RNA–Protein interactions for RNA: ENST00000562357.5

CMTM3-204, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 4

Gene CMTM3, Length 792 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-204ENST00000562357 PCDHGA5Q9Y5G8 931 aa18.6■□□□□ 0.57
CMTM3-204ENST00000562357 MYOFQ9NZM1 2061 aa18.59■□□□□ 0.57
CMTM3-204ENST00000562357 KCNJ18B7U540 433 aa18.59■□□□□ 0.57
CMTM3-204ENST00000562357 MSI1O43347 362 aaKnown RBP18.59■□□□□ 0.57
CMTM3-204ENST00000562357 EPN2O95208 641 aa18.59■□□□□ 0.57
CMTM3-204ENST00000562357 EEF1GP26641 437 aaKnown RBP18.59■□□□□ 0.57
CMTM3-204ENST00000562357 SLC11A2P49281 568 aa18.59■□□□□ 0.57
CMTM3-204ENST00000562357 KCNJ12Q14500 433 aa18.59■□□□□ 0.57
CMTM3-204ENST00000562357 CSRP2Q16527 193 aa18.59■□□□□ 0.57
CMTM3-204ENST00000562357 PLK5Q496M5 336 aa18.59■□□□□ 0.57
CMTM3-204ENST00000562357 MPPE1Q53F39 396 aa18.59■□□□□ 0.57
CMTM3-204ENST00000562357 HSP90AA4PQ58FG1 418 aa18.59■□□□□ 0.57
CMTM3-204ENST00000562357 FYB2Q5VWT5 728 aa18.59■□□□□ 0.57
CMTM3-204ENST00000562357 EGFLAMQ63HQ2 1017 aa18.59■□□□□ 0.57
CMTM3-204ENST00000562357 TOGARAM2Q6ZUX3 1019 aa18.59■□□□□ 0.57
CMTM3-204ENST00000562357 SCUBE3Q8IX30 993 aa18.59■□□□□ 0.57
CMTM3-204ENST00000562357 C12orf50Q8NA57 414 aaPredicted RBP18.59■□□□□ 0.57
CMTM3-204ENST00000562357 HMGB4Q8WW32 186 aa18.59■□□□□ 0.57
CMTM3-204ENST00000562357 SHC3Q92529 594 aa18.59■□□□□ 0.57
CMTM3-204ENST00000562357 SERPINB11Q96P15 392 aa18.59■□□□□ 0.57
CMTM3-204ENST00000562357 SLC2A11Q9BYW1 496 aa18.59■□□□□ 0.57
CMTM3-204ENST00000562357 PARD6AQ9NPB6 346 aa18.59■□□□□ 0.57
CMTM3-204ENST00000562357 SLC27A6Q9Y2P4 619 aa18.59■□□□□ 0.57
CMTM3-204ENST00000562357 ZNF292O60281 2723 aa18.59■□□□□ 0.57
CMTM3-204ENST00000562357 ANTXRLA6NF34 631 aa18.58■□□□□ 0.56
CMTM3-204ENST00000562357 ADAM23O75077 832 aa18.58■□□□□ 0.56
CMTM3-204ENST00000562357 TBX4P57082 545 aa18.58■□□□□ 0.56
CMTM3-204ENST00000562357 SNX16P57768 344 aa18.58■□□□□ 0.56
CMTM3-204ENST00000562357 ARID5AQ03989 594 aa18.58■□□□□ 0.56
CMTM3-204ENST00000562357 ADGRF1Q5T601 910 aa18.58■□□□□ 0.56
CMTM3-204ENST00000562357 SASS6Q6UVJ0 657 aa18.58■□□□□ 0.56
CMTM3-204ENST00000562357 ANKS1BQ7Z6G8 1248 aa18.58■□□□□ 0.56
CMTM3-204ENST00000562357 FAM217AQ8IXS0 508 aa18.58■□□□□ 0.56
CMTM3-204ENST00000562357 CLEC4CQ8WTT0 213 aa18.58■□□□□ 0.56
CMTM3-204ENST00000562357 RMDN1Q96DB5 314 aa18.58■□□□□ 0.56
CMTM3-204ENST00000562357 DDX50Q9BQ39 737 aaKnown RBP18.58■□□□□ 0.56
CMTM3-204ENST00000562357 ARRDC1-AS1Q9H2J1 176 aa18.58■□□□□ 0.56
CMTM3-204ENST00000562357 DNAJC12Q9UKB3 198 aa18.58■□□□□ 0.56
CMTM3-204ENST00000562357 NFE2L3Q9Y4A8 694 aa18.58■□□□□ 0.56
CMTM3-204ENST00000562357 KIAA1549LQ6ZVL6 1849 aa18.58■□□□□ 0.56
CMTM3-204ENST00000562357 TYW5A2RUC4 315 aaKnown RBP18.57■□□□□ 0.56
CMTM3-204ENST00000562357 BECN2A8MW95 431 aa18.57■□□□□ 0.56
CMTM3-204ENST00000562357 GFRA2O00451 464 aa18.57■□□□□ 0.56
CMTM3-204ENST00000562357 DCLK1O15075 740 aa18.57■□□□□ 0.56
CMTM3-204ENST00000562357 NPC1O15118 1278 aa18.57■□□□□ 0.56
CMTM3-204ENST00000562357 MAP3K13O43283 966 aa18.57■□□□□ 0.56
CMTM3-204ENST00000562357 MBD3O95983 291 aa18.57■□□□□ 0.56
CMTM3-204ENST00000562357 CISD3P0C7P0 127 aa18.57■□□□□ 0.56
CMTM3-204ENST00000562357 KRT9P35527 623 aa18.57■□□□□ 0.56
CMTM3-204ENST00000562357 WASP42768 502 aa18.57■□□□□ 0.56
CMTM3-204ENST00000562357 RPL34P49207 117 aaKnown RBP18.57■□□□□ 0.56
CMTM3-204ENST00000562357 BPIFB4P59827 614 aa18.57■□□□□ 0.56
CMTM3-204ENST00000562357 RING1Q06587 406 aa18.57■□□□□ 0.56
CMTM3-204ENST00000562357 PDCLQ13371 301 aa18.57■□□□□ 0.56
CMTM3-204ENST00000562357 STARD3Q14849 445 aa18.57■□□□□ 0.56
CMTM3-204ENST00000562357 EIF4HQ15056 248 aaKnown RBP18.57■□□□□ 0.56
CMTM3-204ENST00000562357 RSPO4Q2I0M5 234 aaPredicted RBP18.57■□□□□ 0.56
CMTM3-204ENST00000562357 TCP11X2Q5H9J9 407 aa18.57■□□□□ 0.56
CMTM3-204ENST00000562357 PRR23CQ6ZRP0 262 aa18.57■□□□□ 0.56
CMTM3-204ENST00000562357 ERMP1Q7Z2K6 904 aa18.57■□□□□ 0.56
CMTM3-204ENST00000562357 TMA16Q96EY4 203 aaKnown RBP18.57■□□□□ 0.56
CMTM3-204ENST00000562357 SLC4A5Q9BY07 1137 aa18.57■□□□□ 0.56
CMTM3-204ENST00000562357 PDCL3Q9H2J4 239 aa18.57■□□□□ 0.56
CMTM3-204ENST00000562357 FBXO10Q9UK96 956 aa18.57■□□□□ 0.56
CMTM3-204ENST00000562357 INVSQ9Y283 1065 aa18.57■□□□□ 0.56
CMTM3-204ENST00000562357 PRRT4C9JH25 899 aa18.56■□□□□ 0.56
CMTM3-204ENST00000562357 E5RJQ4 531 aa18.56■□□□□ 0.56
CMTM3-204ENST00000562357 TSPAN3O60637 253 aa18.56■□□□□ 0.56
CMTM3-204ENST00000562357 GABBR2O75899 941 aa18.56■□□□□ 0.56
CMTM3-204ENST00000562357 CHRM1P11229 460 aaPredicted RBP18.56■□□□□ 0.56
CMTM3-204ENST00000562357 HNRNPLP14866 589 aaKnown RBP eCLIP18.56■□□□□ 0.56
CMTM3-204ENST00000562357 TGM1P22735 817 aa18.56■□□□□ 0.56
CMTM3-204ENST00000562357 MPLP40238 635 aa18.56■□□□□ 0.56
CMTM3-204ENST00000562357 FOXK2Q01167 660 aa18.56■□□□□ 0.56
CMTM3-204ENST00000562357 APBA1Q02410 837 aa18.56■□□□□ 0.56
CMTM3-204ENST00000562357 CREB5Q02930 508 aa18.56■□□□□ 0.56
CMTM3-204ENST00000562357 RAPGEF1Q13905 1077 aa18.56■□□□□ 0.56
CMTM3-204ENST00000562357 BEND5Q7L4P6 421 aa18.56■□□□□ 0.56
CMTM3-204ENST00000562357 DGLUCYQ7Z3D6 616 aa18.56■□□□□ 0.56
CMTM3-204ENST00000562357 ZNF557Q8N988 423 aaPredicted RBP18.56■□□□□ 0.56
CMTM3-204ENST00000562357 ANKRD20A12PQ8NF67 263 aa18.56■□□□□ 0.56
CMTM3-204ENST00000562357 ENOX1Q8TC92 643 aaKnown RBP18.56■□□□□ 0.56
CMTM3-204ENST00000562357 DQX1Q8TE96 717 aaKnown RBP18.56■□□□□ 0.56
CMTM3-204ENST00000562357 IPO4Q8TEX9 1081 aaKnown RBP18.56■□□□□ 0.56
CMTM3-204ENST00000562357 IRX2Q9BZI1 471 aaPredicted RBP18.56■□□□□ 0.56
CMTM3-204ENST00000562357 DUSP15Q9H1R2 295 aaPredicted RBP18.56■□□□□ 0.56
CMTM3-204ENST00000562357 SYNCQ9H7C4 482 aa18.56■□□□□ 0.56
CMTM3-204ENST00000562357 POPDC2Q9HBU9 364 aa18.56■□□□□ 0.56
CMTM3-204ENST00000562357 ACP6Q9NPH0 428 aa18.56■□□□□ 0.56
CMTM3-204ENST00000562357 SAMSN1Q9NSI8 373 aaKnown RBP18.56■□□□□ 0.56
CMTM3-204ENST00000562357 STOML2Q9UJZ1 356 aa18.56■□□□□ 0.56
CMTM3-204ENST00000562357 SPTBN4Q9H254 2564 aa18.55■□□□□ 0.56
CMTM3-204ENST00000562357 IRAK2O43187 625 aa18.55■□□□□ 0.56
CMTM3-204ENST00000562357 TIMM44O43615 452 aa18.55■□□□□ 0.56
CMTM3-204ENST00000562357 APOEP02649 317 aa18.55■□□□□ 0.56
CMTM3-204ENST00000562357 YWHAZP63104 245 aaKnown RBP18.55■□□□□ 0.56
CMTM3-204ENST00000562357 NNTQ13423 1086 aa18.55■□□□□ 0.56
CMTM3-204ENST00000562357 AASDHQ4L235 1098 aaPredicted RBP18.55■□□□□ 0.56
CMTM3-204ENST00000562357 MIIPQ5JXC2 388 aa18.55■□□□□ 0.56
CMTM3-204ENST00000562357 LPCAT2Q7L5N7 544 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms