RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 JPH3Q8WXH2 748 aaPredicted RBP11.35□□□□□ -0.59
HDGFL3-204ENST00000563790 NKD1Q969G9 470 aa11.35□□□□□ -0.59
HDGFL3-204ENST00000563790 EVI5LQ96CN4 794 aa11.35□□□□□ -0.59
HDGFL3-204ENST00000563790 SLC45A3Q96JT2 553 aa11.35□□□□□ -0.59
HDGFL3-204ENST00000563790 DRC1Q96MC2 740 aa11.35□□□□□ -0.59
HDGFL3-204ENST00000563790 STRADBQ9C0K7 418 aa11.35□□□□□ -0.59
HDGFL3-204ENST00000563790 LRWD1Q9UFC0 647 aa11.35□□□□□ -0.59
HDGFL3-204ENST00000563790 TUBGCP4Q9UGJ1 667 aa11.35□□□□□ -0.59
HDGFL3-204ENST00000563790 PCDHB5Q9Y5E4 795 aa11.35□□□□□ -0.59
HDGFL3-204ENST00000563790 EME2A4GXA9 379 aaPredicted RBP11.34□□□□□ -0.59
HDGFL3-204ENST00000563790 C9orf172C9J069 976 aa11.34□□□□□ -0.59
HDGFL3-204ENST00000563790 STMND1H3BQB6 276 aa11.34□□□□□ -0.59
HDGFL3-204ENST00000563790 EML1O00423 815 aa11.34□□□□□ -0.59
HDGFL3-204ENST00000563790 CASC3O15234 703 aaKnown RBP11.34□□□□□ -0.59
HDGFL3-204ENST00000563790 NKX2-8O15522 239 aa11.34□□□□□ -0.59
HDGFL3-204ENST00000563790 ATMINO43313 823 aaPredicted RBP11.34□□□□□ -0.59
HDGFL3-204ENST00000563790 EDIL3O43854 480 aa11.34□□□□□ -0.59
HDGFL3-204ENST00000563790 MAGEC1O60732 1142 aa11.34□□□□□ -0.59
HDGFL3-204ENST00000563790 PRPF40AO75400 957 aaKnown RBP11.34□□□□□ -0.59
HDGFL3-204ENST00000563790 CYP11A1P05108 521 aa11.34□□□□□ -0.59
HDGFL3-204ENST00000563790 CISD3P0C7P0 127 aa11.34□□□□□ -0.59
HDGFL3-204ENST00000563790 VARSP26640 1264 aaKnown RBP11.34□□□□□ -0.59
HDGFL3-204ENST00000563790 LRPAP1P30533 357 aa11.34□□□□□ -0.59
HDGFL3-204ENST00000563790 DGKGP49619 791 aa11.34□□□□□ -0.59
HDGFL3-204ENST00000563790 CDH8P55286 799 aa11.34□□□□□ -0.59
HDGFL3-204ENST00000563790 PER3P56645 1201 aa11.34□□□□□ -0.59
HDGFL3-204ENST00000563790 OVGP1Q12889 678 aa11.34□□□□□ -0.59
HDGFL3-204ENST00000563790 CAMK2GQ13555 558 aaPredicted RBP11.34□□□□□ -0.59
HDGFL3-204ENST00000563790 FGL2Q14314 439 aa11.34□□□□□ -0.59
HDGFL3-204ENST00000563790 CDKN3Q16667 212 aa11.34□□□□□ -0.59
HDGFL3-204ENST00000563790 DDR2Q16832 855 aa11.34□□□□□ -0.59
HDGFL3-204ENST00000563790 DEFB109BQ30KR1 87 aa11.34□□□□□ -0.59
HDGFL3-204ENST00000563790 APBB1IPQ7Z5R6 666 aaPredicted RBP11.34□□□□□ -0.59
HDGFL3-204ENST00000563790 EXOC6Q8TAG9 804 aa11.34□□□□□ -0.59
HDGFL3-204ENST00000563790 SERAC1Q96JX3 654 aa11.34□□□□□ -0.59
HDGFL3-204ENST00000563790 DUSP23Q9BVJ7 150 aa11.34□□□□□ -0.59
HDGFL3-204ENST00000563790 MFRPQ9BY79 579 aa11.34□□□□□ -0.59
HDGFL3-204ENST00000563790 CCDC113Q9H0I3 377 aa11.34□□□□□ -0.59
HDGFL3-204ENST00000563790 DCTPP1Q9H773 170 aa11.34□□□□□ -0.59
HDGFL3-204ENST00000563790 NCKIPSDQ9NZQ3 722 aa11.34□□□□□ -0.59
HDGFL3-204ENST00000563790 CPED1A4D0V7 1026 aa11.33□□□□□ -0.6
HDGFL3-204ENST00000563790 NTN3O00634 580 aaPredicted RBP11.33□□□□□ -0.6
HDGFL3-204ENST00000563790 DGAT1O75907 488 aa11.33□□□□□ -0.6
HDGFL3-204ENST00000563790 MS4A1P11836 297 aa11.33□□□□□ -0.6
HDGFL3-204ENST00000563790 TYRP14679 529 aa11.33□□□□□ -0.6
HDGFL3-204ENST00000563790 COX6B1P14854 86 aa11.33□□□□□ -0.6
HDGFL3-204ENST00000563790 ITIH1P19827 911 aa11.33□□□□□ -0.6
HDGFL3-204ENST00000563790 PRKCHP24723 683 aa11.33□□□□□ -0.6
HDGFL3-204ENST00000563790 OAS2P29728 719 aaKnown RBP11.33□□□□□ -0.6
HDGFL3-204ENST00000563790 GALCP54803 685 aa11.33□□□□□ -0.6
HDGFL3-204ENST00000563790 PPP2R2AP63151 447 aa11.33□□□□□ -0.6
HDGFL3-204ENST00000563790 NR6A1Q15406 480 aa11.33□□□□□ -0.6
HDGFL3-204ENST00000563790 CEP135Q66GS9 1140 aa11.33□□□□□ -0.6
HDGFL3-204ENST00000563790 CRTC1Q6UUV9 634 aa11.33□□□□□ -0.6
HDGFL3-204ENST00000563790 ARSGQ96EG1 525 aa11.33□□□□□ -0.6
HDGFL3-204ENST00000563790 CCDC136Q96JN2 1154 aa11.33□□□□□ -0.6
HDGFL3-204ENST00000563790 B3GNT4Q9C0J1 378 aa11.33□□□□□ -0.6
HDGFL3-204ENST00000563790 CDH19Q9H159 772 aa11.33□□□□□ -0.6
HDGFL3-204ENST00000563790 POLR3FQ9H1D9 316 aaPredicted RBP11.33□□□□□ -0.6
HDGFL3-204ENST00000563790 RRN3Q9NYV6 651 aa11.33□□□□□ -0.6
HDGFL3-204ENST00000563790 PCDHB13Q9Y5F0 798 aa11.33□□□□□ -0.6
HDGFL3-204ENST00000563790 PCDHA5Q9Y5H7 936 aa11.33□□□□□ -0.6
HDGFL3-204ENST00000563790 KLF2Q9Y5W3 355 aaPredicted RBP11.33□□□□□ -0.6
HDGFL3-204ENST00000563790 SNX14Q9Y5W7 946 aa11.33□□□□□ -0.6
HDGFL3-204ENST00000563790 FAM47DPA6NHR8 397 aa11.32□□□□□ -0.6
HDGFL3-204ENST00000563790 NEDD8-MDP1E9PL57 170 aa11.32□□□□□ -0.6
HDGFL3-204ENST00000563790 hCG_1984214I3L0E3 225 aa11.32□□□□□ -0.6
HDGFL3-204ENST00000563790 K7ESM1 405 aa11.32□□□□□ -0.6
HDGFL3-204ENST00000563790 HIP1O00291 1037 aa11.32□□□□□ -0.6
HDGFL3-204ENST00000563790 ZBTB39O15060 712 aa11.32□□□□□ -0.6
HDGFL3-204ENST00000563790 DUX1O43812 170 aa11.32□□□□□ -0.6
HDGFL3-204ENST00000563790 PIAS2O75928 621 aa11.32□□□□□ -0.6
HDGFL3-204ENST00000563790 EPHX1P07099 455 aa11.32□□□□□ -0.6
HDGFL3-204ENST00000563790 SNRPB2P08579 225 aaKnown RBP11.32□□□□□ -0.6
HDGFL3-204ENST00000563790 PRKAR1AP10644 381 aa11.32□□□□□ -0.6
HDGFL3-204ENST00000563790 CCR5P51681 352 aa11.32□□□□□ -0.6
HDGFL3-204ENST00000563790 ZNF234Q14588 700 aa11.32□□□□□ -0.6
HDGFL3-204ENST00000563790 TTC31Q49AM3 519 aaPredicted RBP11.32□□□□□ -0.6
HDGFL3-204ENST00000563790 NCEH1Q6PIU2 408 aa11.32□□□□□ -0.6
HDGFL3-204ENST00000563790 TMTC3Q6ZXV5 915 aa11.32□□□□□ -0.6
HDGFL3-204ENST00000563790 BBS7Q8IWZ6 715 aa11.32□□□□□ -0.6
HDGFL3-204ENST00000563790 NAGSQ8N159 534 aa11.32□□□□□ -0.6
HDGFL3-204ENST00000563790 TMEM130Q8N3G9 435 aa11.32□□□□□ -0.6
HDGFL3-204ENST00000563790 IL22RA1Q8N6P7 574 aa11.32□□□□□ -0.6
HDGFL3-204ENST00000563790 ZNF713Q8N859 430 aaPredicted RBP11.32□□□□□ -0.6
HDGFL3-204ENST00000563790 IGDCC4Q8TDY8 1250 aa11.32□□□□□ -0.6
HDGFL3-204ENST00000563790 NDRG1Q92597 394 aaKnown RBP11.32□□□□□ -0.6
HDGFL3-204ENST00000563790 USP7Q93009 1102 aa11.32□□□□□ -0.6
HDGFL3-204ENST00000563790 SENP8Q96LD8 212 aa11.32□□□□□ -0.6
HDGFL3-204ENST00000563790 NACC1Q96RE7 527 aa11.32□□□□□ -0.6
HDGFL3-204ENST00000563790 LXNQ9BS40 222 aa11.32□□□□□ -0.6
HDGFL3-204ENST00000563790 C2orf40Q9H1Z8 148 aa11.32□□□□□ -0.6
HDGFL3-204ENST00000563790 BARHL2Q9NY43 387 aa11.32□□□□□ -0.6
HDGFL3-204ENST00000563790 PTPRJQ12913 1337 aa11.32□□□□□ -0.6
HDGFL3-204ENST00000563790 NEMP2A6NFY4 417 aa11.31□□□□□ -0.6
HDGFL3-204ENST00000563790 SCAMP1O15126 338 aa11.31□□□□□ -0.6
HDGFL3-204ENST00000563790 OAS1P00973 400 aaKnown RBP11.31□□□□□ -0.6
HDGFL3-204ENST00000563790 DNTTP04053 509 aa11.31□□□□□ -0.6
HDGFL3-204ENST00000563790 PDGFAP04085 211 aa11.31□□□□□ -0.6
HDGFL3-204ENST00000563790 CCKBRP32239 447 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms