RNA–Protein interactions for RNA: ENST00000563909.5

RNF40-205, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-205ENST00000563909 CCSER2Q9H7U1 834 aa16.8■□□□□ 0.28
RNF40-205ENST00000563909 OSGEPQ9NPF4 335 aa16.8■□□□□ 0.28
RNF40-205ENST00000563909 IGSF5Q9NSI5 407 aa16.8■□□□□ 0.28
RNF40-205ENST00000563909 NXF1Q9UBU9 619 aaKnown RBP16.8■□□□□ 0.28
RNF40-205ENST00000563909 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.8■□□□□ 0.28
RNF40-205ENST00000563909 DFNA5O60443 496 aa16.79■□□□□ 0.28
RNF40-205ENST00000563909 YWHAQP27348 245 aa16.79■□□□□ 0.28
RNF40-205ENST00000563909 CTSKP43235 329 aa16.79■□□□□ 0.28
RNF40-205ENST00000563909 ACADVLP49748 655 aa16.79■□□□□ 0.28
RNF40-205ENST00000563909 ZNF132P52740 706 aa16.79■□□□□ 0.28
RNF40-205ENST00000563909 CACNA2D1P54289 1103 aa16.79■□□□□ 0.28
RNF40-205ENST00000563909 ASIC1P78348 528 aa16.79■□□□□ 0.28
RNF40-205ENST00000563909 RBP5P82980 135 aa16.79■□□□□ 0.28
RNF40-205ENST00000563909 ORC1Q13415 861 aa16.79■□□□□ 0.28
RNF40-205ENST00000563909 MDH1BQ5I0G3 518 aa16.79■□□□□ 0.28
RNF40-205ENST00000563909 PRAMEF14Q5SWL7 426 aa16.79■□□□□ 0.28
RNF40-205ENST00000563909 HS2ST1Q7LGA3 356 aa16.79■□□□□ 0.28
RNF40-205ENST00000563909 PDZD8Q8NEN9 1154 aa16.79■□□□□ 0.28
RNF40-205ENST00000563909 CXorf38Q8TB03 319 aa16.79■□□□□ 0.28
RNF40-205ENST00000563909 TTC9Q92623 222 aa16.79■□□□□ 0.28
RNF40-205ENST00000563909 NACA2Q9H009 215 aa16.79■□□□□ 0.28
RNF40-205ENST00000563909 IKZF4Q9H2S9 585 aa16.79■□□□□ 0.28
RNF40-205ENST00000563909 ST6GALNAC4Q9H4F1 302 aa16.79■□□□□ 0.28
RNF40-205ENST00000563909 LMBRD1Q9NUN5 540 aa16.79■□□□□ 0.28
RNF40-205ENST00000563909 PANK4Q9NVE7 773 aa16.79■□□□□ 0.28
RNF40-205ENST00000563909 SEL1LQ9UBV2 794 aa16.79■□□□□ 0.28
RNF40-205ENST00000563909 HOOK1Q9UJC3 728 aaKnown RBP16.79■□□□□ 0.28
RNF40-205ENST00000563909 ITGA11Q9UKX5 1188 aa16.79■□□□□ 0.28
RNF40-205ENST00000563909 PVALEFA0A1B0GWK0 134 aa16.78■□□□□ 0.28
RNF40-205ENST00000563909 FRMD3A2A2Y4 597 aa16.78■□□□□ 0.28
RNF40-205ENST00000563909 PAPSS1O43252 624 aaPredicted RBP16.78■□□□□ 0.28
RNF40-205ENST00000563909 ADSSP30520 456 aa16.78■□□□□ 0.28
RNF40-205ENST00000563909 POSTNQ15063 836 aa16.78■□□□□ 0.28
RNF40-205ENST00000563909 UNC13DQ70J99 1090 aa16.78■□□□□ 0.28
RNF40-205ENST00000563909 DPH6Q7L8W6 267 aa16.78■□□□□ 0.28
RNF40-205ENST00000563909 ADAT2Q7Z6V5 191 aaKnown RBP16.78■□□□□ 0.28
RNF40-205ENST00000563909 ELOA2Q8IYF1 753 aaPredicted RBP16.78■□□□□ 0.28
RNF40-205ENST00000563909 GRAMD1CQ8IYS0 662 aa16.78■□□□□ 0.28
RNF40-205ENST00000563909 BHMTQ93088 406 aa16.78■□□□□ 0.28
RNF40-205ENST00000563909 FBXO32Q969P5 355 aa16.78■□□□□ 0.28
RNF40-205ENST00000563909 FAM213AQ9BRX8 229 aa16.78■□□□□ 0.28
RNF40-205ENST00000563909 TRIM4Q9C037 500 aa16.78■□□□□ 0.28
RNF40-205ENST00000563909 BLZF1Q9H2G9 400 aa16.78■□□□□ 0.28
RNF40-205ENST00000563909 TMEM30AQ9NV96 361 aa16.78■□□□□ 0.28
RNF40-205ENST00000563909 MARK1Q9P0L2 795 aa16.78■□□□□ 0.28
RNF40-205ENST00000563909 MYO9AB2RTY4 2548 aa16.78■□□□□ 0.28
RNF40-205ENST00000563909 MYLKQ15746 1914 aa16.78■□□□□ 0.28
RNF40-205ENST00000563909 A0A1B0GTQ1 180 aa16.77■□□□□ 0.28
RNF40-205ENST00000563909 ITGAVP06756 1048 aa16.77■□□□□ 0.28
RNF40-205ENST00000563909 GLDCP23378 1020 aa16.77■□□□□ 0.28
RNF40-205ENST00000563909 ACSL1P33121 698 aa16.77■□□□□ 0.28
RNF40-205ENST00000563909 COPAP53621 1224 aa16.77■□□□□ 0.28
RNF40-205ENST00000563909 PCBP4P57723 403 aaKnown RBP16.77■□□□□ 0.28
RNF40-205ENST00000563909 CUL4BQ13620 913 aa16.77■□□□□ 0.28
RNF40-205ENST00000563909 HTR3DQ70Z44 454 aa16.77■□□□□ 0.28
RNF40-205ENST00000563909 ZNF720Q7Z2F6 126 aa16.77■□□□□ 0.28
RNF40-205ENST00000563909 SFR1Q86XK3 245 aa16.77■□□□□ 0.28
RNF40-205ENST00000563909 NUP93Q8N1F7 819 aa16.77■□□□□ 0.28
RNF40-205ENST00000563909 EID2Q8N6I1 236 aa16.77■□□□□ 0.28
RNF40-205ENST00000563909 OVCA2Q8WZ82 227 aa16.77■□□□□ 0.28
RNF40-205ENST00000563909 SIX4Q9UIU6 781 aa16.77■□□□□ 0.28
RNF40-205ENST00000563909 PTPRJQ12913 1337 aa16.76■□□□□ 0.27
RNF40-205ENST00000563909 GREM1O60565 184 aa16.76■□□□□ 0.27
RNF40-205ENST00000563909 FSBPO95073 299 aa16.76■□□□□ 0.27
RNF40-205ENST00000563909 ABCB4P21439 1286 aa16.76■□□□□ 0.27
RNF40-205ENST00000563909 CD27P26842 260 aa16.76■□□□□ 0.27
RNF40-205ENST00000563909 CDH8P55286 799 aa16.76■□□□□ 0.27
RNF40-205ENST00000563909 C21orf59P57076 290 aa16.76■□□□□ 0.27
RNF40-205ENST00000563909 ENPP2Q13822 863 aa16.76■□□□□ 0.27
RNF40-205ENST00000563909 LIMS2Q7Z4I7 341 aa16.76■□□□□ 0.27
RNF40-205ENST00000563909 TSC1Q92574 1164 aa16.76■□□□□ 0.27
RNF40-205ENST00000563909 CCDC47Q96A33 483 aaKnown RBP16.76■□□□□ 0.27
RNF40-205ENST00000563909 BIRC7Q96CA5 298 aa16.76■□□□□ 0.27
RNF40-205ENST00000563909 HVCN1Q96D96 273 aa16.76■□□□□ 0.27
RNF40-205ENST00000563909 OLFML3Q9NRN5 406 aa16.76■□□□□ 0.27
RNF40-205ENST00000563909 PLK2Q9NYY3 685 aa16.76■□□□□ 0.27
RNF40-205ENST00000563909 THAP10Q9P2Z0 257 aaPredicted RBP16.76■□□□□ 0.27
RNF40-205ENST00000563909 CLCA2Q9UQC9 943 aa16.76■□□□□ 0.27
RNF40-205ENST00000563909 R3HCC1Q9Y3T6 440 aaKnown RBP16.76■□□□□ 0.27
RNF40-205ENST00000563909 NPC1O15118 1278 aa16.75■□□□□ 0.27
RNF40-205ENST00000563909 RTN3O95197 1032 aaPredicted RBP16.75■□□□□ 0.27
RNF40-205ENST00000563909 ACO1P21399 889 aaKnown RBP16.75■□□□□ 0.27
RNF40-205ENST00000563909 CASP1P29466 404 aa16.75■□□□□ 0.27
RNF40-205ENST00000563909 TUBP50607 506 aa16.75■□□□□ 0.27
RNF40-205ENST00000563909 VAC14Q08AM6 782 aa16.75■□□□□ 0.27
RNF40-205ENST00000563909 SNX30Q5VWJ9 437 aa16.75■□□□□ 0.27
RNF40-205ENST00000563909 BRSK2Q8IWQ3 736 aa16.75■□□□□ 0.27
RNF40-205ENST00000563909 ZSWIM2Q8NEG5 633 aa16.75■□□□□ 0.27
RNF40-205ENST00000563909 SCAMP5Q8TAC9 235 aa16.75■□□□□ 0.27
RNF40-205ENST00000563909 HPDLQ96IR7 371 aa16.75■□□□□ 0.27
RNF40-205ENST00000563909 ZNF518BQ9C0D4 1074 aa16.75■□□□□ 0.27
RNF40-205ENST00000563909 MRPL44Q9H9J2 332 aaKnown RBP16.75■□□□□ 0.27
RNF40-205ENST00000563909 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.75■□□□□ 0.27
RNF40-205ENST00000563909 HEMK1Q9Y5R4 338 aaPredicted RBP16.75■□□□□ 0.27
RNF40-205ENST00000563909 TSPAN3O60637 253 aa16.74■□□□□ 0.27
RNF40-205ENST00000563909 PPP1R37O75864 691 aa16.74■□□□□ 0.27
RNF40-205ENST00000563909 RPN1P04843 607 aaKnown RBP16.74■□□□□ 0.27
RNF40-205ENST00000563909 PRR29P0C7W0 189 aa16.74■□□□□ 0.27
RNF40-205ENST00000563909 WARSP23381 471 aaKnown RBP16.74■□□□□ 0.27
RNF40-205ENST00000563909 GNL1P36915 607 aaPredicted RBP16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms