RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 EBF3Q9H4W6 596 aa13.99□□□□□ -0.17
CDH1-204ENST00000562118 SYNCQ9H7C4 482 aa13.99□□□□□ -0.17
CDH1-204ENST00000562118 HEBP1Q9NRV9 189 aa13.99□□□□□ -0.17
CDH1-204ENST00000562118 SH3BP1Q9Y3L3 701 aa13.99□□□□□ -0.17
CDH1-204ENST00000562118 WDFY4Q6ZS81 3184 aa13.99□□□□□ -0.17
CDH1-204ENST00000562118 DOCK4Q8N1I0 1966 aa13.98□□□□□ -0.17
CDH1-204ENST00000562118 SIGLEC16A6NMB1 481 aa13.98□□□□□ -0.17
CDH1-204ENST00000562118 PRR33A8MZF0 331 aa13.98□□□□□ -0.17
CDH1-204ENST00000562118 AKR1B15C9JRZ8 316 aaPredicted RBP13.98□□□□□ -0.17
CDH1-204ENST00000562118 SPECC1L-ADORA2AF8WAN1 911 aa13.98□□□□□ -0.17
CDH1-204ENST00000562118 PENKP01210 267 aaPredicted RBP13.98□□□□□ -0.17
CDH1-204ENST00000562118 CORO1AP31146 461 aaKnown RBP13.98□□□□□ -0.17
CDH1-204ENST00000562118 GJA4P35212 333 aa13.98□□□□□ -0.17
CDH1-204ENST00000562118 PTPN9P43378 593 aa13.98□□□□□ -0.17
CDH1-204ENST00000562118 IFNAR2P48551 515 aa13.98□□□□□ -0.17
CDH1-204ENST00000562118 ADKP55263 362 aaKnown RBP13.98□□□□□ -0.17
CDH1-204ENST00000562118 PPP2R5DQ14738 602 aa13.98□□□□□ -0.17
CDH1-204ENST00000562118 DHCR24Q15392 516 aa13.98□□□□□ -0.17
CDH1-204ENST00000562118 SLC18A3Q16572 532 aa13.98□□□□□ -0.17
CDH1-204ENST00000562118 SLC25A52Q3SY17 297 aa13.98□□□□□ -0.17
CDH1-204ENST00000562118 DCAF6Q58WW2 860 aa13.98□□□□□ -0.17
CDH1-204ENST00000562118 TXNDC11Q6PKC3 985 aa13.98□□□□□ -0.17
CDH1-204ENST00000562118 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.98□□□□□ -0.17
CDH1-204ENST00000562118 SIX5Q8N196 739 aa13.98□□□□□ -0.17
CDH1-204ENST00000562118 PHTF2Q8N3S3 785 aa13.98□□□□□ -0.17
CDH1-204ENST00000562118 CPA6Q8N4T0 437 aa13.98□□□□□ -0.17
CDH1-204ENST00000562118 C1QTNF1Q9BXJ1 281 aa13.98□□□□□ -0.17
CDH1-204ENST00000562118 SPHK2Q9NRA0 654 aa13.98□□□□□ -0.17
CDH1-204ENST00000562118 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.98□□□□□ -0.17
CDH1-204ENST00000562118 DLGAP2Q9P1A6 1054 aa13.98□□□□□ -0.17
CDH1-204ENST00000562118 ADAMTS1Q9UHI8 967 aa13.98□□□□□ -0.17
CDH1-204ENST00000562118 LSM7Q9UK45 103 aaKnown RBP13.98□□□□□ -0.17
CDH1-204ENST00000562118 FBXO10Q9UK96 956 aa13.98□□□□□ -0.17
CDH1-204ENST00000562118 PIAS3Q9Y6X2 628 aa13.98□□□□□ -0.17
CDH1-204ENST00000562118 MUC22E2RYF6 1773 aaPredicted RBP13.97□□□□□ -0.17
CDH1-204ENST00000562118 A0A0A0MRY4 1105 aa13.97□□□□□ -0.17
CDH1-204ENST00000562118 MAN2B1O00754 1011 aa13.97□□□□□ -0.17
CDH1-204ENST00000562118 TRDMT1O14717 391 aaKnown RBP13.97□□□□□ -0.17
CDH1-204ENST00000562118 CAPN9O14815 690 aa13.97□□□□□ -0.17
CDH1-204ENST00000562118 GRAP2O75791 330 aa13.97□□□□□ -0.17
CDH1-204ENST00000562118 TPM1P09493 284 aa13.97□□□□□ -0.17
CDH1-204ENST00000562118 MYBL1P10243 752 aa13.97□□□□□ -0.17
CDH1-204ENST00000562118 TFE3P19532 575 aaPredicted RBP13.97□□□□□ -0.17
CDH1-204ENST00000562118 RRM1P23921 792 aa13.97□□□□□ -0.17
CDH1-204ENST00000562118 CXCR3P49682 368 aa13.97□□□□□ -0.17
CDH1-204ENST00000562118 TBX4P57082 545 aa13.97□□□□□ -0.17
CDH1-204ENST00000562118 MTA1Q13330 715 aa13.97□□□□□ -0.17
CDH1-204ENST00000562118 MAMLD1Q13495 774 aa13.97□□□□□ -0.17
CDH1-204ENST00000562118 TDRD12Q587J7 1177 aaKnown RBP13.97□□□□□ -0.17
CDH1-204ENST00000562118 FAM133BQ5BKY9 247 aaKnown RBP13.97□□□□□ -0.17
CDH1-204ENST00000562118 UNC45BQ8IWX7 931 aa13.97□□□□□ -0.17
CDH1-204ENST00000562118 JOSD2Q8TAC2 188 aa13.97□□□□□ -0.17
CDH1-204ENST00000562118 CSGALNACT1Q8TDX6 532 aa13.97□□□□□ -0.17
CDH1-204ENST00000562118 FNIP1Q8TF40 1166 aa13.97□□□□□ -0.17
CDH1-204ENST00000562118 CLDN23Q96B33 292 aa13.97□□□□□ -0.17
CDH1-204ENST00000562118 TRIM11Q96F44 468 aa13.97□□□□□ -0.17
CDH1-204ENST00000562118 SHDQ96IW2 340 aa13.97□□□□□ -0.17
CDH1-204ENST00000562118 PANX2Q96RD6 677 aa13.97□□□□□ -0.17
CDH1-204ENST00000562118 PRMT1Q99873 361 aaKnown RBP13.97□□□□□ -0.17
CDH1-204ENST00000562118 METTL5Q9NRN9 209 aaKnown RBP13.97□□□□□ -0.17
CDH1-204ENST00000562118 ARHGEF38Q9NXL2 777 aa13.97□□□□□ -0.17
CDH1-204ENST00000562118 IMPACTQ9P2X3 320 aa13.97□□□□□ -0.17
CDH1-204ENST00000562118 CHD5Q8TDI0 1954 aa13.96□□□□□ -0.17
CDH1-204ENST00000562118 KANSL1LA0AUZ9 987 aa13.96□□□□□ -0.17
CDH1-204ENST00000562118 I6L893 689 aaPredicted RBP13.96□□□□□ -0.17
CDH1-204ENST00000562118 CACNG3O60359 315 aa13.96□□□□□ -0.17
CDH1-204ENST00000562118 LCA5LO95447 670 aa13.96□□□□□ -0.17
CDH1-204ENST00000562118 PDGFBP01127 241 aaPredicted RBP13.96□□□□□ -0.17
CDH1-204ENST00000562118 FTLP02792 175 aaPredicted RBP13.96□□□□□ -0.17
CDH1-204ENST00000562118 IRF1P10914 325 aa13.96□□□□□ -0.17
CDH1-204ENST00000562118 CHKAP35790 457 aa13.96□□□□□ -0.17
CDH1-204ENST00000562118 EIF4A3P38919 411 aaKnown RBP13.96□□□□□ -0.17
CDH1-204ENST00000562118 OPRD1P41143 372 aa13.96□□□□□ -0.17
CDH1-204ENST00000562118 HARS2P49590 506 aaKnown RBP13.96□□□□□ -0.17
CDH1-204ENST00000562118 CLCN5P51795 746 aa13.96□□□□□ -0.17
CDH1-204ENST00000562118 CCINQ13939 588 aa13.96□□□□□ -0.17
CDH1-204ENST00000562118 CCDC14Q49A88 953 aa13.96□□□□□ -0.17
CDH1-204ENST00000562118 C5orf22Q49AR2 442 aa13.96□□□□□ -0.17
CDH1-204ENST00000562118 TMEM196Q5HYL7 178 aa13.96□□□□□ -0.17
CDH1-204ENST00000562118 BRMS1LQ5PSV4 323 aa13.96□□□□□ -0.17
CDH1-204ENST00000562118 LY6G5CQ5SRR4 150 aa13.96□□□□□ -0.17
CDH1-204ENST00000562118 ADGRF1Q5T601 910 aa13.96□□□□□ -0.17
CDH1-204ENST00000562118 FYB2Q5VWT5 728 aa13.96□□□□□ -0.17
CDH1-204ENST00000562118 NADSYN1Q6IA69 706 aa13.96□□□□□ -0.17
CDH1-204ENST00000562118 TPRG1Q6ZUI0 275 aa13.96□□□□□ -0.17
CDH1-204ENST00000562118 STRADAQ7RTN6 431 aa13.96□□□□□ -0.17
CDH1-204ENST00000562118 VPS36Q86VN1 386 aa13.96□□□□□ -0.17
CDH1-204ENST00000562118 CCDC105Q8IYK2 499 aa13.96□□□□□ -0.17
CDH1-204ENST00000562118 PJA1Q8NG27 643 aa13.96□□□□□ -0.17
CDH1-204ENST00000562118 ADAM32Q8TC27 787 aa13.96□□□□□ -0.17
CDH1-204ENST00000562118 CHP1Q99653 195 aa13.96□□□□□ -0.17
CDH1-204ENST00000562118 TBC1D17Q9HA65 648 aa13.96□□□□□ -0.17
CDH1-204ENST00000562118 LTB4R2Q9NPC1 389 aa13.96□□□□□ -0.17
CDH1-204ENST00000562118 PIGVQ9NUD9 493 aa13.96□□□□□ -0.17
CDH1-204ENST00000562118 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.96□□□□□ -0.17
CDH1-204ENST00000562118 FBXL21Q9UKT6 434 aa13.96□□□□□ -0.17
CDH1-204ENST00000562118 CA14Q9ULX7 337 aa13.96□□□□□ -0.17
CDH1-204ENST00000562118 STAP1Q9ULZ2 295 aa13.96□□□□□ -0.17
CDH1-204ENST00000562118 ACSL4O60488 711 aa13.95□□□□□ -0.18
CDH1-204ENST00000562118 ADCY5O95622 1261 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms