RNA–Protein interactions for RNA: ENST00000563366.5

UBFD1-202, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 709 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-202ENST00000563366 HDXQ7Z353 690 aa10.09□□□□□ -0.79
UBFD1-202ENST00000563366 JAMLQ86YT9 394 aa10.09□□□□□ -0.79
UBFD1-202ENST00000563366 GPR65Q8IYL9 337 aa10.09□□□□□ -0.79
UBFD1-202ENST00000563366 DEFB106AQ8N104 65 aa10.09□□□□□ -0.79
UBFD1-202ENST00000563366 MEIOBQ8N635 442 aa10.09□□□□□ -0.79
UBFD1-202ENST00000563366 ARFGAP1Q8N6T3 406 aa10.09□□□□□ -0.79
UBFD1-202ENST00000563366 CCDC89Q8N998 374 aa10.09□□□□□ -0.79
UBFD1-202ENST00000563366 ATL2Q8NHH9 583 aa10.09□□□□□ -0.79
UBFD1-202ENST00000563366 CLEC4CQ8WTT0 213 aa10.09□□□□□ -0.79
UBFD1-202ENST00000563366 SCG3Q8WXD2 468 aaKnown RBP10.09□□□□□ -0.79
UBFD1-202ENST00000563366 PIK3R5Q8WYR1 880 aa10.09□□□□□ -0.79
UBFD1-202ENST00000563366 HSPH1Q92598 858 aa10.09□□□□□ -0.79
UBFD1-202ENST00000563366 ZNF689Q96CS4 500 aaPredicted RBP10.09□□□□□ -0.79
UBFD1-202ENST00000563366 TMEM169Q96HH4 297 aa10.09□□□□□ -0.79
UBFD1-202ENST00000563366 IGSF21Q96ID5 467 aa10.09□□□□□ -0.79
UBFD1-202ENST00000563366 KCNK16Q96T55 309 aa10.09□□□□□ -0.79
UBFD1-202ENST00000563366 NPY6RQ99463 290 aa10.09□□□□□ -0.79
UBFD1-202ENST00000563366 ERP44Q9BS26 406 aa10.09□□□□□ -0.79
UBFD1-202ENST00000563366 CALN1Q9BXU9 219 aa10.09□□□□□ -0.79
UBFD1-202ENST00000563366 GPR62Q9BZJ7 368 aa10.09□□□□□ -0.79
UBFD1-202ENST00000563366 DCLK3Q9C098 648 aa10.09□□□□□ -0.79
UBFD1-202ENST00000563366 TSPYL1Q9H0U9 437 aa10.09□□□□□ -0.79
UBFD1-202ENST00000563366 ABCC13Q9NSE7 274 aa10.09□□□□□ -0.79
UBFD1-202ENST00000563366 HSFX1Q9UBD0 423 aa10.09□□□□□ -0.79
UBFD1-202ENST00000563366 BACE2Q9Y5Z0 518 aa10.09□□□□□ -0.79
UBFD1-202ENST00000563366 CEP350Q5VT06 3117 aa10.09□□□□□ -0.79
UBFD1-202ENST00000563366 PTPRSQ13332 1948 aa10.09□□□□□ -0.79
UBFD1-202ENST00000563366 ALPK3Q96L96 1907 aa10.09□□□□□ -0.79
UBFD1-202ENST00000563366 ZNF638Q14966 1978 aaKnown RBP10.08□□□□□ -0.8
UBFD1-202ENST00000563366 GREB1Q4ZG55 1949 aa10.08□□□□□ -0.8
UBFD1-202ENST00000563366 TRIM43BA6NCK2 446 aa10.08□□□□□ -0.8
UBFD1-202ENST00000563366 A6NJY4 79 aa10.08□□□□□ -0.8
UBFD1-202ENST00000563366 C3orf70A6NLC5 250 aaPredicted RBP10.08□□□□□ -0.8
UBFD1-202ENST00000563366 APOC4-APOC2K7ER74 178 aa10.08□□□□□ -0.8
UBFD1-202ENST00000563366 M0QYT0 321 aa10.08□□□□□ -0.8
UBFD1-202ENST00000563366 CAPN5O15484 640 aaPredicted RBP10.08□□□□□ -0.8
UBFD1-202ENST00000563366 APOC2P02655 101 aa10.08□□□□□ -0.8
UBFD1-202ENST00000563366 SOD2P04179 222 aa10.08□□□□□ -0.8
UBFD1-202ENST00000563366 USP17L7P0C7H9 530 aa10.08□□□□□ -0.8
UBFD1-202ENST00000563366 NCAM1P13591 858 aa10.08□□□□□ -0.8
UBFD1-202ENST00000563366 TGM2P21980 687 aa10.08□□□□□ -0.8
UBFD1-202ENST00000563366 IGFBP4P22692 258 aa10.08□□□□□ -0.8
UBFD1-202ENST00000563366 IL1R2P27930 398 aa10.08□□□□□ -0.8
UBFD1-202ENST00000563366 ARL4AP40617 200 aa10.08□□□□□ -0.8
UBFD1-202ENST00000563366 SLC5A3P53794 718 aa10.08□□□□□ -0.8
UBFD1-202ENST00000563366 EPHA4P54764 986 aa10.08□□□□□ -0.8
UBFD1-202ENST00000563366 CAV1Q03135 178 aa10.08□□□□□ -0.8
UBFD1-202ENST00000563366 FPGSQ05932 587 aa10.08□□□□□ -0.8
UBFD1-202ENST00000563366 DEUP1Q05D60 604 aa10.08□□□□□ -0.8
UBFD1-202ENST00000563366 CALCOCO2Q13137 446 aa10.08□□□□□ -0.8
UBFD1-202ENST00000563366 MTA1Q13330 715 aa10.08□□□□□ -0.8
UBFD1-202ENST00000563366 BYSLQ13895 437 aaKnown RBP10.08□□□□□ -0.8
UBFD1-202ENST00000563366 HLTFQ14527 1009 aaKnown RBP eCLIP10.08□□□□□ -0.8
UBFD1-202ENST00000563366 CCDC142Q17RM4 750 aa10.08□□□□□ -0.8
UBFD1-202ENST00000563366 ATP13A4Q4VNC1 1196 aa10.08□□□□□ -0.8
UBFD1-202ENST00000563366 EFHC2Q5JST6 749 aa10.08□□□□□ -0.8
UBFD1-202ENST00000563366 KCNT1Q5JUK3 1230 aa10.08□□□□□ -0.8
UBFD1-202ENST00000563366 BEND6Q5SZJ8 279 aaPredicted RBP10.08□□□□□ -0.8
UBFD1-202ENST00000563366 KAZNQ674X7 775 aa10.08□□□□□ -0.8
UBFD1-202ENST00000563366 SLC8B1Q6J4K2 584 aa10.08□□□□□ -0.8
UBFD1-202ENST00000563366 KCNT2Q6UVM3 1135 aa10.08□□□□□ -0.8
UBFD1-202ENST00000563366 CEP128Q6ZU80 1094 aa10.08□□□□□ -0.8
UBFD1-202ENST00000563366 ZNF365Q70YC5 407 aa10.08□□□□□ -0.8
UBFD1-202ENST00000563366 LRRTM3Q86VH5 581 aa10.08□□□□□ -0.8
UBFD1-202ENST00000563366 RNF168Q8IYW5 571 aaPredicted RBP10.08□□□□□ -0.8
UBFD1-202ENST00000563366 NUP93Q8N1F7 819 aa10.08□□□□□ -0.8
UBFD1-202ENST00000563366 BBOF1Q8ND07 529 aa10.08□□□□□ -0.8
UBFD1-202ENST00000563366 FAM71BQ8TC56 605 aa10.08□□□□□ -0.8
UBFD1-202ENST00000563366 HDAC7Q8WUI4 952 aa10.08□□□□□ -0.8
UBFD1-202ENST00000563366 RAPGEF5Q92565 580 aa10.08□□□□□ -0.8
UBFD1-202ENST00000563366 NKD2Q969F2 451 aaPredicted RBP10.08□□□□□ -0.8
UBFD1-202ENST00000563366 CAVIN3Q969G5 261 aa10.08□□□□□ -0.8
UBFD1-202ENST00000563366 NTAN1Q96AB6 310 aa10.08□□□□□ -0.8
UBFD1-202ENST00000563366 TRIM43Q96BQ3 446 aaPredicted RBP10.08□□□□□ -0.8
UBFD1-202ENST00000563366 HAUS1Q96CS2 278 aa10.08□□□□□ -0.8
UBFD1-202ENST00000563366 CCDC114Q96M63 670 aa10.08□□□□□ -0.8
UBFD1-202ENST00000563366 TMEM209Q96SK2 561 aa10.08□□□□□ -0.8
UBFD1-202ENST00000563366 YME1L1Q96TA2 773 aa10.08□□□□□ -0.8
UBFD1-202ENST00000563366 SNRNP25Q9BV90 132 aaKnown RBP10.08□□□□□ -0.8
UBFD1-202ENST00000563366 HEMGNQ9BXL5 484 aa10.08□□□□□ -0.8
UBFD1-202ENST00000563366 TSPAN10Q9H1Z9 355 aaPredicted RBP10.08□□□□□ -0.8
UBFD1-202ENST00000563366 MTIF3Q9H2K0 278 aaKnown RBP10.08□□□□□ -0.8
UBFD1-202ENST00000563366 CWH43Q9H720 699 aa10.08□□□□□ -0.8
UBFD1-202ENST00000563366 VIPAS39Q9H9C1 493 aa10.08□□□□□ -0.8
UBFD1-202ENST00000563366 RC3H2Q9HBD1 1191 aaKnown RBP10.08□□□□□ -0.8
UBFD1-202ENST00000563366 TMLHEQ9NVH6 421 aa10.08□□□□□ -0.8
UBFD1-202ENST00000563366 KLHL11Q9NVR0 708 aa10.08□□□□□ -0.8
UBFD1-202ENST00000563366 MTRRQ9UBK8 725 aa10.08□□□□□ -0.8
UBFD1-202ENST00000563366 MTRF1LQ9UGC7 380 aaKnown RBP10.08□□□□□ -0.8
UBFD1-202ENST00000563366 AP4E1Q9UPM8 1137 aa10.08□□□□□ -0.8
UBFD1-202ENST00000563366 DRG1Q9Y295 367 aaKnown RBP10.08□□□□□ -0.8
UBFD1-202ENST00000563366 SSX2IPQ9Y2D8 614 aa10.08□□□□□ -0.8
UBFD1-202ENST00000563366 KIAA0100Q14667 2235 aaKnown RBP10.08□□□□□ -0.8
UBFD1-202ENST00000563366 TCRBV7S2A1N4TA0A589 114 aa10.07□□□□□ -0.8
UBFD1-202ENST00000563366 YJEFN3A6XGL0 299 aa10.07□□□□□ -0.8
UBFD1-202ENST00000563366 E7ENQ6 273 aa10.07□□□□□ -0.8
UBFD1-202ENST00000563366 TNFRSF10BO14763 440 aa10.07□□□□□ -0.8
UBFD1-202ENST00000563366 APOL1O14791 398 aa10.07□□□□□ -0.8
UBFD1-202ENST00000563366 MCF2LO15068 1137 aa10.07□□□□□ -0.8
UBFD1-202ENST00000563366 LIASO43766 372 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms