RNA–Protein interactions for RNA: ENST00000565662.5

USB1-211, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-211ENST00000565662 GLI1P08151 1106 aa17.46■□□□□ 0.39
USB1-211ENST00000565662 GBP1P32455 592 aa17.46■□□□□ 0.39
USB1-211ENST00000565662 SPEM2Q0P670 501 aa17.46■□□□□ 0.39
USB1-211ENST00000565662 FYB2Q5VWT5 728 aa17.46■□□□□ 0.39
USB1-211ENST00000565662 PMF1Q6P1K2 205 aa17.46■□□□□ 0.39
USB1-211ENST00000565662 BHLHA9Q7RTU4 235 aa17.46■□□□□ 0.39
USB1-211ENST00000565662 DGLUCYQ7Z3D6 616 aa17.46■□□□□ 0.39
USB1-211ENST00000565662 DENND1CQ8IV53 801 aa17.46■□□□□ 0.39
USB1-211ENST00000565662 CCDC117Q8IWD4 279 aaPredicted RBP17.46■□□□□ 0.39
USB1-211ENST00000565662 DCLK2Q8N568 766 aa17.46■□□□□ 0.39
USB1-211ENST00000565662 CCDC33Q8N5R6 958 aa17.46■□□□□ 0.39
USB1-211ENST00000565662 ANKRD20A12PQ8NF67 263 aa17.46■□□□□ 0.39
USB1-211ENST00000565662 MDGA1Q8NFP4 955 aa17.46■□□□□ 0.39
USB1-211ENST00000565662 OLIG1Q8TAK6 271 aa17.46■□□□□ 0.39
USB1-211ENST00000565662 DDI1Q8WTU0 396 aa17.46■□□□□ 0.39
USB1-211ENST00000565662 TFAP2BQ92481 460 aa17.46■□□□□ 0.39
USB1-211ENST00000565662 SHC3Q92529 594 aa17.46■□□□□ 0.39
USB1-211ENST00000565662 GABRG3Q99928 467 aa17.46■□□□□ 0.39
USB1-211ENST00000565662 NDST4Q9H3R1 872 aa17.46■□□□□ 0.39
USB1-211ENST00000565662 FBRSQ9HAH7 460 aa17.46■□□□□ 0.39
USB1-211ENST00000565662 ST7Q9NRC1 585 aa17.46■□□□□ 0.39
USB1-211ENST00000565662 GPR179Q6PRD1 2367 aa17.46■□□□□ 0.39
USB1-211ENST00000565662 TCRBV21S2A2A0A5A6 115 aa17.45■□□□□ 0.38
USB1-211ENST00000565662 SGK1O00141 431 aa17.45■□□□□ 0.38
USB1-211ENST00000565662 TULP2O00295 520 aa17.45■□□□□ 0.38
USB1-211ENST00000565662 CAPN9O14815 690 aa17.45■□□□□ 0.38
USB1-211ENST00000565662 LETM1O95202 739 aaPredicted RBP17.45■□□□□ 0.38
USB1-211ENST00000565662 HMBSP08397 361 aa17.45■□□□□ 0.38
USB1-211ENST00000565662 MPLP40238 635 aa17.45■□□□□ 0.38
USB1-211ENST00000565662 GPD2P43304 727 aa17.45■□□□□ 0.38
USB1-211ENST00000565662 PXNP49023 591 aaPredicted RBP17.45■□□□□ 0.38
USB1-211ENST00000565662 ARID5AQ03989 594 aa17.45■□□□□ 0.38
USB1-211ENST00000565662 LPAL2Q16609 132 aa17.45■□□□□ 0.38
USB1-211ENST00000565662 PMS2CLQ68D20 193 aa17.45■□□□□ 0.38
USB1-211ENST00000565662 LPCAT2Q7L5N7 544 aa17.45■□□□□ 0.38
USB1-211ENST00000565662 KBTBD6Q86V97 674 aa17.45■□□□□ 0.38
USB1-211ENST00000565662 MSANTD4Q8NCY6 345 aa17.45■□□□□ 0.38
USB1-211ENST00000565662 ZNF606Q8WXB4 792 aa17.45■□□□□ 0.38
USB1-211ENST00000565662 KAT5Q92993 513 aa17.45■□□□□ 0.38
USB1-211ENST00000565662 FAM149B1Q96BN6 582 aa17.45■□□□□ 0.38
USB1-211ENST00000565662 TUBGCP2Q9BSJ2 902 aa17.45■□□□□ 0.38
USB1-211ENST00000565662 POPDC2Q9HBU9 364 aa17.45■□□□□ 0.38
USB1-211ENST00000565662 ASNSD1Q9NWL6 643 aa17.45■□□□□ 0.38
USB1-211ENST00000565662 PCDHGC3Q9UN70 934 aa17.45■□□□□ 0.38
USB1-211ENST00000565662 TLR6Q9Y2C9 796 aa17.45■□□□□ 0.38
USB1-211ENST00000565662 RNF225M0QZC1 329 aaPredicted RBP17.44■□□□□ 0.38
USB1-211ENST00000565662 AP5Z1O43299 807 aa17.44■□□□□ 0.38
USB1-211ENST00000565662 IGLV3-27P01718 113 aa17.44■□□□□ 0.38
USB1-211ENST00000565662 APOEP02649 317 aa17.44■□□□□ 0.38
USB1-211ENST00000565662 KLKB1P03952 638 aa17.44■□□□□ 0.38
USB1-211ENST00000565662 SLC2A3P11169 496 aa17.44■□□□□ 0.38
USB1-211ENST00000565662 NCAM1P13591 858 aa17.44■□□□□ 0.38
USB1-211ENST00000565662 TGM1P22735 817 aa17.44■□□□□ 0.38
USB1-211ENST00000565662 P2RY2P41231 377 aa17.44■□□□□ 0.38
USB1-211ENST00000565662 SRSF5Q13243 272 aaKnown RBP17.44■□□□□ 0.38
USB1-211ENST00000565662 RSPO4Q2I0M5 234 aaPredicted RBP17.44■□□□□ 0.38
USB1-211ENST00000565662 DPCR1Q3MIW9 517 aa17.44■□□□□ 0.38
USB1-211ENST00000565662 AASDHQ4L235 1098 aaPredicted RBP17.44■□□□□ 0.38
USB1-211ENST00000565662 VWA3BQ502W6 1294 aa17.44■□□□□ 0.38
USB1-211ENST00000565662 TOGARAM2Q6ZUX3 1019 aa17.44■□□□□ 0.38
USB1-211ENST00000565662 ZDHHC17Q8IUH5 632 aa17.44■□□□□ 0.38
USB1-211ENST00000565662 PGBD3Q8N328 593 aa17.44■□□□□ 0.38
USB1-211ENST00000565662 IPO4Q8TEX9 1081 aaKnown RBP17.44■□□□□ 0.38
USB1-211ENST00000565662 WBP2Q969T9 261 aa17.44■□□□□ 0.38
USB1-211ENST00000565662 RMDN1Q96DB5 314 aa17.44■□□□□ 0.38
USB1-211ENST00000565662 SLC4A5Q9BY07 1137 aa17.44■□□□□ 0.38
USB1-211ENST00000565662 DUSP15Q9H1R2 295 aaPredicted RBP17.44■□□□□ 0.38
USB1-211ENST00000565662 LHX5Q9H2C1 402 aa17.44■□□□□ 0.38
USB1-211ENST00000565662 SLC12A6Q9UHW9 1150 aa17.44■□□□□ 0.38
USB1-211ENST00000565662 SPTBN4Q9H254 2564 aa17.43■□□□□ 0.38
USB1-211ENST00000565662 MYO18AQ92614 2054 aaKnown RBP17.43■□□□□ 0.38
USB1-211ENST00000565662 SLC30A4O14863 429 aa17.43■□□□□ 0.38
USB1-211ENST00000565662 CISD3P0C7P0 127 aa17.43■□□□□ 0.38
USB1-211ENST00000565662 CHRM1P11229 460 aaPredicted RBP17.43■□□□□ 0.38
USB1-211ENST00000565662 PON1P27169 355 aa17.43■□□□□ 0.38
USB1-211ENST00000565662 RGS7P49802 495 aa17.43■□□□□ 0.38
USB1-211ENST00000565662 TBX4P57082 545 aa17.43■□□□□ 0.38
USB1-211ENST00000565662 EFHC1Q5JVL4 640 aa17.43■□□□□ 0.38
USB1-211ENST00000565662 PLA2G2CQ5R387 149 aa17.43■□□□□ 0.38
USB1-211ENST00000565662 ACBD5Q5T8D3 534 aaPredicted RBP17.43■□□□□ 0.38
USB1-211ENST00000565662 TMEM92Q6UXU6 159 aa17.43■□□□□ 0.38
USB1-211ENST00000565662 CYP2U1Q7Z449 544 aa17.43■□□□□ 0.38
USB1-211ENST00000565662 TMEM110Q86TL2 294 aa17.43■□□□□ 0.38
USB1-211ENST00000565662 AHI1Q8N157 1196 aa17.43■□□□□ 0.38
USB1-211ENST00000565662 ENOX1Q8TC92 643 aaKnown RBP17.43■□□□□ 0.38
USB1-211ENST00000565662 HMGB4Q8WW32 186 aa17.43■□□□□ 0.38
USB1-211ENST00000565662 EDEM1Q92611 657 aa17.43■□□□□ 0.38
USB1-211ENST00000565662 TMA16Q96EY4 203 aaKnown RBP17.43■□□□□ 0.38
USB1-211ENST00000565662 CRACR2AQ9BSW2 395 aa17.43■□□□□ 0.38
USB1-211ENST00000565662 ARRDC1-AS1Q9H2J1 176 aa17.43■□□□□ 0.38
USB1-211ENST00000565662 RRN3Q9NYV6 651 aa17.43■□□□□ 0.38
USB1-211ENST00000565662 BCLAF3A2AJT9 711 aaKnown RBP17.42■□□□□ 0.38
USB1-211ENST00000565662 MAP3K13O43283 966 aa17.42■□□□□ 0.38
USB1-211ENST00000565662 SYNCRIPO60506 623 aaKnown RBP17.42■□□□□ 0.38
USB1-211ENST00000565662 ADAM23O75077 832 aa17.42■□□□□ 0.38
USB1-211ENST00000565662 ATP5BP06576 529 aaKnown RBP17.42■□□□□ 0.38
USB1-211ENST00000565662 KRT9P35527 623 aa17.42■□□□□ 0.38
USB1-211ENST00000565662 USP8P40818 1118 aa17.42■□□□□ 0.38
USB1-211ENST00000565662 PDCLQ13371 301 aa17.42■□□□□ 0.38
USB1-211ENST00000565662 ARHGAP44Q17R89 818 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms