55072 806 aaKnown RBP21.9■■□□□ 1.1
SHCBP1-205ENST00000566016 TBX2Q13207 712 aaPredicted RBP21.9■■□□□ 1.1
SHCBP1-205ENST00000566016 FZD5Q13467 585 aa21.9■■□□□ 1.1
SHCBP1-205ENST00000566016 CCINQ13939 588 aa21.9■■□□□ 1.1
SHCBP1-205ENST00000566016 CNGA4Q8IV77 575 aa21.9■■□□□ 1.1
SHCBP1-205ENST00000566016 MCOLN2Q8IZK6 566 aa21.9■■□□□ 1.1
SHCBP1-205ENST00000566016 CD101Q93033 1021 aa21.9■■□□□ 1.1
SHCBP1-205ENST00000566016 IER2Q9BTL4 223 aa21.9■■□□□ 1.1
SHCBP1-205ENST00000566016 METTL5Q9NRN9 209 aaKnown RBP21.9■■□□□ 1.1
SHCBP1-205ENST00000566016 SLTMQ9NWH9 1034 aaKnown RBP eCLIP21.9■■□□□ 1.1
SHCBP1-205ENST00000566016 TAS2R14Q9NYV8 317 aa21.9■■□□□ 1.1
SHCBP1-205ENST00000566016 NDRG2Q9UN36 371 aaKnown RBP21.9■■□□□ 1.1
SHCBP1-205ENST00000566016 TCRBV5S1A1TA0A578 114 aa21.9■■□□□ 1.1
SHCBP1-205ENST00000566016 PALM2-AKAP2B1ALY0 433 aaPredicted RBP21.9■■□□□ 1.1
SHCBP1-205ENST00000566016 PI15O43692 258 aa21.9■■□□□ 1.1
SHCBP1-205ENST00000566016 CACNG3O60359 315 aa21.9■■□□□ 1.1
SHCBP1-205ENST00000566016 F9P00740 461 aa21.9■■□□□ 1.1
SHCBP1-205ENST00000566016 PENKP01210 267 aaPredicted RBP21.9■■□□□ 1.1
SHCBP1-205ENST00000566016 CHRNB1P11230 501 aa21.9■■□□□ 1.1
SHCBP1-205ENST00000566016 DRD1P21728 446 aa21.9■■□□□ 1.1
SHCBP1-205ENST00000566016 ZNF75DP51815 510 aa21.9■■□□□ 1.1
SHCBP1-205ENST00000566016 RNASE9P60153 205 aaKnown RBP21.9■■□□□ 1.1
SHCBP1-205ENST00000566016 GRSF1Q12849 480 aaKnown RBP eCLIP21.9■■□□□ 1.1
SHCBP1-205ENST00000566016 LRRC32Q14392 662 aa21.9■■□□□ 1.1
SHCBP1-205ENST00000566016 PPP2R5DQ14738 602 aa21.9■■□□□ 1.1
SHCBP1-205ENST00000566016 PON2Q15165 354 aa21.9■■□□□ 1.1
SHCBP1-205ENST00000566016 DGKKQ5KSL6 1271 aa21.9■■□□□ 1.1
SHCBP1-205ENST00000566016 OTUD1Q5VV17 481 aaPredicted RBP21.9■■□□□ 1.1
SHCBP1-205ENST00000566016 BNIPLQ7Z465 357 aa21.9■■□□□ 1.1
SHCBP1-205ENST00000566016 SYNPOQ8N3V7 929 aa21.9■■□□□ 1.1
SHCBP1-205ENST00000566016 BTN2A3PQ96KV6 586 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms