RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 EFHC1Q5JVL4 640 aa6.81□□□□□ -1.32
CAPN3-210ENST00000561817 ARTNQ5T4W7 220 aa6.81□□□□□ -1.32
CAPN3-210ENST00000561817 PM20D1Q6GTS8 502 aa6.81□□□□□ -1.32
CAPN3-210ENST00000561817 OVOS1Q6IE37 1185 aa6.81□□□□□ -1.32
CAPN3-210ENST00000561817 HFE2Q6ZVN8 426 aa6.81□□□□□ -1.32
CAPN3-210ENST00000561817 SYDE1Q6ZW31 735 aaPredicted RBP6.81□□□□□ -1.32
CAPN3-210ENST00000561817 STRADAQ7RTN6 431 aa6.81□□□□□ -1.32
CAPN3-210ENST00000561817 DEFB106AQ8N104 65 aa6.81□□□□□ -1.32
CAPN3-210ENST00000561817 PQLC3Q8N755 202 aa6.81□□□□□ -1.32
CAPN3-210ENST00000561817 ATL2Q8NHH9 583 aa6.81□□□□□ -1.32
CAPN3-210ENST00000561817 URGCPQ8TCY9 931 aa6.81□□□□□ -1.32
CAPN3-210ENST00000561817 HASPINQ8TF76 798 aa6.81□□□□□ -1.32
CAPN3-210ENST00000561817 FAM172AQ8WUF8 416 aa6.81□□□□□ -1.32
CAPN3-210ENST00000561817 IFT81Q8WYA0 676 aa6.81□□□□□ -1.32
CAPN3-210ENST00000561817 ART4Q93070 314 aa6.81□□□□□ -1.32
CAPN3-210ENST00000561817 SMARCD1Q96GM5 515 aa6.81□□□□□ -1.32
CAPN3-210ENST00000561817 SCLYQ96I15 445 aa6.81□□□□□ -1.32
CAPN3-210ENST00000561817 GDAP1L1Q96MZ0 367 aa6.81□□□□□ -1.32
CAPN3-210ENST00000561817 KCNK16Q96T55 309 aa6.81□□□□□ -1.32
CAPN3-210ENST00000561817 TBCBQ99426 244 aa6.81□□□□□ -1.32
CAPN3-210ENST00000561817 NPY6RQ99463 290 aa6.81□□□□□ -1.32
CAPN3-210ENST00000561817 SH3GL2Q99962 352 aa6.81□□□□□ -1.32
CAPN3-210ENST00000561817 NCAPGQ9BPX3 1015 aa6.81□□□□□ -1.32
CAPN3-210ENST00000561817 SNRNP25Q9BV90 132 aaKnown RBP6.81□□□□□ -1.32
CAPN3-210ENST00000561817 ULBP1Q9BZM6 244 aa6.81□□□□□ -1.32
CAPN3-210ENST00000561817 ZCWPW1Q9H0M4 648 aa6.81□□□□□ -1.32
CAPN3-210ENST00000561817 RAB17Q9H0T7 212 aa6.81□□□□□ -1.32
CAPN3-210ENST00000561817 DPH5Q9H2P9 285 aa6.81□□□□□ -1.32
CAPN3-210ENST00000561817 EPB41L4BQ9H329 900 aa6.81□□□□□ -1.32
CAPN3-210ENST00000561817 HIPK3Q9H422 1215 aa6.81□□□□□ -1.32
CAPN3-210ENST00000561817 ZWILCHQ9H900 591 aa6.81□□□□□ -1.32
CAPN3-210ENST00000561817 PCDH18Q9HCL0 1135 aa6.81□□□□□ -1.32
CAPN3-210ENST00000561817 HOMER3Q9NSC5 361 aa6.81□□□□□ -1.32
CAPN3-210ENST00000561817 PCSK1NQ9UHG2 260 aa6.81□□□□□ -1.32
CAPN3-210ENST00000561817 DNPEPQ9ULA0 475 aa6.81□□□□□ -1.32
CAPN3-210ENST00000561817 DRG1Q9Y295 367 aaKnown RBP6.81□□□□□ -1.32
CAPN3-210ENST00000561817 SNX24Q9Y343 169 aa6.81□□□□□ -1.32
CAPN3-210ENST00000561817 NFS1Q9Y697 457 aa6.81□□□□□ -1.32
CAPN3-210ENST00000561817 MRPL42Q9Y6G3 142 aaKnown RBP6.81□□□□□ -1.32
CAPN3-210ENST00000561817 USP3Q9Y6I4 520 aa6.81□□□□□ -1.32
CAPN3-210ENST00000561817 ARHGEF37A1IGU5 675 aa6.8□□□□□ -1.32
CAPN3-210ENST00000561817 YJEFN3A6XGL0 299 aa6.8□□□□□ -1.32
CAPN3-210ENST00000561817 DCDC2CA8MYV0 355 aa6.8□□□□□ -1.32
CAPN3-210ENST00000561817 E7ENQ6 273 aa6.8□□□□□ -1.32
CAPN3-210ENST00000561817 I6L893 689 aaPredicted RBP6.8□□□□□ -1.32
CAPN3-210ENST00000561817 SYN3O14994 580 aa6.8□□□□□ -1.32
CAPN3-210ENST00000561817 DNAJC6O75061 913 aa6.8□□□□□ -1.32
CAPN3-210ENST00000561817 PPFIA2O75334 1257 aa6.8□□□□□ -1.32
CAPN3-210ENST00000561817 RNF8O76064 485 aa6.8□□□□□ -1.32
CAPN3-210ENST00000561817 FBXO21O94952 628 aa6.8□□□□□ -1.32
CAPN3-210ENST00000561817 TJP3O95049 919 aa6.8□□□□□ -1.32
CAPN3-210ENST00000561817 VNN2O95498 520 aa6.8□□□□□ -1.32
CAPN3-210ENST00000561817 ECEL1O95672 775 aa6.8□□□□□ -1.32
CAPN3-210ENST00000561817 SYF2O95926 243 aaKnown RBP6.8□□□□□ -1.32
CAPN3-210ENST00000561817 CLTBP09497 229 aa6.8□□□□□ -1.32
CAPN3-210ENST00000561817 PECAM1P16284 738 aaPredicted RBP6.8□□□□□ -1.32
CAPN3-210ENST00000561817 SDC4P31431 198 aa6.8□□□□□ -1.32
CAPN3-210ENST00000561817 L1CAMP32004 1257 aa6.8□□□□□ -1.32
CAPN3-210ENST00000561817 CYP2C18P33260 490 aa6.8□□□□□ -1.32
CAPN3-210ENST00000561817 NOS2P35228 1153 aa6.8□□□□□ -1.32
CAPN3-210ENST00000561817 SLC11A1P49279 550 aa6.8□□□□□ -1.32
CAPN3-210ENST00000561817 TKTL1P51854 596 aa6.8□□□□□ -1.32
CAPN3-210ENST00000561817 CDR1P51861 262 aa6.8□□□□□ -1.32
CAPN3-210ENST00000561817 VCPP55072 806 aaKnown RBP6.8□□□□□ -1.32
CAPN3-210ENST00000561817 CCL23P55773 120 aa6.8□□□□□ -1.32
CAPN3-210ENST00000561817 YWHAZP63104 245 aaKnown RBP6.8□□□□□ -1.32
CAPN3-210ENST00000561817 ATP11AP98196 1134 aa6.8□□□□□ -1.32
CAPN3-210ENST00000561817 PTSQ03393 145 aa6.8□□□□□ -1.32
CAPN3-210ENST00000561817 KRT17Q04695 432 aa6.8□□□□□ -1.32
CAPN3-210ENST00000561817 SMC1AQ14683 1233 aaKnown RBP6.8□□□□□ -1.32
CAPN3-210ENST00000561817 DPYSL2Q16555 572 aa6.8□□□□□ -1.32
CAPN3-210ENST00000561817 SLC25A52Q3SY17 297 aa6.8□□□□□ -1.32
CAPN3-210ENST00000561817 ZC3H12AQ5D1E8 599 aaKnown RBP6.8□□□□□ -1.32
CAPN3-210ENST00000561817 SYPL2Q5VXT5 272 aa6.8□□□□□ -1.32
CAPN3-210ENST00000561817 KAZNQ674X7 775 aa6.8□□□□□ -1.32
CAPN3-210ENST00000561817 SLC9A4Q6AI14 798 aa6.8□□□□□ -1.32
CAPN3-210ENST00000561817 RINLQ6ZS11 566 aa6.8□□□□□ -1.32
CAPN3-210ENST00000561817 BEND5Q7L4P6 421 aa6.8□□□□□ -1.32
CAPN3-210ENST00000561817 TMC3Q7Z5M5 1100 aa6.8□□□□□ -1.32
CAPN3-210ENST00000561817 METTL23Q86XA0 190 aa6.8□□□□□ -1.32
CAPN3-210ENST00000561817 CCDC50Q8IVM0 306 aa6.8□□□□□ -1.32
CAPN3-210ENST00000561817 CCDC105Q8IYK2 499 aa6.8□□□□□ -1.32
CAPN3-210ENST00000561817 RNF168Q8IYW5 571 aaPredicted RBP6.8□□□□□ -1.32
CAPN3-210ENST00000561817 KRT222Q8N1A0 295 aa6.8□□□□□ -1.32
CAPN3-210ENST00000561817 ALLCQ8N6M5 410 aa6.8□□□□□ -1.32
CAPN3-210ENST00000561817 GLIS1Q8NBF1 620 aa6.8□□□□□ -1.32
CAPN3-210ENST00000561817 PCDH19Q8TAB3 1148 aa6.8□□□□□ -1.32
CAPN3-210ENST00000561817 FBXO25Q8TCJ0 367 aa6.8□□□□□ -1.32
CAPN3-210ENST00000561817 BCL7CQ8WUZ0 217 aaPredicted RBP6.8□□□□□ -1.32
CAPN3-210ENST00000561817 IRGQQ8WZA9 623 aa6.8□□□□□ -1.32
CAPN3-210ENST00000561817 PGAP3Q96FM1 320 aaPredicted RBP6.8□□□□□ -1.32
CAPN3-210ENST00000561817 RNF157Q96PX1 679 aa6.8□□□□□ -1.32
CAPN3-210ENST00000561817 FAM118BQ9BPY3 351 aa6.8□□□□□ -1.32
CAPN3-210ENST00000561817 TMEM175Q9BSA9 504 aa6.8□□□□□ -1.32
CAPN3-210ENST00000561817 MED10Q9BTT4 135 aa6.8□□□□□ -1.32
CAPN3-210ENST00000561817 FRMD8P1Q9BZ68 369 aaPredicted RBP6.8□□□□□ -1.32
CAPN3-210ENST00000561817 MAGEB5Q9BZ81 275 aa6.8□□□□□ -1.32
CAPN3-210ENST00000561817 GPR62Q9BZJ7 368 aa6.8□□□□□ -1.32
CAPN3-210ENST00000561817 FAM129AQ9BZQ8 928 aa6.8□□□□□ -1.32
CAPN3-210ENST00000561817 ADAM7Q9H2U9 754 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms