RNA–Protein interactions for RNA: ENST00000564845.5

CHD9-213, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 11,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-213ENST00000564845 ANKRD36BP1Q96IX9 119 aa3.46□□□□□ -1.85
CHD9-213ENST00000564845 PRMT1Q99873 361 aaKnown RBP3.46□□□□□ -1.85
CHD9-213ENST00000564845 ZNF518BQ9C0D4 1074 aa3.46□□□□□ -1.85
CHD9-213ENST00000564845 TAF1DQ9H5J8 278 aaPredicted RBP3.46□□□□□ -1.85
CHD9-213ENST00000564845 MIOSQ9NXC5 875 aa3.46□□□□□ -1.85
CHD9-213ENST00000564845 SAGE1Q9NXZ1 904 aa3.46□□□□□ -1.85
CHD9-213ENST00000564845 STX18Q9P2W9 335 aaKnown RBP3.46□□□□□ -1.85
CHD9-213ENST00000564845 CIDEBQ9UHD4 219 aa3.46□□□□□ -1.85
CHD9-213ENST00000564845 AMFRQ9UKV5 643 aa3.46□□□□□ -1.85
CHD9-213ENST00000564845 HPCAL4Q9UM19 191 aa3.46□□□□□ -1.85
CHD9-213ENST00000564845 FIS1Q9Y3D6 152 aa3.46□□□□□ -1.85
CHD9-213ENST00000564845 UBIAD1Q9Y5Z9 338 aa3.46□□□□□ -1.85
CHD9-213ENST00000564845 ITIH6Q6UXX5 1313 aa3.46□□□□□ -1.86
CHD9-213ENST00000564845 GHRP10912 638 aa3.46□□□□□ -1.86
CHD9-213ENST00000564845 CD1EP15812 388 aa3.46□□□□□ -1.86
CHD9-213ENST00000564845 PECAM1P16284 738 aaPredicted RBP3.46□□□□□ -1.86
CHD9-213ENST00000564845 JUNDP17535 347 aa3.46□□□□□ -1.86
CHD9-213ENST00000564845 RFC1P35251 1148 aaPredicted RBP3.46□□□□□ -1.86
CHD9-213ENST00000564845 SOX4Q06945 474 aaPredicted RBP3.46□□□□□ -1.86
CHD9-213ENST00000564845 IL18R1Q13478 541 aa3.46□□□□□ -1.86
CHD9-213ENST00000564845 DUS1LQ6P1R4 473 aaKnown RBP3.46□□□□□ -1.86
CHD9-213ENST00000564845 GPR142Q7Z601 462 aa3.46□□□□□ -1.86
CHD9-213ENST00000564845 CYP4X1Q8N118 509 aa3.46□□□□□ -1.86
CHD9-213ENST00000564845 PDIK1LQ8N165 341 aa3.46□□□□□ -1.86
CHD9-213ENST00000564845 ZNF366Q8N895 744 aa3.46□□□□□ -1.86
CHD9-213ENST00000564845 REPS2Q8NFH8 660 aa3.46□□□□□ -1.86
CHD9-213ENST00000564845 RAPGEF5Q92565 580 aa3.46□□□□□ -1.86
CHD9-213ENST00000564845 AZIN2Q96A70 460 aa3.46□□□□□ -1.86
CHD9-213ENST00000564845 SCLYQ96I15 445 aa3.46□□□□□ -1.86
CHD9-213ENST00000564845 APOL5Q9BWW9 433 aa3.46□□□□□ -1.86
CHD9-213ENST00000564845 FRMPD4Q14CM0 1322 aa3.46□□□□□ -1.86
CHD9-213ENST00000564845 TARSL2A2RTX5 802 aaKnown RBP3.46□□□□□ -1.86
CHD9-213ENST00000564845 MAP2K7O14733 419 aa3.46□□□□□ -1.86
CHD9-213ENST00000564845 TJP3O95049 919 aa3.46□□□□□ -1.86
CHD9-213ENST00000564845 FGFR1P11362 822 aa3.46□□□□□ -1.86
CHD9-213ENST00000564845 CTNNA1P35221 906 aaKnown RBP3.46□□□□□ -1.86
CHD9-213ENST00000564845 KCTD2Q14681 263 aa3.46□□□□□ -1.86
CHD9-213ENST00000564845 KYNUQ16719 465 aa3.46□□□□□ -1.86
CHD9-213ENST00000564845 FAM133BQ5BKY9 247 aaKnown RBP3.46□□□□□ -1.86
CHD9-213ENST00000564845 CIR1Q86X95 450 aaPredicted RBP3.46□□□□□ -1.86
CHD9-213ENST00000564845 GPC2Q8N158 579 aa3.46□□□□□ -1.86
CHD9-213ENST00000564845 MKNK1Q9BUB5 465 aa3.46□□□□□ -1.86
CHD9-213ENST00000564845 RASSF9O75901 435 aa3.46□□□□□ -1.86
CHD9-213ENST00000564845 CD4P01730 458 aa3.46□□□□□ -1.86
CHD9-213ENST00000564845 KRT15P19012 456 aa3.46□□□□□ -1.86
CHD9-213ENST00000564845 RGS2P41220 211 aa3.46□□□□□ -1.86
CHD9-213ENST00000564845 ACADSBP45954 432 aa3.46□□□□□ -1.86
CHD9-213ENST00000564845 RPL21P46778 160 aaKnown RBP3.46□□□□□ -1.86
CHD9-213ENST00000564845 PAPOLAP51003 745 aaKnown RBP3.46□□□□□ -1.86
CHD9-213ENST00000564845 RPS6KA3P51812 740 aa3.46□□□□□ -1.86
CHD9-213ENST00000564845 COPZ1P61923 177 aa3.46□□□□□ -1.86
CHD9-213ENST00000564845 RTL10Q7L3V2 364 aa3.46□□□□□ -1.86
CHD9-213ENST00000564845 C3orf58Q8NDZ4 430 aa3.46□□□□□ -1.86
CHD9-213ENST00000564845 FAM13CQ8NE31 585 aa3.46□□□□□ -1.86
CHD9-213ENST00000564845 TMEM174Q8WUU8 243 aa3.46□□□□□ -1.86
CHD9-213ENST00000564845 PIK3R5Q8WYR1 880 aa3.46□□□□□ -1.86
CHD9-213ENST00000564845 SEC14L1Q92503 715 aa3.46□□□□□ -1.86
CHD9-213ENST00000564845 MAGOHBQ96A72 148 aaKnown RBP3.46□□□□□ -1.86
CHD9-213ENST00000564845 KCNK9Q9NPC2 374 aa3.46□□□□□ -1.86
CHD9-213ENST00000564845 MAFFQ9ULX9 164 aa3.46□□□□□ -1.86
CHD9-213ENST00000564845 MCF2LO15068 1137 aa3.46□□□□□ -1.86
CHD9-213ENST00000564845 CRCPO75575 148 aa3.46□□□□□ -1.86
CHD9-213ENST00000564845 PRKCGP05129 697 aa3.46□□□□□ -1.86
CHD9-213ENST00000564845 MAPK1P28482 360 aa3.46□□□□□ -1.86
CHD9-213ENST00000564845 PRKCZQ05513 592 aa3.46□□□□□ -1.86
CHD9-213ENST00000564845 PPP1R26Q5T8A7 1209 aaPredicted RBP3.46□□□□□ -1.86
CHD9-213ENST00000564845 SPOCD1Q6ZMY3 1216 aa3.46□□□□□ -1.86
CHD9-213ENST00000564845 THEM5Q8N1Q8 247 aa3.46□□□□□ -1.86
CHD9-213ENST00000564845 AGBL3Q8NEM8 1001 aa3.46□□□□□ -1.86
CHD9-213ENST00000564845 KAT2BQ92831 832 aa3.46□□□□□ -1.86
CHD9-213ENST00000564845 CASP10Q92851 521 aa3.46□□□□□ -1.86
CHD9-213ENST00000564845 CCDC177Q9NQR7 707 aaPredicted RBP3.46□□□□□ -1.86
CHD9-213ENST00000564845 MYO16Q9Y6X6 1858 aa3.46□□□□□ -1.86
CHD9-213ENST00000564845 RASA4BC9J798 803 aa3.46□□□□□ -1.86
CHD9-213ENST00000564845 MAGEB2O15479 319 aa3.46□□□□□ -1.86
CHD9-213ENST00000564845 MAPK4P31152 587 aa3.46□□□□□ -1.86
CHD9-213ENST00000564845 CCL23P55773 120 aa3.46□□□□□ -1.86
CHD9-213ENST00000564845 ABCE1P61221 599 aaKnown RBP3.46□□□□□ -1.86
CHD9-213ENST00000564845 TGFB2P61812 414 aa3.46□□□□□ -1.86
CHD9-213ENST00000564845 TXNL4AP83876 142 aaKnown RBP3.46□□□□□ -1.86
CHD9-213ENST00000564845 MYBPC2Q14324 1141 aa3.46□□□□□ -1.86
CHD9-213ENST00000564845 KLHL38Q2WGJ6 581 aa3.46□□□□□ -1.86
CHD9-213ENST00000564845 GET4Q7L5D6 327 aaPredicted RBP3.46□□□□□ -1.86
CHD9-213ENST00000564845 SPATA21Q7Z572 469 aa3.46□□□□□ -1.86
CHD9-213ENST00000564845 CPLX4Q7Z7G2 160 aa3.46□□□□□ -1.86
CHD9-213ENST00000564845 EPS8L1Q8TE68 723 aa3.46□□□□□ -1.86
CHD9-213ENST00000564845 TSEN34Q9BSV6 310 aaKnown RBP3.46□□□□□ -1.86
CHD9-213ENST00000564845 VPS51Q9UID3 782 aa3.46□□□□□ -1.86
CHD9-213ENST00000564845 LRRC37A2A6NM11 1700 aa3.46□□□□□ -1.86
CHD9-213ENST00000564845 IL9RQ01113 521 aa3.46□□□□□ -1.86
CHD9-213ENST00000564845 CCDC137Q6PK04 289 aaKnown RBP3.46□□□□□ -1.86
CHD9-213ENST00000564845 MAMDC4Q6UXC1 1216 aa3.46□□□□□ -1.86
CHD9-213ENST00000564845 ZCCHC23Q6ZST2 131 aa3.46□□□□□ -1.86
CHD9-213ENST00000564845 NT5DC3Q86UY8 548 aa3.46□□□□□ -1.86
CHD9-213ENST00000564845 ZNF354CQ86Y25 554 aa3.46□□□□□ -1.86
CHD9-213ENST00000564845 ULK2Q8IYT8 1036 aa3.46□□□□□ -1.86
CHD9-213ENST00000564845 OR6B3Q8NGW1 331 aa3.46□□□□□ -1.86
CHD9-213ENST00000564845 FAM71BQ8TC56 605 aa3.46□□□□□ -1.86
CHD9-213ENST00000564845 SYN2Q92777 582 aaPredicted RBP3.46□□□□□ -1.86
CHD9-213ENST00000564845 ERGIC2Q96RQ1 377 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms