RNA–Protein interactions for RNA: ENST00000563667.5

PDXDC1-209, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 4

Gene PDXDC1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-209ENST00000563667 MSANTD2Q6P1R3 559 aa16.08■□□□□ 0.16
PDXDC1-209ENST00000563667 RTL10Q7L3V2 364 aa16.08■□□□□ 0.16
PDXDC1-209ENST00000563667 TADA2BQ86TJ2 420 aa16.08■□□□□ 0.16
PDXDC1-209ENST00000563667 HS6ST3Q8IZP7 471 aa16.08■□□□□ 0.16
PDXDC1-209ENST00000563667 CCDC185Q8N715 623 aa16.08■□□□□ 0.16
PDXDC1-209ENST00000563667 CEP112Q8N8E3 955 aa16.08■□□□□ 0.16
PDXDC1-209ENST00000563667 TEKT4Q8WW24 435 aa16.08■□□□□ 0.16
PDXDC1-209ENST00000563667 RAPGEF5Q92565 580 aa16.08■□□□□ 0.16
PDXDC1-209ENST00000563667 PGAP3Q96FM1 320 aaPredicted RBP16.08■□□□□ 0.16
PDXDC1-209ENST00000563667 SNRNP25Q9BV90 132 aaKnown RBP16.08■□□□□ 0.16
PDXDC1-209ENST00000563667 CCSER2Q9H7U1 834 aa16.08■□□□□ 0.16
PDXDC1-209ENST00000563667 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.08■□□□□ 0.16
PDXDC1-209ENST00000563667 DPP7Q9UHL4 492 aa16.08■□□□□ 0.16
PDXDC1-209ENST00000563667 PLXNA3P51805 1871 aa16.08■□□□□ 0.16
PDXDC1-209ENST00000563667 PGRMC1O00264 195 aaKnown RBP16.07■□□□□ 0.16
PDXDC1-209ENST00000563667 PDE2AO00408 941 aaPredicted RBP16.07■□□□□ 0.16
PDXDC1-209ENST00000563667 MSI1O43347 362 aaKnown RBP16.07■□□□□ 0.16
PDXDC1-209ENST00000563667 TLR5O60602 858 aa16.07■□□□□ 0.16
PDXDC1-209ENST00000563667 RFPL2O75678 378 aa16.07■□□□□ 0.16
PDXDC1-209ENST00000563667 TBX18O95935 607 aa16.07■□□□□ 0.16
PDXDC1-209ENST00000563667 FGGP02679 453 aa16.07■□□□□ 0.16
PDXDC1-209ENST00000563667 MYL4P12829 197 aa16.07■□□□□ 0.16
PDXDC1-209ENST00000563667 PPP3CCP48454 512 aa16.07■□□□□ 0.16
PDXDC1-209ENST00000563667 CDH6P55285 790 aa16.07■□□□□ 0.16
PDXDC1-209ENST00000563667 ARL13BQ3SXY8 428 aa16.07■□□□□ 0.16
PDXDC1-209ENST00000563667 PABPC1LQ4VXU2 614 aaKnown RBP16.07■□□□□ 0.16
PDXDC1-209ENST00000563667 ZC3H12AQ5D1E8 599 aaKnown RBP16.07■□□□□ 0.16
PDXDC1-209ENST00000563667 HECTD3Q5T447 861 aa16.07■□□□□ 0.16
PDXDC1-209ENST00000563667 SPOCD1Q6ZMY3 1216 aa16.07■□□□□ 0.16
PDXDC1-209ENST00000563667 BNIPLQ7Z465 357 aa16.07■□□□□ 0.16
PDXDC1-209ENST00000563667 ADAT2Q7Z6V5 191 aaKnown RBP16.07■□□□□ 0.16
PDXDC1-209ENST00000563667 MIB1Q86YT6 1006 aa16.07■□□□□ 0.16
PDXDC1-209ENST00000563667 RASGEF1CQ8N431 466 aa16.07■□□□□ 0.16
PDXDC1-209ENST00000563667 VN1R2Q8NFZ6 395 aa16.07■□□□□ 0.16
PDXDC1-209ENST00000563667 ACTRT1Q8TDG2 376 aa16.07■□□□□ 0.16
PDXDC1-209ENST00000563667 HDAC7Q8WUI4 952 aa16.07■□□□□ 0.16
PDXDC1-209ENST00000563667 MSLNLQ96KJ4 702 aa16.07■□□□□ 0.16
PDXDC1-209ENST00000563667 SERPINB11Q96P15 392 aa16.07■□□□□ 0.16
PDXDC1-209ENST00000563667 GCNAQ96QF7 691 aa16.07■□□□□ 0.16
PDXDC1-209ENST00000563667 CDK5RAP1Q96SZ6 601 aaKnown RBP16.07■□□□□ 0.16
PDXDC1-209ENST00000563667 CORO1BQ9BR76 489 aa16.07■□□□□ 0.16
PDXDC1-209ENST00000563667 CALN1Q9BXU9 219 aa16.07■□□□□ 0.16
PDXDC1-209ENST00000563667 DHX35Q9H5Z1 703 aaKnown RBP16.07■□□□□ 0.16
PDXDC1-209ENST00000563667 WDCPQ9H6R7 721 aa16.07■□□□□ 0.16
PDXDC1-209ENST00000563667 MARCH2Q9P0N8 246 aa16.07■□□□□ 0.16
PDXDC1-209ENST00000563667 HCFC2Q9Y5Z7 792 aa16.07■□□□□ 0.16
PDXDC1-209ENST00000563667 TRANK1O15050 2925 aa16.06■□□□□ 0.16
PDXDC1-209ENST00000563667 SLC12A8A0AV02 714 aa16.06■□□□□ 0.16
PDXDC1-209ENST00000563667 CTAGE15A4D2H0 777 aa16.06■□□□□ 0.16
PDXDC1-209ENST00000563667 IRAK2O43187 625 aa16.06■□□□□ 0.16
PDXDC1-209ENST00000563667 XYLBO75191 536 aa16.06■□□□□ 0.16
PDXDC1-209ENST00000563667 SLU7O95391 586 aaKnown RBP16.06■□□□□ 0.16
PDXDC1-209ENST00000563667 IGLV3-25P01717 112 aa16.06■□□□□ 0.16
PDXDC1-209ENST00000563667 HMBSP08397 361 aa16.06■□□□□ 0.16
PDXDC1-209ENST00000563667 CTAGE8P0CG41 777 aa16.06■□□□□ 0.16
PDXDC1-209ENST00000563667 KDELR1P24390 212 aa16.06■□□□□ 0.16
PDXDC1-209ENST00000563667 GABRR2P28476 465 aa16.06■□□□□ 0.16
PDXDC1-209ENST00000563667 CXCR3P49682 368 aa16.06■□□□□ 0.16
PDXDC1-209ENST00000563667 TBX4P57082 545 aa16.06■□□□□ 0.16
PDXDC1-209ENST00000563667 SMAD2Q15796 467 aaKnown RBP16.06■□□□□ 0.16
PDXDC1-209ENST00000563667 CA9Q16790 459 aa16.06■□□□□ 0.16
PDXDC1-209ENST00000563667 EFHC2Q5JST6 749 aa16.06■□□□□ 0.16
PDXDC1-209ENST00000563667 SNX30Q5VWJ9 437 aa16.06■□□□□ 0.16
PDXDC1-209ENST00000563667 MFSD7Q6UXD7 560 aa16.06■□□□□ 0.16
PDXDC1-209ENST00000563667 CYP4V2Q6ZWL3 525 aaPredicted RBP16.06■□□□□ 0.16
PDXDC1-209ENST00000563667 CTAGE6Q86UF2 777 aa16.06■□□□□ 0.16
PDXDC1-209ENST00000563667 MAP7D3Q8IWC1 876 aa16.06■□□□□ 0.16
PDXDC1-209ENST00000563667 CTAGE4Q8IX94 777 aa16.06■□□□□ 0.16
PDXDC1-209ENST00000563667 GJD3Q8N144 294 aa16.06■□□□□ 0.16
PDXDC1-209ENST00000563667 CMASQ8NFW8 434 aaPredicted RBP16.06■□□□□ 0.16
PDXDC1-209ENST00000563667 NAP1L3Q99457 506 aaPredicted RBP16.06■□□□□ 0.16
PDXDC1-209ENST00000563667 APOL5Q9BWW9 433 aa16.06■□□□□ 0.16
PDXDC1-209ENST00000563667 HEMGNQ9BXL5 484 aa16.06■□□□□ 0.16
PDXDC1-209ENST00000563667 OSBPL8Q9BZF1 889 aa16.06■□□□□ 0.16
PDXDC1-209ENST00000563667 TRPC7Q9HCX4 862 aa16.06■□□□□ 0.16
PDXDC1-209ENST00000563667 WDR6Q9NNW5 1121 aaKnown RBP16.06■□□□□ 0.16
PDXDC1-209ENST00000563667 ASAH2Q9NR71 780 aa16.06■□□□□ 0.16
PDXDC1-209ENST00000563667 FZD10Q9ULW2 581 aa16.06■□□□□ 0.16
PDXDC1-209ENST00000563667 AP4E1Q9UPM8 1137 aa16.06■□□□□ 0.16
PDXDC1-209ENST00000563667 PRUNE2Q8WUY3 3088 aa16.06■□□□□ 0.16
PDXDC1-209ENST00000563667 ATG2AQ2TAZ0 1938 aa16.06■□□□□ 0.16
PDXDC1-209ENST00000563667 F11P03951 625 aa16.05■□□□□ 0.16
PDXDC1-209ENST00000563667 HNRNPA1P09651 372 aaKnown RBP eCLIP16.05■□□□□ 0.16
PDXDC1-209ENST00000563667 PTPN2P17706 415 aa16.05■□□□□ 0.16
PDXDC1-209ENST00000563667 CCR1P32246 355 aa16.05■□□□□ 0.16
PDXDC1-209ENST00000563667 ADRA1BP35368 520 aa16.05■□□□□ 0.16
PDXDC1-209ENST00000563667 ATP5C1P36542 298 aaKnown RBP16.05■□□□□ 0.16
PDXDC1-209ENST00000563667 COPS2P61201 443 aa16.05■□□□□ 0.16
PDXDC1-209ENST00000563667 PDK2Q15119 407 aa16.05■□□□□ 0.16
PDXDC1-209ENST00000563667 PPP6R3Q5H9R7 873 aaPredicted RBP16.05■□□□□ 0.16
PDXDC1-209ENST00000563667 KAZNQ674X7 775 aa16.05■□□□□ 0.16
PDXDC1-209ENST00000563667 ANKRD54Q6NXT1 300 aa16.05■□□□□ 0.16
PDXDC1-209ENST00000563667 SLC13A5Q86YT5 568 aaPredicted RBP16.05■□□□□ 0.16
PDXDC1-209ENST00000563667 RFX6Q8HWS3 928 aa16.05■□□□□ 0.16
PDXDC1-209ENST00000563667 SMRP1Q8NCR6 262 aa16.05■□□□□ 0.16
PDXDC1-209ENST00000563667 MRPS31Q92665 395 aaKnown RBP16.05■□□□□ 0.16
PDXDC1-209ENST00000563667 NTAN1Q96AB6 310 aa16.05■□□□□ 0.16
PDXDC1-209ENST00000563667 MAK16Q9BXY0 300 aaKnown RBP16.05■□□□□ 0.16
PDXDC1-209ENST00000563667 TKTL2Q9H0I9 626 aa16.05■□□□□ 0.16
PDXDC1-209ENST00000563667 ATXN3LQ9H3M9 355 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms