RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 METTL18O95568 372 aa19.8■□□□□ 0.76
SMPD3-203ENST00000563226 ELK3P41970 407 aa19.8■□□□□ 0.76
SMPD3-203ENST00000563226 NR2C2P49116 596 aa19.8■□□□□ 0.76
SMPD3-203ENST00000563226 XRCC4Q13426 336 aa19.8■□□□□ 0.76
SMPD3-203ENST00000563226 EFHC2Q5JST6 749 aa19.8■□□□□ 0.76
SMPD3-203ENST00000563226 C3orf62Q6ZUJ4 267 aa19.8■□□□□ 0.76
SMPD3-203ENST00000563226 METTL23Q86XA0 190 aa19.8■□□□□ 0.76
SMPD3-203ENST00000563226 PSTKQ8IV42 348 aaKnown RBP19.8■□□□□ 0.76
SMPD3-203ENST00000563226 FBF1Q8TES7 1133 aa19.8■□□□□ 0.76
SMPD3-203ENST00000563226 EDEM1Q92611 657 aa19.8■□□□□ 0.76
SMPD3-203ENST00000563226 OLFM3Q96PB7 478 aa19.8■□□□□ 0.76
SMPD3-203ENST00000563226 KIF9Q9HAQ2 790 aa19.8■□□□□ 0.76
SMPD3-203ENST00000563226 C5orf60A6NFR6 353 aa19.79■□□□□ 0.76
SMPD3-203ENST00000563226 FAM72CH0Y354 149 aa19.79■□□□□ 0.76
SMPD3-203ENST00000563226 CREB3O43889 395 aa19.79■□□□□ 0.76
SMPD3-203ENST00000563226 LTFP02788 710 aa19.79■□□□□ 0.76
SMPD3-203ENST00000563226 NCAM1P13591 858 aa19.79■□□□□ 0.76
SMPD3-203ENST00000563226 PKN2Q16513 984 aaKnown RBP19.79■□□□□ 0.76
SMPD3-203ENST00000563226 FAM72AQ5TYM5 149 aa19.79■□□□□ 0.76
SMPD3-203ENST00000563226 LHX8Q68G74 356 aa19.79■□□□□ 0.76
SMPD3-203ENST00000563226 FAM72DQ6L9T8 149 aa19.79■□□□□ 0.76
SMPD3-203ENST00000563226 TRABD2AQ86V40 505 aa19.79■□□□□ 0.76
SMPD3-203ENST00000563226 FAM72BQ86X60 149 aa19.79■□□□□ 0.76
SMPD3-203ENST00000563226 ZNF280BQ86YH2 543 aa19.79■□□□□ 0.76
SMPD3-203ENST00000563226 RGS18Q9NS28 235 aa19.79■□□□□ 0.76
SMPD3-203ENST00000563226 RCOR3Q9P2K3 495 aaPredicted RBP19.79■□□□□ 0.76
SMPD3-203ENST00000563226 PATJQ8NI35 1801 aa19.79■□□□□ 0.76
SMPD3-203ENST00000563226 A0A1W2PQ45 241 aaPredicted RBP19.79■□□□□ 0.76
SMPD3-203ENST00000563226 A0A1W2PQY0 241 aa19.79■□□□□ 0.76
SMPD3-203ENST00000563226 C9IYK1 514 aa19.79■□□□□ 0.76
SMPD3-203ENST00000563226 DGKIO75912 1065 aa19.79■□□□□ 0.76
SMPD3-203ENST00000563226 INHAP05111 366 aa19.79■□□□□ 0.76
SMPD3-203ENST00000563226 SKIP12755 728 aa19.79■□□□□ 0.76
SMPD3-203ENST00000563226 HOXD10P28358 340 aa19.79■□□□□ 0.76
SMPD3-203ENST00000563226 CLLU1OSQ5K130 101 aa19.79■□□□□ 0.76
SMPD3-203ENST00000563226 OVOS1Q6IE37 1185 aa19.79■□□□□ 0.76
SMPD3-203ENST00000563226 PALM2Q8IXS6 379 aa19.79■□□□□ 0.76
SMPD3-203ENST00000563226 LRRC34Q8IZ02 419 aa19.79■□□□□ 0.76
SMPD3-203ENST00000563226 LGMNQ99538 433 aa19.79■□□□□ 0.76
SMPD3-203ENST00000563226 CCDC134Q9H6E4 229 aa19.79■□□□□ 0.76
SMPD3-203ENST00000563226 TEX264Q9Y6I9 313 aa19.79■□□□□ 0.76
SMPD3-203ENST00000563226 SQORQ9Y6N5 450 aa19.79■□□□□ 0.76
SMPD3-203ENST00000563226 FAM169AQ9Y6X4 670 aa19.79■□□□□ 0.76
SMPD3-203ENST00000563226 COL4A4P53420 1690 aaPredicted RBP19.78■□□□□ 0.76
SMPD3-203ENST00000563226 MOXD2PA6NHM9 499 aa19.78■□□□□ 0.76
SMPD3-203ENST00000563226 DDHD2O94830 711 aa19.78■□□□□ 0.76
SMPD3-203ENST00000563226 APRTP07741 180 aa19.78■□□□□ 0.76
SMPD3-203ENST00000563226 TP53INP2Q8IXH6 220 aa19.78■□□□□ 0.76
SMPD3-203ENST00000563226 SUSD3Q96L08 255 aa19.78■□□□□ 0.76
SMPD3-203ENST00000563226 UROC1Q96N76 676 aa19.78■□□□□ 0.76
SMPD3-203ENST00000563226 KLC2Q9H0B6 622 aa19.78■□□□□ 0.76
SMPD3-203ENST00000563226 MYO18AQ92614 2054 aaKnown RBP19.78■□□□□ 0.76
SMPD3-203ENST00000563226 KBTBD13C9JR72 458 aa19.77■□□□□ 0.76
SMPD3-203ENST00000563226 H3BRJ5 948 aa19.77■□□□□ 0.76
SMPD3-203ENST00000563226 INPPL1O15357 1258 aa19.77■□□□□ 0.76
SMPD3-203ENST00000563226 GCATO75600 419 aa19.77■□□□□ 0.76
SMPD3-203ENST00000563226 PHBP35232 272 aa19.77■□□□□ 0.76
SMPD3-203ENST00000563226 ADRA1BP35368 520 aa19.77■□□□□ 0.76
SMPD3-203ENST00000563226 MAGEA6P43360 314 aa19.77■□□□□ 0.76
SMPD3-203ENST00000563226 DPYSQ14117 519 aa19.77■□□□□ 0.76
SMPD3-203ENST00000563226 DCLRE1AQ6PJP8 1040 aa19.77■□□□□ 0.76
SMPD3-203ENST00000563226 CAND1Q86VP6 1230 aaKnown RBP19.77■□□□□ 0.76
SMPD3-203ENST00000563226 ACSS3Q9H6R3 686 aa19.77■□□□□ 0.76
SMPD3-203ENST00000563226 DDIT4Q9NX09 232 aa19.77■□□□□ 0.76
SMPD3-203ENST00000563226 SLC24A2Q9UI40 661 aa19.77■□□□□ 0.76
SMPD3-203ENST00000563226 ACTL7BQ9Y614 415 aa19.77■□□□□ 0.76
SMPD3-203ENST00000563226 F5H423 210 aaPredicted RBP19.77■□□□□ 0.75
SMPD3-203ENST00000563226 SPAG7O75391 227 aa19.77■□□□□ 0.75
SMPD3-203ENST00000563226 GEMIN4P57678 1058 aaKnown RBP19.77■□□□□ 0.75
SMPD3-203ENST00000563226 HEATR6Q6AI08 1181 aaKnown RBP19.77■□□□□ 0.75
SMPD3-203ENST00000563226 CPLX4Q7Z7G2 160 aa19.77■□□□□ 0.75
SMPD3-203ENST00000563226 GDAP1Q8TB36 358 aa19.77■□□□□ 0.75
SMPD3-203ENST00000563226 PXYLP1Q8TE99 480 aa19.77■□□□□ 0.75
SMPD3-203ENST00000563226 CFHR5Q9BXR6 569 aa19.77■□□□□ 0.75
SMPD3-203ENST00000563226 PSMC3IPQ9P2W1 217 aaPredicted RBP19.77■□□□□ 0.75
SMPD3-203ENST00000563226 DSEQ9UL01 958 aa19.77■□□□□ 0.75
SMPD3-203ENST00000563226 EEF2KO00418 725 aaKnown RBP19.76■□□□□ 0.75
SMPD3-203ENST00000563226 SF3A3Q12874 501 aaKnown RBP eCLIP19.76■□□□□ 0.75
SMPD3-203ENST00000563226 RFX8Q6ZV50 586 aa19.76■□□□□ 0.75
SMPD3-203ENST00000563226 ZNF534Q76KX8 674 aa19.76■□□□□ 0.75
SMPD3-203ENST00000563226 TFB1MQ8WVM0 346 aaKnown RBP19.76■□□□□ 0.75
SMPD3-203ENST00000563226 HTR3CQ8WXA8 447 aa19.76■□□□□ 0.75
SMPD3-203ENST00000563226 PAFAH2Q99487 392 aa19.76■□□□□ 0.75
SMPD3-203ENST00000563226 DHRS4Q9BTZ2 278 aa19.76■□□□□ 0.75
SMPD3-203ENST00000563226 DMAP1Q9NPF5 467 aaPredicted RBP19.76■□□□□ 0.75
SMPD3-203ENST00000563226 STARD7Q9NQZ5 370 aa19.76■□□□□ 0.75
SMPD3-203ENST00000563226 SNX10Q9Y5X0 201 aa19.76■□□□□ 0.75
SMPD3-203ENST00000563226 A0A1W2PPM1 405 aa19.75■□□□□ 0.75
SMPD3-203ENST00000563226 OR4Q2P0C623 313 aa19.75■□□□□ 0.75
SMPD3-203ENST00000563226 KRT15P19012 456 aa19.75■□□□□ 0.75
SMPD3-203ENST00000563226 GLB1LQ6UWU2 654 aa19.75■□□□□ 0.75
SMPD3-203ENST00000563226 PPP1R21Q6ZMI0 780 aa19.75■□□□□ 0.75
SMPD3-203ENST00000563226 SLC24A5Q71RS6 500 aa19.75■□□□□ 0.75
SMPD3-203ENST00000563226 C4orf33Q8N1A6 199 aa19.75■□□□□ 0.75
SMPD3-203ENST00000563226 SLC43A3Q8NBI5 491 aa19.75■□□□□ 0.75
SMPD3-203ENST00000563226 SCAMP5Q8TAC9 235 aa19.75■□□□□ 0.75
SMPD3-203ENST00000563226 DYDC1Q8WWB3 177 aa19.75■□□□□ 0.75
SMPD3-203ENST00000563226 NTAN1Q96AB6 310 aa19.75■□□□□ 0.75
SMPD3-203ENST00000563226 PGAP3Q96FM1 320 aaPredicted RBP19.75■□□□□ 0.75
SMPD3-203ENST00000563226 SEC16BQ96JE7 1060 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms