RNA–Protein interactions for RNA: ENST00000563854.1

NME3-205, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-205ENST00000563854 STPG1Q5TH74 334 aa18.48■□□□□ 0.55
NME3-205ENST00000563854 RNF43Q68DV7 783 aa18.48■□□□□ 0.55
NME3-205ENST00000563854 PMF1Q6P1K2 205 aa18.48■□□□□ 0.55
NME3-205ENST00000563854 FOXR2Q6PJQ5 311 aa18.48■□□□□ 0.55
NME3-205ENST00000563854 TRIML1Q8N9V2 468 aa18.48■□□□□ 0.55
NME3-205ENST00000563854 KCTD13Q8WZ19 329 aa18.48■□□□□ 0.55
NME3-205ENST00000563854 MIS12Q9H081 205 aa18.48■□□□□ 0.55
NME3-205ENST00000563854 CNGB3Q9NQW8 809 aa18.48■□□□□ 0.55
NME3-205ENST00000563854 ABCC13Q9NSE7 274 aa18.48■□□□□ 0.55
NME3-205ENST00000563854 KIAA1468Q9P260 1216 aa18.48■□□□□ 0.55
NME3-205ENST00000563854 MBD1Q9UIS9 605 aaPredicted RBP18.48■□□□□ 0.55
NME3-205ENST00000563854 THADAQ6YHU6 1953 aa18.48■□□□□ 0.55
NME3-205ENST00000563854 ATXN2Q99700 1313 aaKnown RBP18.48■□□□□ 0.55
NME3-205ENST00000563854 A0A1W2PQF6 199 aa18.47■□□□□ 0.55
NME3-205ENST00000563854 MFAP3P55082 362 aa18.47■□□□□ 0.55
NME3-205ENST00000563854 GCNT1Q02742 428 aa18.47■□□□□ 0.55
NME3-205ENST00000563854 BYSLQ13895 437 aaKnown RBP18.47■□□□□ 0.55
NME3-205ENST00000563854 STILQ15468 1287 aa18.47■□□□□ 0.55
NME3-205ENST00000563854 CNGA2Q16280 664 aa18.47■□□□□ 0.55
NME3-205ENST00000563854 GEN1Q17RS7 908 aa18.47■□□□□ 0.55
NME3-205ENST00000563854 MAP7D1Q3KQU3 841 aa18.47■□□□□ 0.55
NME3-205ENST00000563854 KIAA1211LQ6NV74 962 aa18.47■□□□□ 0.55
NME3-205ENST00000563854 DEFB119Q8N690 84 aa18.47■□□□□ 0.55
NME3-205ENST00000563854 IPO4Q8TEX9 1081 aaKnown RBP18.47■□□□□ 0.55
NME3-205ENST00000563854 CLEC4CQ8WTT0 213 aa18.47■□□□□ 0.55
NME3-205ENST00000563854 GOLGA1Q92805 767 aa18.47■□□□□ 0.55
NME3-205ENST00000563854 KREMEN1Q96MU8 473 aa18.47■□□□□ 0.55
NME3-205ENST00000563854 SLC6A17Q9H1V8 727 aa18.47■□□□□ 0.55
NME3-205ENST00000563854 CHMP5Q9NZZ3 219 aa18.47■□□□□ 0.55
NME3-205ENST00000563854 PATE3B3GLJ2 98 aa18.46■□□□□ 0.55
NME3-205ENST00000563854 WASH3PC4AMC7 463 aa18.46■□□□□ 0.55
NME3-205ENST00000563854 NDUFV2P19404 249 aa18.46■□□□□ 0.55
NME3-205ENST00000563854 PTGER3P43115 390 aa18.46■□□□□ 0.55
NME3-205ENST00000563854 MARSP56192 900 aaKnown RBP18.46■□□□□ 0.55
NME3-205ENST00000563854 TRIP4Q15650 581 aaPredicted RBP18.46■□□□□ 0.55
NME3-205ENST00000563854 KIAA1324Q6UXG2 1013 aaKnown RBP18.46■□□□□ 0.55
NME3-205ENST00000563854 ANKS1BQ7Z6G8 1248 aa18.46■□□□□ 0.55
NME3-205ENST00000563854 CPXM2Q8N436 756 aa18.46■□□□□ 0.55
NME3-205ENST00000563854 SLC35F5Q8WV83 523 aa18.46■□□□□ 0.55
NME3-205ENST00000563854 CRACR2AQ9BSW2 395 aa18.46■□□□□ 0.55
NME3-205ENST00000563854 CIPCQ9C0C6 399 aa18.46■□□□□ 0.55
NME3-205ENST00000563854 UBE2TQ9NPD8 197 aaPredicted RBP18.46■□□□□ 0.55
NME3-205ENST00000563854 ST7Q9NRC1 585 aa18.46■□□□□ 0.55
NME3-205ENST00000563854 RWDD2AQ9UIY3 292 aa18.46■□□□□ 0.55
NME3-205ENST00000563854 HBS1LQ9Y450 684 aaKnown RBP18.46■□□□□ 0.55
NME3-205ENST00000563854 STON1Q9Y6Q2 735 aa18.46■□□□□ 0.55
NME3-205ENST00000563854 ABCA7Q8IZY2 2146 aa18.46■□□□□ 0.55
NME3-205ENST00000563854 KHNYNO15037 678 aaKnown RBP18.45■□□□□ 0.54
NME3-205ENST00000563854 GABBR2O75899 941 aa18.45■□□□□ 0.54
NME3-205ENST00000563854 LTFP02788 710 aa18.45■□□□□ 0.54
NME3-205ENST00000563854 ZNF132P52740 706 aa18.45■□□□□ 0.54
NME3-205ENST00000563854 LIMK1P53667 647 aa18.45■□□□□ 0.54
NME3-205ENST00000563854 RPL6Q02878 288 aaKnown RBP18.45■□□□□ 0.54
NME3-205ENST00000563854 LYSMD4Q5XG99 296 aa18.45■□□□□ 0.54
NME3-205ENST00000563854 UCMAQ8WVF2 138 aa18.45■□□□□ 0.54
NME3-205ENST00000563854 GABRG3Q99928 467 aa18.45■□□□□ 0.54
NME3-205ENST00000563854 FBXO10Q9UK96 956 aa18.45■□□□□ 0.54
NME3-205ENST00000563854 CLEC4EQ9ULY5 219 aa18.45■□□□□ 0.54
NME3-205ENST00000563854 CYP8B1Q9UNU6 501 aa18.45■□□□□ 0.54
NME3-205ENST00000563854 SLC27A6Q9Y2P4 619 aa18.45■□□□□ 0.54
NME3-205ENST00000563854 MYO18AQ92614 2054 aaKnown RBP18.45■□□□□ 0.54
NME3-205ENST00000563854 LNP1A1A4G5 178 aa18.44■□□□□ 0.54
NME3-205ENST00000563854 LETM1O95202 739 aaPredicted RBP18.44■□□□□ 0.54
NME3-205ENST00000563854 USP8P40818 1118 aa18.44■□□□□ 0.54
NME3-205ENST00000563854 ARID5AQ03989 594 aa18.44■□□□□ 0.54
NME3-205ENST00000563854 STARD3Q14849 445 aa18.44■□□□□ 0.54
NME3-205ENST00000563854 TPD52L1Q16890 204 aaPredicted RBP18.44■□□□□ 0.54
NME3-205ENST00000563854 MPPE1Q53F39 396 aa18.44■□□□□ 0.54
NME3-205ENST00000563854 DENND1BQ6P3S1 775 aa18.44■□□□□ 0.54
NME3-205ENST00000563854 GJB7Q6PEY0 223 aa18.44■□□□□ 0.54
NME3-205ENST00000563854 SORCS1Q8WY21 1168 aa18.44■□□□□ 0.54
NME3-205ENST00000563854 IRGQQ8WZA9 623 aa18.44■□□□□ 0.54
NME3-205ENST00000563854 DDX1Q92499 740 aaKnown RBP18.44■□□□□ 0.54
NME3-205ENST00000563854 FAM149B1Q96BN6 582 aa18.44■□□□□ 0.54
NME3-205ENST00000563854 NUP205Q92621 2012 aa18.44■□□□□ 0.54
NME3-205ENST00000563854 NCOR2Q9Y618 2525 aa18.43■□□□□ 0.54
NME3-205ENST00000563854 C4orf47A7E2U8 309 aa18.43■□□□□ 0.54
NME3-205ENST00000563854 AP5Z1O43299 807 aa18.43■□□□□ 0.54
NME3-205ENST00000563854 THAP12O43422 761 aa18.43■□□□□ 0.54
NME3-205ENST00000563854 FBXO21O94952 628 aa18.43■□□□□ 0.54
NME3-205ENST00000563854 IL12RB1P42701 662 aa18.43■□□□□ 0.54
NME3-205ENST00000563854 MTIF2P46199 727 aaKnown RBP18.43■□□□□ 0.54
NME3-205ENST00000563854 ARHGAP44Q17R89 818 aa18.43■□□□□ 0.54
NME3-205ENST00000563854 MSANTD2Q6P1R3 559 aa18.43■□□□□ 0.54
NME3-205ENST00000563854 SLC36A4Q6YBV0 504 aa18.43■□□□□ 0.54
NME3-205ENST00000563854 CACUL1Q86Y37 369 aa18.43■□□□□ 0.54
NME3-205ENST00000563854 FAM217AQ8IXS0 508 aa18.43■□□□□ 0.54
NME3-205ENST00000563854 SCML4Q8N228 414 aa18.43■□□□□ 0.54
NME3-205ENST00000563854 HSFY1Q96LI6 401 aa18.43■□□□□ 0.54
NME3-205ENST00000563854 CD93Q9NPY3 652 aa18.43■□□□□ 0.54
NME3-205ENST00000563854 IGHV1OR15-9A0A0B4J2B8 117 aa18.42■□□□□ 0.54
NME3-205ENST00000563854 GFRA2O00451 464 aa18.42■□□□□ 0.54
NME3-205ENST00000563854 MED7O43513 233 aa18.42■□□□□ 0.54
NME3-205ENST00000563854 SYNCRIPO60506 623 aaKnown RBP18.42■□□□□ 0.54
NME3-205ENST00000563854 ZNF217O75362 1048 aa18.42■□□□□ 0.54
NME3-205ENST00000563854 CFIP05156 583 aa18.42■□□□□ 0.54
NME3-205ENST00000563854 NCAM1P13591 858 aa18.42■□□□□ 0.54
NME3-205ENST00000563854 ITPKAP23677 461 aa18.42■□□□□ 0.54
NME3-205ENST00000563854 HOXD9P28356 352 aaPredicted RBP18.42■□□□□ 0.54
NME3-205ENST00000563854 GNA15P30679 374 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms