RNA–Protein interactions for RNA: ENST00000563416.3

LINC00254-201, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 662 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-201ENST00000563416 C17orf80Q9BSJ5 609 aa5.78□□□□□ -1.48
LINC00254-201ENST00000563416 APOL5Q9BWW9 433 aa5.78□□□□□ -1.48
LINC00254-201ENST00000563416 BRIP1Q9BX63 1249 aa5.78□□□□□ -1.48
LINC00254-201ENST00000563416 FSD1LQ9BXM9 530 aa5.78□□□□□ -1.48
LINC00254-201ENST00000563416 TRIM5Q9C035 493 aa5.78□□□□□ -1.48
LINC00254-201ENST00000563416 ZCWPW1Q9H0M4 648 aa5.78□□□□□ -1.48
LINC00254-201ENST00000563416 CHST8Q9H2A9 424 aa5.78□□□□□ -1.48
LINC00254-201ENST00000563416 PANK3Q9H999 370 aa5.78□□□□□ -1.48
LINC00254-201ENST00000563416 MID2Q9UJV3 735 aa5.78□□□□□ -1.48
LINC00254-201ENST00000563416 ADAM21Q9UKJ8 722 aa5.78□□□□□ -1.48
LINC00254-201ENST00000563416 GABRQQ9UN88 632 aa5.78□□□□□ -1.48
LINC00254-201ENST00000563416 ADAMTS5Q9UNA0 930 aa5.78□□□□□ -1.48
LINC00254-201ENST00000563416 USP22Q9UPT9 525 aa5.78□□□□□ -1.48
LINC00254-201ENST00000563416 TBC1D30Q9Y2I9 924 aa5.78□□□□□ -1.48
LINC00254-201ENST00000563416 FLT4P35916 1363 aa5.78□□□□□ -1.48
LINC00254-201ENST00000563416 NPC1L1Q9UHC9 1359 aa5.78□□□□□ -1.48
LINC00254-201ENST00000563416 ARHGEF17Q96PE2 2063 aaPredicted RBP5.78□□□□□ -1.48
LINC00254-201ENST00000563416 DLG5Q8TDM6 1919 aa5.78□□□□□ -1.48
LINC00254-201ENST00000563416 TUBGCP6Q96RT7 1819 aa5.77□□□□□ -1.49
LINC00254-201ENST00000563416 TARM1B6A8C7 271 aa5.77□□□□□ -1.49
LINC00254-201ENST00000563416 RAB27BO00194 218 aa5.77□□□□□ -1.49
LINC00254-201ENST00000563416 RRP9O43818 475 aaKnown RBP5.77□□□□□ -1.49
LINC00254-201ENST00000563416 ERBB2P04626 1255 aa5.77□□□□□ -1.49
LINC00254-201ENST00000563416 IL1R2P27930 398 aa5.77□□□□□ -1.49
LINC00254-201ENST00000563416 HOXC9P31274 260 aa5.77□□□□□ -1.49
LINC00254-201ENST00000563416 SUMO2P61956 95 aaKnown RBP5.77□□□□□ -1.49
LINC00254-201ENST00000563416 MRPS21P82921 87 aaKnown RBP5.77□□□□□ -1.49
LINC00254-201ENST00000563416 OS9Q13438 667 aaPredicted RBP5.77□□□□□ -1.49
LINC00254-201ENST00000563416 SAFBQ15424 915 aaKnown RBP eCLIP5.77□□□□□ -1.49
LINC00254-201ENST00000563416 PTCHD3Q3KNS1 767 aa5.77□□□□□ -1.49
LINC00254-201ENST00000563416 MZT2AQ6P582 158 aa5.77□□□□□ -1.49
LINC00254-201ENST00000563416 ZNF788Q6ZQV5 615 aa5.77□□□□□ -1.49
LINC00254-201ENST00000563416 UNC13DQ70J99 1090 aa5.77□□□□□ -1.49
LINC00254-201ENST00000563416 TCP11L2Q8N4U5 519 aa5.77□□□□□ -1.49
LINC00254-201ENST00000563416 SAMD3Q8N6K7 520 aa5.77□□□□□ -1.49
LINC00254-201ENST00000563416 IP6K1Q92551 441 aa5.77□□□□□ -1.49
LINC00254-201ENST00000563416 SNX22Q96L94 193 aa5.77□□□□□ -1.49
LINC00254-201ENST00000563416 SARGQ9BW04 601 aa5.77□□□□□ -1.49
LINC00254-201ENST00000563416 INO80BQ9C086 356 aaPredicted RBP5.77□□□□□ -1.49
LINC00254-201ENST00000563416 SH3BP4Q9P0V3 963 aa5.77□□□□□ -1.49
LINC00254-201ENST00000563416 ZNF212Q9UDV6 495 aa5.77□□□□□ -1.49
LINC00254-201ENST00000563416 INSRP06213 1382 aa5.77□□□□□ -1.49
LINC00254-201ENST00000563416 BCL9O00512 1426 aa5.76□□□□□ -1.49
LINC00254-201ENST00000563416 SIPA1L3O60292 1781 aaPredicted RBP5.76□□□□□ -1.49
LINC00254-201ENST00000563416 MEGF6O75095 1541 aa5.76□□□□□ -1.49
LINC00254-201ENST00000563416 CD3EAPO15446 510 aaKnown RBP5.76□□□□□ -1.49
LINC00254-201ENST00000563416 CREB3O43889 395 aa5.76□□□□□ -1.49
LINC00254-201ENST00000563416 IL18RAPO95256 599 aa5.76□□□□□ -1.49
LINC00254-201ENST00000563416 MT-ND5P03915 603 aa5.76□□□□□ -1.49
LINC00254-201ENST00000563416 ANXA2P07355 339 aaKnown RBP5.76□□□□□ -1.49
LINC00254-201ENST00000563416 C21orf58P58505 322 aa5.76□□□□□ -1.49
LINC00254-201ENST00000563416 DAG1Q14118 895 aa5.76□□□□□ -1.49
LINC00254-201ENST00000563416 CCDC142Q17RM4 750 aa5.76□□□□□ -1.49
LINC00254-201ENST00000563416 LY6KQ17RY6 165 aa5.76□□□□□ -1.49
LINC00254-201ENST00000563416 ZNF750Q32MQ0 723 aa5.76□□□□□ -1.49
LINC00254-201ENST00000563416 COBLL1Q53SF7 1204 aa5.76□□□□□ -1.49
LINC00254-201ENST00000563416 DENND2CQ68D51 928 aa5.76□□□□□ -1.49
LINC00254-201ENST00000563416 TOM1L2Q6ZVM7 507 aa5.76□□□□□ -1.49
LINC00254-201ENST00000563416 RNF44Q7L0R7 432 aa5.76□□□□□ -1.49
LINC00254-201ENST00000563416 KRT27Q7Z3Y8 459 aa5.76□□□□□ -1.49
LINC00254-201ENST00000563416 SIRT6Q8N6T7 355 aa5.76□□□□□ -1.49
LINC00254-201ENST00000563416 VN1R3Q9BXE9 311 aa5.76□□□□□ -1.49
LINC00254-201ENST00000563416 ZNF700Q9H0M5 742 aa5.76□□□□□ -1.49
LINC00254-201ENST00000563416 ARNT2Q9HBZ2 717 aa5.76□□□□□ -1.49
LINC00254-201ENST00000563416 ADARB2Q9NS39 739 aaKnown RBP5.76□□□□□ -1.49
LINC00254-201ENST00000563416 CORO2BQ9UQ03 480 aa5.76□□□□□ -1.49
LINC00254-201ENST00000563416 DRG1Q9Y295 367 aaKnown RBP5.76□□□□□ -1.49
LINC00254-201ENST00000563416 COL3A1P02461 1466 aaPredicted RBP5.76□□□□□ -1.49
LINC00254-201ENST00000563416 ADAMTS7Q9UKP4 1686 aa5.75□□□□□ -1.49
LINC00254-201ENST00000563416 OVOS2A0A0G2JMS6 1433 aa5.75□□□□□ -1.49
LINC00254-201ENST00000563416 M0R3H8 397 aa5.75□□□□□ -1.49
LINC00254-201ENST00000563416 THAP12O43422 761 aa5.75□□□□□ -1.49
LINC00254-201ENST00000563416 PARP1P09874 1014 aaKnown RBP5.75□□□□□ -1.49
LINC00254-201ENST00000563416 IL1R1P14778 569 aa5.75□□□□□ -1.49
LINC00254-201ENST00000563416 PHKG2P15735 406 aa5.75□□□□□ -1.49
LINC00254-201ENST00000563416 BTF3P20290 206 aaKnown RBP5.75□□□□□ -1.49
LINC00254-201ENST00000563416 CTGFP29279 349 aa5.75□□□□□ -1.49
LINC00254-201ENST00000563416 UQCRC1P31930 480 aa5.75□□□□□ -1.49
LINC00254-201ENST00000563416 ITGA8P53708 1063 aa5.75□□□□□ -1.49
LINC00254-201ENST00000563416 HOXA4Q00056 320 aaPredicted RBP5.75□□□□□ -1.49
LINC00254-201ENST00000563416 IFIT5Q13325 482 aaKnown RBP5.75□□□□□ -1.49
LINC00254-201ENST00000563416 RRS1Q15050 365 aaKnown RBP5.75□□□□□ -1.49
LINC00254-201ENST00000563416 BRD3Q15059 726 aa5.75□□□□□ -1.49
LINC00254-201ENST00000563416 NPY5RQ15761 445 aa5.75□□□□□ -1.49
LINC00254-201ENST00000563416 FCRL6Q6DN72 434 aa5.75□□□□□ -1.49
LINC00254-201ENST00000563416 KCTD20Q7Z5Y7 419 aa5.75□□□□□ -1.49
LINC00254-201ENST00000563416 IQCDQ96DY2 449 aa5.75□□□□□ -1.49
LINC00254-201ENST00000563416 DAZAP1Q96EP5 407 aaKnown RBP5.75□□□□□ -1.49
LINC00254-201ENST00000563416 TFCP2L1Q9NZI6 479 aa5.75□□□□□ -1.49
LINC00254-201ENST00000563416 FAM50BQ9Y247 325 aa5.75□□□□□ -1.49
LINC00254-201ENST00000563416 PLEKHG2Q9H7P9 1386 aa5.75□□□□□ -1.49
LINC00254-201ENST00000563416 ZNF831Q5JPB2 1677 aa5.75□□□□□ -1.49
LINC00254-201ENST00000563416 PAPPAQ13219 1627 aa5.74□□□□□ -1.49
LINC00254-201ENST00000563416 ZNF213O14771 459 aa5.74□□□□□ -1.49
LINC00254-201ENST00000563416 RBMXL2O75526 392 aaKnown RBP5.74□□□□□ -1.49
LINC00254-201ENST00000563416 VNN1O95497 513 aa5.74□□□□□ -1.49
LINC00254-201ENST00000563416 PRKCGP05129 697 aa5.74□□□□□ -1.49
LINC00254-201ENST00000563416 MYCLP12524 364 aaPredicted RBP5.74□□□□□ -1.49
LINC00254-201ENST00000563416 TRIM27P14373 513 aa5.74□□□□□ -1.49
LINC00254-201ENST00000563416 GKP32189 559 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms