RNA–Protein interactions for RNA: ENST00000562310.1

COMMD4-205, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-205ENST00000562310 TTI1O43156 1089 aa14.82□□□□□ -0.04
COMMD4-205ENST00000562310 LIASO43766 372 aa14.82□□□□□ -0.04
COMMD4-205ENST00000562310 CXCL14O95715 111 aa14.82□□□□□ -0.04
COMMD4-205ENST00000562310 CCR1P32246 355 aa14.82□□□□□ -0.04
COMMD4-205ENST00000562310 HTR7P34969 479 aa14.82□□□□□ -0.04
COMMD4-205ENST00000562310 CA8P35219 290 aa14.82□□□□□ -0.04
COMMD4-205ENST00000562310 PTGIRP43119 386 aa14.82□□□□□ -0.04
COMMD4-205ENST00000562310 MAGEA10P43363 369 aaPredicted RBP14.82□□□□□ -0.04
COMMD4-205ENST00000562310 PPP3CCP48454 512 aa14.82□□□□□ -0.04
COMMD4-205ENST00000562310 KPNA1P52294 538 aaPredicted RBP14.82□□□□□ -0.04
COMMD4-205ENST00000562310 EPHB3P54753 998 aa14.82□□□□□ -0.04
COMMD4-205ENST00000562310 VCPP55072 806 aaKnown RBP14.82□□□□□ -0.04
COMMD4-205ENST00000562310 VSNL1P62760 191 aa14.82□□□□□ -0.04
COMMD4-205ENST00000562310 SLC7A5Q01650 507 aa14.82□□□□□ -0.04
COMMD4-205ENST00000562310 GUCY2DQ02846 1103 aa14.82□□□□□ -0.04
COMMD4-205ENST00000562310 EIF4EBP2Q13542 120 aaPredicted RBP14.82□□□□□ -0.04
COMMD4-205ENST00000562310 TAF12Q16514 161 aa14.82□□□□□ -0.04
COMMD4-205ENST00000562310 CA9Q16790 459 aa14.82□□□□□ -0.04
COMMD4-205ENST00000562310 SLC9A4Q6AI14 798 aa14.82□□□□□ -0.04
COMMD4-205ENST00000562310 TTC27Q6P3X3 843 aa14.82□□□□□ -0.04
COMMD4-205ENST00000562310 FBXO38Q6PIJ6 1188 aa14.82□□□□□ -0.04
COMMD4-205ENST00000562310 CCDC149Q6ZUS6 474 aa14.82□□□□□ -0.04
COMMD4-205ENST00000562310 ITIH5Q86UX2 942 aa14.82□□□□□ -0.04
COMMD4-205ENST00000562310 ATL2Q8NHH9 583 aa14.82□□□□□ -0.04
COMMD4-205ENST00000562310 CCHCR1Q8TD31 782 aa14.82□□□□□ -0.04
COMMD4-205ENST00000562310 GPR152Q8TDT2 470 aa14.82□□□□□ -0.04
COMMD4-205ENST00000562310 GIPC2Q8TF65 315 aa14.82□□□□□ -0.04
COMMD4-205ENST00000562310 HDAC7Q8WUI4 952 aa14.82□□□□□ -0.04
COMMD4-205ENST00000562310 HNRNPLLQ8WVV9 542 aaKnown RBP14.82□□□□□ -0.04
COMMD4-205ENST00000562310 ATG4AQ8WYN0 398 aa14.82□□□□□ -0.04
COMMD4-205ENST00000562310 RNF34Q969K3 372 aa14.82□□□□□ -0.04
COMMD4-205ENST00000562310 MYRFLQ96LU7 910 aa14.82□□□□□ -0.04
COMMD4-205ENST00000562310 TCF25Q9BQ70 676 aa14.82□□□□□ -0.04
COMMD4-205ENST00000562310 GDF3Q9NR23 364 aa14.82□□□□□ -0.04
COMMD4-205ENST00000562310 TLR9Q9NR96 1032 aa14.82□□□□□ -0.04
COMMD4-205ENST00000562310 FAM114A2Q9NRY5 505 aa14.82□□□□□ -0.04
COMMD4-205ENST00000562310 MTMR10Q9NXD2 777 aa14.82□□□□□ -0.04
COMMD4-205ENST00000562310 ARHGEF38Q9NXL2 777 aa14.82□□□□□ -0.04
COMMD4-205ENST00000562310 DRG1Q9Y295 367 aaKnown RBP14.82□□□□□ -0.04
COMMD4-205ENST00000562310 TLR6Q9Y2C9 796 aa14.82□□□□□ -0.04
COMMD4-205ENST00000562310 R3HDM2Q9Y2K5 976 aaKnown RBP14.82□□□□□ -0.04
COMMD4-205ENST00000562310 ASB3Q9Y575 518 aa14.82□□□□□ -0.04
COMMD4-205ENST00000562310 PCDHA11Q9Y5I1 949 aa14.82□□□□□ -0.04
COMMD4-205ENST00000562310 MTCL1Q9Y4B5 1905 aaKnown RBP14.82□□□□□ -0.04
COMMD4-205ENST00000562310 BHMG1C9JSJ3 638 aaPredicted RBP14.81□□□□□ -0.04
COMMD4-205ENST00000562310 MCF2LO15068 1137 aa14.81□□□□□ -0.04
COMMD4-205ENST00000562310 ZNF189O75820 626 aaPredicted RBP14.81□□□□□ -0.04
COMMD4-205ENST00000562310 CNPP09543 421 aaKnown RBP14.81□□□□□ -0.04
COMMD4-205ENST00000562310 RARGP13631 454 aa14.81□□□□□ -0.04
COMMD4-205ENST00000562310 HCAR3P49019 387 aa14.81□□□□□ -0.04
COMMD4-205ENST00000562310 DYNLT1P63172 113 aa14.81□□□□□ -0.04
COMMD4-205ENST00000562310 ADCY2Q08462 1091 aa14.81□□□□□ -0.04
COMMD4-205ENST00000562310 MMRN1Q13201 1228 aa14.81□□□□□ -0.04
COMMD4-205ENST00000562310 MTMR3Q13615 1198 aa14.81□□□□□ -0.04
COMMD4-205ENST00000562310 BYSLQ13895 437 aaKnown RBP14.81□□□□□ -0.04
COMMD4-205ENST00000562310 ACBD5Q5T8D3 534 aaPredicted RBP14.81□□□□□ -0.04
COMMD4-205ENST00000562310 SNX30Q5VWJ9 437 aa14.81□□□□□ -0.04
COMMD4-205ENST00000562310 PDE12Q6L8Q7 609 aaKnown RBP14.81□□□□□ -0.04
COMMD4-205ENST00000562310 RTL10Q7L3V2 364 aa14.81□□□□□ -0.04
COMMD4-205ENST00000562310 STKLD1Q8NE28 680 aa14.81□□□□□ -0.04
COMMD4-205ENST00000562310 SLC35B2Q8TB61 432 aa14.81□□□□□ -0.04
COMMD4-205ENST00000562310 ACTL9Q8TC94 416 aa14.81□□□□□ -0.04
COMMD4-205ENST00000562310 SEC14L1Q92503 715 aa14.81□□□□□ -0.04
COMMD4-205ENST00000562310 CASP10Q92851 521 aa14.81□□□□□ -0.04
COMMD4-205ENST00000562310 CCDC114Q96M63 670 aa14.81□□□□□ -0.04
COMMD4-205ENST00000562310 KLHL5Q96PQ7 755 aa14.81□□□□□ -0.04
COMMD4-205ENST00000562310 CSPG4P5Q96PW8 444 aa14.81□□□□□ -0.04
COMMD4-205ENST00000562310 HAPLN3Q96S86 360 aa14.81□□□□□ -0.04
COMMD4-205ENST00000562310 EPAS1Q99814 870 aa14.81□□□□□ -0.04
COMMD4-205ENST00000562310 ERP44Q9BS26 406 aa14.81□□□□□ -0.04
COMMD4-205ENST00000562310 FAM129AQ9BZQ8 928 aa14.81□□□□□ -0.04
COMMD4-205ENST00000562310 EPB41L5Q9HCM4 733 aa14.81□□□□□ -0.04
COMMD4-205ENST00000562310 OSER1Q9NX31 292 aa14.81□□□□□ -0.04
COMMD4-205ENST00000562310 MAGED2Q9UNF1 606 aaPredicted RBP14.81□□□□□ -0.04
COMMD4-205ENST00000562310 OBSL1O75147 1896 aa14.8□□□□□ -0.04
COMMD4-205ENST00000562310 EEF2KO00418 725 aaKnown RBP14.8□□□□□ -0.04
COMMD4-205ENST00000562310 APOEP02649 317 aa14.8□□□□□ -0.04
COMMD4-205ENST00000562310 ITGAVP06756 1048 aa14.8□□□□□ -0.04
COMMD4-205ENST00000562310 HMGA1P17096 107 aaKnown RBP14.8□□□□□ -0.04
COMMD4-205ENST00000562310 IL4RP24394 825 aa14.8□□□□□ -0.04
COMMD4-205ENST00000562310 NR2C2P49116 596 aa14.8□□□□□ -0.04
COMMD4-205ENST00000562310 TUBP50607 506 aa14.8□□□□□ -0.04
COMMD4-205ENST00000562310 DRG2P55039 364 aaKnown RBP14.8□□□□□ -0.04
COMMD4-205ENST00000562310 OTUD4Q01804 1114 aaKnown RBP14.8□□□□□ -0.04
COMMD4-205ENST00000562310 RING1Q06587 406 aa14.8□□□□□ -0.04
COMMD4-205ENST00000562310 TWF1Q12792 350 aa14.8□□□□□ -0.04
COMMD4-205ENST00000562310 SEMA3BQ13214 749 aa14.8□□□□□ -0.04
COMMD4-205ENST00000562310 SNX1Q13596 522 aa14.8□□□□□ -0.04
COMMD4-205ENST00000562310 PTK6Q13882 451 aa14.8□□□□□ -0.04
COMMD4-205ENST00000562310 NOMO1Q15155 1222 aa14.8□□□□□ -0.04
COMMD4-205ENST00000562310 PPP1R7Q15435 360 aa14.8□□□□□ -0.04
COMMD4-205ENST00000562310 TRIP4Q15650 581 aaPredicted RBP14.8□□□□□ -0.04
COMMD4-205ENST00000562310 C10orf120Q5SQS8 335 aa14.8□□□□□ -0.04
COMMD4-205ENST00000562310 C9orf50Q5SZB4 431 aa14.8□□□□□ -0.04
COMMD4-205ENST00000562310 KLHDC10Q6PID8 442 aa14.8□□□□□ -0.04
COMMD4-205ENST00000562310 TMCO3Q6UWJ1 677 aa14.8□□□□□ -0.04
COMMD4-205ENST00000562310 BZW1Q7L1Q6 419 aaKnown RBP14.8□□□□□ -0.04
COMMD4-205ENST00000562310 PQLC3Q8N755 202 aa14.8□□□□□ -0.04
COMMD4-205ENST00000562310 PCDH19Q8TAB3 1148 aa14.8□□□□□ -0.04
COMMD4-205ENST00000562310 SPPL3Q8TCT6 385 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms