RNA–Protein interactions for RNA: ENST00000563623.5

ABCA3-203, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 1 (best)

Gene ABCA3, Length 3,649 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-203ENST00000563623 CLIC5Q9NZA1 410 aa12.2□□□□□ -0.46
ABCA3-203ENST00000563623 RNASEH1O60930 286 aaKnown RBP12.2□□□□□ -0.46
ABCA3-203ENST00000563623 FKBP6O75344 327 aa12.2□□□□□ -0.46
ABCA3-203ENST00000563623 METTL18O95568 372 aa12.2□□□□□ -0.46
ABCA3-203ENST00000563623 SERPINA6P08185 405 aa12.2□□□□□ -0.46
ABCA3-203ENST00000563623 PEX2P28328 305 aa12.2□□□□□ -0.46
ABCA3-203ENST00000563623 BACE1P56817 501 aa12.2□□□□□ -0.46
ABCA3-203ENST00000563623 LY6KQ17RY6 165 aa12.2□□□□□ -0.46
ABCA3-203ENST00000563623 PPM1JQ5JR12 505 aa12.2□□□□□ -0.46
ABCA3-203ENST00000563623 ZPBP2Q6X784 338 aa12.2□□□□□ -0.46
ABCA3-203ENST00000563623 DHDDSQ86SQ9 333 aa12.2□□□□□ -0.46
ABCA3-203ENST00000563623 CAND1Q86VP6 1230 aaKnown RBP12.2□□□□□ -0.46
ABCA3-203ENST00000563623 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.2□□□□□ -0.46
ABCA3-203ENST00000563623 MIPOL1Q8TD10 442 aa12.2□□□□□ -0.46
ABCA3-203ENST00000563623 GATA6Q92908 595 aa12.2□□□□□ -0.46
ABCA3-203ENST00000563623 SDCBP2Q9H190 292 aa12.2□□□□□ -0.46
ABCA3-203ENST00000563623 ZNF831Q5JPB2 1677 aa12.2□□□□□ -0.46
ABCA3-203ENST00000563623 SLC15A5A6NIM6 579 aa12.19□□□□□ -0.46
ABCA3-203ENST00000563623 F8W8V4 182 aa12.19□□□□□ -0.46
ABCA3-203ENST00000563623 TPP1O14773 563 aa12.19□□□□□ -0.46
ABCA3-203ENST00000563623 KLHL2O95198 593 aa12.19□□□□□ -0.46
ABCA3-203ENST00000563623 P4HA1P13674 534 aa12.19□□□□□ -0.46
ABCA3-203ENST00000563623 TSHRP16473 764 aa12.19□□□□□ -0.46
ABCA3-203ENST00000563623 ZNF143P52747 638 aaPredicted RBP12.19□□□□□ -0.46
ABCA3-203ENST00000563623 GBE1Q04446 702 aa12.19□□□□□ -0.46
ABCA3-203ENST00000563623 BTKQ06187 659 aa12.19□□□□□ -0.46
ABCA3-203ENST00000563623 CCDC142Q17RM4 750 aa12.19□□□□□ -0.46
ABCA3-203ENST00000563623 CNPY1Q3B7I2 92 aa12.19□□□□□ -0.46
ABCA3-203ENST00000563623 CMPK2Q5EBM0 449 aa12.19□□□□□ -0.46
ABCA3-203ENST00000563623 CES4AQ5XG92 561 aa12.19□□□□□ -0.46
ABCA3-203ENST00000563623 PDPK2PQ6A1A2 396 aa12.19□□□□□ -0.46
ABCA3-203ENST00000563623 SLC4A11Q8NBS3 891 aa12.19□□□□□ -0.46
ABCA3-203ENST00000563623 ZNF280CQ8ND82 737 aa12.19□□□□□ -0.46
ABCA3-203ENST00000563623 ICA1LQ8NDH6 482 aa12.19□□□□□ -0.46
ABCA3-203ENST00000563623 FAM149B1Q96BN6 582 aa12.19□□□□□ -0.46
ABCA3-203ENST00000563623 NR1H4Q96RI1 486 aaPredicted RBP12.19□□□□□ -0.46
ABCA3-203ENST00000563623 SNRNP25Q9BV90 132 aaKnown RBP12.19□□□□□ -0.46
ABCA3-203ENST00000563623 MAGEB5Q9BZ81 275 aa12.19□□□□□ -0.46
ABCA3-203ENST00000563623 KLHL4Q9C0H6 718 aa12.19□□□□□ -0.46
ABCA3-203ENST00000563623 S100A14Q9HCY8 104 aa12.19□□□□□ -0.46
ABCA3-203ENST00000563623 CNTN3Q9P232 1028 aa12.19□□□□□ -0.46
ABCA3-203ENST00000563623 GTF2A2P52657 109 aa12.19□□□□□ -0.46
ABCA3-203ENST00000563623 NDST1P52848 882 aa12.19□□□□□ -0.46
ABCA3-203ENST00000563623 AQP4P55087 323 aa12.19□□□□□ -0.46
ABCA3-203ENST00000563623 DYNC1I2Q13409 638 aaKnown RBP12.19□□□□□ -0.46
ABCA3-203ENST00000563623 GOLGA7BQ2TAP0 167 aa12.19□□□□□ -0.46
ABCA3-203ENST00000563623 MPZL3Q6UWV2 235 aa12.19□□□□□ -0.46
ABCA3-203ENST00000563623 CDKL3Q8IVW4 592 aaPredicted RBP12.19□□□□□ -0.46
ABCA3-203ENST00000563623 HPDLQ96IR7 371 aa12.19□□□□□ -0.46
ABCA3-203ENST00000563623 TMEM134Q9H6X4 195 aa12.19□□□□□ -0.46
ABCA3-203ENST00000563623 AS3MTQ9HBK9 375 aa12.19□□□□□ -0.46
ABCA3-203ENST00000563623 BTBD7Q9P203 1132 aa12.19□□□□□ -0.46
ABCA3-203ENST00000563623 HESX1Q9UBX0 185 aa12.19□□□□□ -0.46
ABCA3-203ENST00000563623 TSPAN16Q9UKR8 245 aa12.19□□□□□ -0.46
ABCA3-203ENST00000563623 LACTBL1A8MY62 500 aa12.19□□□□□ -0.46
ABCA3-203ENST00000563623 UBA1P22314 1058 aaKnown RBP12.19□□□□□ -0.46
ABCA3-203ENST00000563623 CYP2F1P24903 491 aa12.19□□□□□ -0.46
ABCA3-203ENST00000563623 SERPINB5P36952 375 aa12.19□□□□□ -0.46
ABCA3-203ENST00000563623 SERPINB9P50453 376 aa12.19□□□□□ -0.46
ABCA3-203ENST00000563623 TBL3Q12788 808 aaKnown RBP12.19□□□□□ -0.46
ABCA3-203ENST00000563623 GSTA3Q16772 222 aa12.19□□□□□ -0.46
ABCA3-203ENST00000563623 LIN52Q52LA3 116 aa12.19□□□□□ -0.46
ABCA3-203ENST00000563623 SFT2D3Q587I9 215 aa12.19□□□□□ -0.46
ABCA3-203ENST00000563623 KCNT2Q6UVM3 1135 aa12.19□□□□□ -0.46
ABCA3-203ENST00000563623 C10orf107Q8IVU9 208 aa12.19□□□□□ -0.46
ABCA3-203ENST00000563623 TNS4Q8IZW8 715 aa12.19□□□□□ -0.46
ABCA3-203ENST00000563623 ARHGAP18Q8N392 663 aa12.19□□□□□ -0.46
ABCA3-203ENST00000563623 GALNT4Q8N4A0 578 aa12.19□□□□□ -0.46
ABCA3-203ENST00000563623 EBNA1BP2Q99848 306 aaKnown RBP12.19□□□□□ -0.46
ABCA3-203ENST00000563623 GORASP1Q9BQQ3 440 aa12.19□□□□□ -0.46
ABCA3-203ENST00000563623 ZNF358Q9NW07 568 aa12.19□□□□□ -0.46
ABCA3-203ENST00000563623 LOXHD1Q8IVV2 1947 aa12.19□□□□□ -0.46
ABCA3-203ENST00000563623 MSCO60682 206 aa12.18□□□□□ -0.46
ABCA3-203ENST00000563623 HOXC6P09630 235 aa12.18□□□□□ -0.46
ABCA3-203ENST00000563623 MLH1P40692 756 aa12.18□□□□□ -0.46
ABCA3-203ENST00000563623 ATXN1P54253 815 aaKnown RBP12.18□□□□□ -0.46
ABCA3-203ENST00000563623 JADE1Q6IE81 842 aa12.18□□□□□ -0.46
ABCA3-203ENST00000563623 ACOT1Q86TX2 421 aa12.18□□□□□ -0.46
ABCA3-203ENST00000563623 PCDH19Q8TAB3 1148 aa12.18□□□□□ -0.46
ABCA3-203ENST00000563623 SEPT1Q8WYJ6 367 aa12.18□□□□□ -0.46
ABCA3-203ENST00000563623 ABTB1Q969K4 478 aaPredicted RBP12.18□□□□□ -0.46
ABCA3-203ENST00000563623 B3GNT5Q9BYG0 378 aa12.18□□□□□ -0.46
ABCA3-203ENST00000563623 USP29Q9HBJ7 922 aa12.18□□□□□ -0.46
ABCA3-203ENST00000563623 CPSF3Q9UKF6 684 aaKnown RBP12.18□□□□□ -0.46
ABCA3-203ENST00000563623 ADGRA2Q96PE1 1338 aa12.18□□□□□ -0.46
ABCA3-203ENST00000563623 CAPN14A8MX76 684 aa12.18□□□□□ -0.46
ABCA3-203ENST00000563623 TRDMT1O14717 391 aaKnown RBP12.18□□□□□ -0.46
ABCA3-203ENST00000563623 PIGRP01833 764 aa12.18□□□□□ -0.46
ABCA3-203ENST00000563623 LCP1P13796 627 aa12.18□□□□□ -0.46
ABCA3-203ENST00000563623 TCN1P20061 433 aaPredicted RBP12.18□□□□□ -0.46
ABCA3-203ENST00000563623 MGAT1P26572 445 aa12.18□□□□□ -0.46
ABCA3-203ENST00000563623 ADORA2AP29274 412 aa12.18□□□□□ -0.46
ABCA3-203ENST00000563623 ENPEPQ07075 957 aa12.18□□□□□ -0.46
ABCA3-203ENST00000563623 MAP7Q14244 749 aa12.18□□□□□ -0.46
ABCA3-203ENST00000563623 AMHR2Q16671 573 aa12.18□□□□□ -0.46
ABCA3-203ENST00000563623 HSF5Q4G112 596 aaPredicted RBP12.18□□□□□ -0.46
ABCA3-203ENST00000563623 BOLA3Q53S33 107 aa12.18□□□□□ -0.46
ABCA3-203ENST00000563623 IER5Q5VY09 327 aa12.18□□□□□ -0.46
ABCA3-203ENST00000563623 RTKN2Q8IZC4 609 aa12.18□□□□□ -0.46
ABCA3-203ENST00000563623 FNIP1Q8TF40 1166 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms