RNA–Protein interactions for RNA: ENST00000562045.1

SYNGR3-202, Transcript of synaptogyrin 3, humanhuman

TSL 2 BASIC

Gene SYNGR3, Length 1,743 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-202ENST00000562045 YJEFN3A6XGL0 299 aa23.4■■□□□ 1.34
SYNGR3-202ENST00000562045 E7ENQ6 273 aa23.4■■□□□ 1.34
SYNGR3-202ENST00000562045 GRAP2O75791 330 aa23.4■■□□□ 1.34
SYNGR3-202ENST00000562045 TBX18O95935 607 aa23.4■■□□□ 1.34
SYNGR3-202ENST00000562045 PDGFRAP16234 1089 aa23.4■■□□□ 1.34
SYNGR3-202ENST00000562045 FLT3P36888 993 aa23.4■■□□□ 1.34
SYNGR3-202ENST00000562045 DNA2P51530 1060 aa23.4■■□□□ 1.34
SYNGR3-202ENST00000562045 ZNF143P52747 638 aaPredicted RBP23.4■■□□□ 1.34
SYNGR3-202ENST00000562045 DAOAP59103 153 aa23.4■■□□□ 1.34
SYNGR3-202ENST00000562045 TAF5Q15542 800 aa23.4■■□□□ 1.34
SYNGR3-202ENST00000562045 PDZD8Q8NEN9 1154 aa23.4■■□□□ 1.34
SYNGR3-202ENST00000562045 USP13Q92995 863 aaPredicted RBP23.4■■□□□ 1.34
SYNGR3-202ENST00000562045 KCNK3O14649 394 aa23.39■■□□□ 1.34
SYNGR3-202ENST00000562045 COCHO43405 550 aa23.39■■□□□ 1.34
SYNGR3-202ENST00000562045 CTNNA2P26232 953 aa23.39■■□□□ 1.34
SYNGR3-202ENST00000562045 CTNNA1P35221 906 aaKnown RBP23.39■■□□□ 1.34
SYNGR3-202ENST00000562045 PPP3CCP48454 512 aa23.39■■□□□ 1.34
SYNGR3-202ENST00000562045 RXFP2Q8WXD0 754 aa23.39■■□□□ 1.34
SYNGR3-202ENST00000562045 IRGQQ8WZA9 623 aa23.39■■□□□ 1.34
SYNGR3-202ENST00000562045 FAM149B1Q96BN6 582 aa23.39■■□□□ 1.34
SYNGR3-202ENST00000562045 PSMB7Q99436 277 aa23.39■■□□□ 1.34
SYNGR3-202ENST00000562045 CNPY3Q9BT09 278 aa23.39■■□□□ 1.34
SYNGR3-202ENST00000562045 TRPV4Q9HBA0 871 aa23.39■■□□□ 1.34
SYNGR3-202ENST00000562045 TLR8Q9NR97 1041 aaKnown RBP23.39■■□□□ 1.34
SYNGR3-202ENST00000562045 NARSO43776 548 aaKnown RBP23.39■■□□□ 1.33
SYNGR3-202ENST00000562045 OLFM2O95897 454 aa23.39■■□□□ 1.33
SYNGR3-202ENST00000562045 HDCP19113 662 aa23.39■■□□□ 1.33
SYNGR3-202ENST00000562045 DDX6P26196 483 aaKnown RBP eCLIP23.39■■□□□ 1.33
SYNGR3-202ENST00000562045 SDC4P31431 198 aa23.39■■□□□ 1.33
SYNGR3-202ENST00000562045 YWHAZP63104 245 aaKnown RBP23.39■■□□□ 1.33
SYNGR3-202ENST00000562045 VITQ6UXI7 678 aa23.39■■□□□ 1.33
SYNGR3-202ENST00000562045 CPNE8Q86YQ8 564 aa23.39■■□□□ 1.33
SYNGR3-202ENST00000562045 SLC44A3Q8N4M1 653 aa23.39■■□□□ 1.33
SYNGR3-202ENST00000562045 CES2O00748 559 aa23.38■■□□□ 1.33
SYNGR3-202ENST00000562045 DPYSL4O14531 572 aa23.38■■□□□ 1.33
SYNGR3-202ENST00000562045 MDM4O15151 490 aa23.38■■□□□ 1.33
SYNGR3-202ENST00000562045 DDX3YO15523 660 aaKnown RBP23.38■■□□□ 1.33
SYNGR3-202ENST00000562045 SRGAP2O75044 1071 aa23.38■■□□□ 1.33
SYNGR3-202ENST00000562045 CKMP06732 381 aa23.38■■□□□ 1.33
SYNGR3-202ENST00000562045 AVPR1AP37288 418 aa23.38■■□□□ 1.33
SYNGR3-202ENST00000562045 WHAMMP3Q1A5X7 153 aa23.38■■□□□ 1.33
SYNGR3-202ENST00000562045 PBKQ96KB5 322 aa23.38■■□□□ 1.33
SYNGR3-202ENST00000562045 ZFP14Q9HCL3 533 aa23.38■■□□□ 1.33
SYNGR3-202ENST00000562045 MTPAPQ9NVV4 582 aaKnown RBP eCLIP23.38■■□□□ 1.33
SYNGR3-202ENST00000562045 SBDSQ9Y3A5 250 aaKnown RBP eCLIP23.38■■□□□ 1.33
SYNGR3-202ENST00000562045 PCDHA3Q9Y5H8 950 aa23.38■■□□□ 1.33
SYNGR3-202ENST00000562045 TRAV19A0A0A6YYK7 116 aa23.37■■□□□ 1.33
SYNGR3-202ENST00000562045 TLR5O60602 858 aa23.37■■□□□ 1.33
SYNGR3-202ENST00000562045 DAB1O75553 588 aa23.37■■□□□ 1.33
SYNGR3-202ENST00000562045 RNF8O76064 485 aa23.37■■□□□ 1.33
SYNGR3-202ENST00000562045 RARGP13631 454 aa23.37■■□□□ 1.33
SYNGR3-202ENST00000562045 CXCR5P32302 372 aa23.37■■□□□ 1.33
SYNGR3-202ENST00000562045 YWHAGP61981 247 aaKnown RBP eCLIP23.37■■□□□ 1.33
SYNGR3-202ENST00000562045 GRM2Q14416 872 aa23.37■■□□□ 1.33
SYNGR3-202ENST00000562045 HECTD3Q5T447 861 aa23.37■■□□□ 1.33
SYNGR3-202ENST00000562045 TRNP1Q6NT89 227 aa23.37■■□□□ 1.33
SYNGR3-202ENST00000562045 CC2D1AQ6P1N0 951 aaPredicted RBP23.37■■□□□ 1.33
SYNGR3-202ENST00000562045 MTSS1LQ765P7 747 aa23.37■■□□□ 1.33
SYNGR3-202ENST00000562045 RHOT1Q8IXI2 618 aa23.37■■□□□ 1.33
SYNGR3-202ENST00000562045 GOLGA1Q92805 767 aa23.37■■□□□ 1.33
SYNGR3-202ENST00000562045 ELSPBP1Q96BH3 223 aa23.37■■□□□ 1.33
SYNGR3-202ENST00000562045 CARD9Q9H257 536 aa23.37■■□□□ 1.33
SYNGR3-202ENST00000562045 POPDC2Q9HBU9 364 aa23.37■■□□□ 1.33
SYNGR3-202ENST00000562045 SMPD4Q9NXE4 827 aa23.37■■□□□ 1.33
SYNGR3-202ENST00000562045 KIF26AQ9ULI4 1882 aaPredicted RBP23.37■■□□□ 1.33
SYNGR3-202ENST00000562045 HEPACAM2A8MVW5 462 aa23.36■■□□□ 1.33
SYNGR3-202ENST00000562045 PSTPIP1O43586 416 aa23.36■■□□□ 1.33
SYNGR3-202ENST00000562045 ECI2O75521 394 aa23.36■■□□□ 1.33
SYNGR3-202ENST00000562045 WEE1P30291 646 aa23.36■■□□□ 1.33
SYNGR3-202ENST00000562045 MATKP42679 507 aa23.36■■□□□ 1.33
SYNGR3-202ENST00000562045 SSR1P43307 286 aaKnown RBP23.36■■□□□ 1.33
SYNGR3-202ENST00000562045 PTPN9P43378 593 aa23.36■■□□□ 1.33
SYNGR3-202ENST00000562045 EDEM1Q92611 657 aa23.36■■□□□ 1.33
SYNGR3-202ENST00000562045 KRT35Q92764 455 aa23.36■■□□□ 1.33
SYNGR3-202ENST00000562045 ZFRQ96KR1 1074 aaKnown RBP23.36■■□□□ 1.33
SYNGR3-202ENST00000562045 CFAP57Q96MR6 1250 aa23.36■■□□□ 1.33
SYNGR3-202ENST00000562045 NCAPGQ9BPX3 1015 aa23.36■■□□□ 1.33
SYNGR3-202ENST00000562045 TRIM62Q9BVG3 475 aa23.36■■□□□ 1.33
SYNGR3-202ENST00000562045 TDP1Q9NUW8 608 aa23.36■■□□□ 1.33
SYNGR3-202ENST00000562045 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP23.36■■□□□ 1.33
SYNGR3-202ENST00000562045 IGSF9Q9P2J2 1179 aa23.36■■□□□ 1.33
SYNGR3-202ENST00000562045 SOBPA7XYQ1 873 aa23.36■■□□□ 1.33
SYNGR3-202ENST00000562045 CCDC14Q49A88 953 aa23.36■■□□□ 1.33
SYNGR3-202ENST00000562045 LRRC38Q5VT99 294 aa23.36■■□□□ 1.33
SYNGR3-202ENST00000562045 TTC16Q8NEE8 873 aa23.36■■□□□ 1.33
SYNGR3-202ENST00000562045 COG1Q8WTW3 980 aa23.36■■□□□ 1.33
SYNGR3-202ENST00000562045 DDX23Q9BUQ8 820 aaKnown RBP23.36■■□□□ 1.33
SYNGR3-202ENST00000562045 RNF14Q9UBS8 474 aa23.36■■□□□ 1.33
SYNGR3-202ENST00000562045 LRCH4O75427 683 aa23.35■■□□□ 1.33
SYNGR3-202ENST00000562045 LTFP02788 710 aa23.35■■□□□ 1.33
SYNGR3-202ENST00000562045 PCK1P35558 622 aa23.35■■□□□ 1.33
SYNGR3-202ENST00000562045 PEX5P50542 639 aa23.35■■□□□ 1.33
SYNGR3-202ENST00000562045 TUBP50607 506 aa23.35■■□□□ 1.33
SYNGR3-202ENST00000562045 RWDD2BP57060 319 aa23.35■■□□□ 1.33
SYNGR3-202ENST00000562045 DAB2IPQ5VWQ8 1189 aa23.35■■□□□ 1.33
SYNGR3-202ENST00000562045 BSPRYQ5W0U4 402 aa23.35■■□□□ 1.33
SYNGR3-202ENST00000562045 DEFB106AQ8N104 65 aa23.35■■□□□ 1.33
SYNGR3-202ENST00000562045 ALG3Q92685 438 aa23.35■■□□□ 1.33
SYNGR3-202ENST00000562045 WBP2Q969T9 261 aa23.35■■□□□ 1.33
SYNGR3-202ENST00000562045 SLC2A13Q96QE2 648 aa23.35■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms