RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 BHMTQ93088 406 aa19.49■□□□□ 0.71
TPM1-226ENST00000560959 IGSF8Q969P0 613 aa19.49■□□□□ 0.71
TPM1-226ENST00000560959 C7orf25Q9BPX7 421 aa19.49■□□□□ 0.71
TPM1-226ENST00000560959 A0A1W2PQH9 124 aa19.48■□□□□ 0.71
TPM1-226ENST00000560959 PAPSS1O43252 624 aaPredicted RBP19.48■□□□□ 0.71
TPM1-226ENST00000560959 STX6O43752 255 aa19.48■□□□□ 0.71
TPM1-226ENST00000560959 DFNA5O60443 496 aa19.48■□□□□ 0.71
TPM1-226ENST00000560959 EXOC3O60645 756 aa19.48■□□□□ 0.71
TPM1-226ENST00000560959 ASIC1P78348 528 aa19.48■□□□□ 0.71
TPM1-226ENST00000560959 GPRIN1Q7Z2K8 1008 aa19.48■□□□□ 0.71
TPM1-226ENST00000560959 CCDC186Q7Z3E2 898 aa19.48■□□□□ 0.71
TPM1-226ENST00000560959 C12orf29Q8N999 325 aa19.48■□□□□ 0.71
TPM1-226ENST00000560959 LSM14AQ8ND56 463 aaKnown RBP19.48■□□□□ 0.71
TPM1-226ENST00000560959 OR2T3Q8NH03 318 aa19.48■□□□□ 0.71
TPM1-226ENST00000560959 GOLGA5Q8TBA6 731 aa19.48■□□□□ 0.71
TPM1-226ENST00000560959 TFIP11Q9UBB9 837 aaKnown RBP19.48■□□□□ 0.71
TPM1-226ENST00000560959 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.48■□□□□ 0.71
TPM1-226ENST00000560959 BTBD3Q9Y2F9 522 aa19.48■□□□□ 0.71
TPM1-226ENST00000560959 ANKRD6Q9Y2G4 727 aa19.48■□□□□ 0.71
TPM1-226ENST00000560959 FLNBO75369 2602 aaKnown RBP19.47■□□□□ 0.71
TPM1-226ENST00000560959 VNN1O95497 513 aa19.47■□□□□ 0.71
TPM1-226ENST00000560959 CYBBP04839 570 aa19.47■□□□□ 0.71
TPM1-226ENST00000560959 RALAP11233 206 aa19.47■□□□□ 0.71
TPM1-226ENST00000560959 CDK4P11802 303 aa19.47■□□□□ 0.71
TPM1-226ENST00000560959 ABCG1P45844 678 aa19.47■□□□□ 0.71
TPM1-226ENST00000560959 CASP4P49662 377 aa19.47■□□□□ 0.71
TPM1-226ENST00000560959 KIF11P52732 1056 aa19.47■□□□□ 0.71
TPM1-226ENST00000560959 PDE4CQ08493 712 aa19.47■□□□□ 0.71
TPM1-226ENST00000560959 CAMK2GQ13555 558 aaPredicted RBP19.47■□□□□ 0.71
TPM1-226ENST00000560959 KNOP1Q1ED39 458 aaKnown RBP19.47■□□□□ 0.71
TPM1-226ENST00000560959 SCARA5Q6ZMJ2 495 aa19.47■□□□□ 0.71
TPM1-226ENST00000560959 UNC13DQ70J99 1090 aa19.47■□□□□ 0.71
TPM1-226ENST00000560959 NELFCDQ8IXH7 590 aa19.47■□□□□ 0.71
TPM1-226ENST00000560959 CPXM2Q8N436 756 aa19.47■□□□□ 0.71
TPM1-226ENST00000560959 PLEKHO2Q8TD55 490 aa19.47■□□□□ 0.71
TPM1-226ENST00000560959 ZBTB32Q9Y2Y4 487 aaPredicted RBP19.47■□□□□ 0.71
TPM1-226ENST00000560959 SNX11Q9Y5W9 270 aa19.47■□□□□ 0.71
TPM1-226ENST00000560959 USP3Q9Y6I4 520 aa19.47■□□□□ 0.71
TPM1-226ENST00000560959 BPTFQ12830 3046 aa19.46■□□□□ 0.71
TPM1-226ENST00000560959 LRRIQ3A6PVS8 624 aaPredicted RBP19.46■□□□□ 0.71
TPM1-226ENST00000560959 MDM4O15151 490 aa19.46■□□□□ 0.71
TPM1-226ENST00000560959 EPHX1P07099 455 aa19.46■□□□□ 0.71
TPM1-226ENST00000560959 CCT8P50990 548 aa19.46■□□□□ 0.71
TPM1-226ENST00000560959 ZBTB16Q05516 673 aa19.46■□□□□ 0.71
TPM1-226ENST00000560959 CUL4AQ13619 759 aa19.46■□□□□ 0.71
TPM1-226ENST00000560959 INAVAQ3KP66 663 aa19.46■□□□□ 0.71
TPM1-226ENST00000560959 ZACNQ401N2 412 aa19.46■□□□□ 0.71
TPM1-226ENST00000560959 FAM173BQ6P4H8 233 aa19.46■□□□□ 0.71
TPM1-226ENST00000560959 SCD5Q86SK9 330 aa19.46■□□□□ 0.71
TPM1-226ENST00000560959 IQUBQ8NA54 791 aa19.46■□□□□ 0.71
TPM1-226ENST00000560959 CYFIP2Q96F07 1278 aa19.46■□□□□ 0.71
TPM1-226ENST00000560959 USP28Q96RU2 1077 aa19.46■□□□□ 0.71
TPM1-226ENST00000560959 FBRSQ9HAH7 460 aa19.46■□□□□ 0.71
TPM1-226ENST00000560959 FAM49BQ9NUQ9 324 aa19.46■□□□□ 0.71
TPM1-226ENST00000560959 NAGPAQ9UK23 515 aa19.46■□□□□ 0.71
TPM1-226ENST00000560959 NUDT5Q9UKK9 219 aa19.46■□□□□ 0.71
TPM1-226ENST00000560959 AGO1Q9UL18 857 aaKnown RBP19.46■□□□□ 0.71
TPM1-226ENST00000560959 PCDHGA1Q9Y5H4 931 aa19.46■□□□□ 0.71
TPM1-226ENST00000560959 ASH1LQ9NR48 2969 aaKnown RBP19.46■□□□□ 0.71
TPM1-226ENST00000560959 GOLGA8CPA6NN73 597 aa19.45■□□□□ 0.7
TPM1-226ENST00000560959 HLA-EP13747 358 aa19.45■□□□□ 0.7
TPM1-226ENST00000560959 PRKCHP24723 683 aa19.45■□□□□ 0.7
TPM1-226ENST00000560959 NASPP49321 788 aaPredicted RBP19.45■□□□□ 0.7
TPM1-226ENST00000560959 INCA1Q0VD86 236 aa19.45■□□□□ 0.7
TPM1-226ENST00000560959 SERPINA13PQ6UXR4 307 aa19.45■□□□□ 0.7
TPM1-226ENST00000560959 MARCH9Q86YJ5 346 aa19.45■□□□□ 0.7
TPM1-226ENST00000560959 FAM217AQ8IXS0 508 aa19.45■□□□□ 0.7
TPM1-226ENST00000560959 C6orf106Q9H6K1 298 aaPredicted RBP19.45■□□□□ 0.7
TPM1-226ENST00000560959 MAGEF1Q9HAY2 307 aa19.45■□□□□ 0.7
TPM1-226ENST00000560959 TM9SF3Q9HD45 589 aa19.45■□□□□ 0.7
TPM1-226ENST00000560959 HMGXB4Q9UGU5 601 aa19.45■□□□□ 0.7
TPM1-226ENST00000560959 CABIN1Q9Y6J0 2220 aa19.45■□□□□ 0.7
TPM1-226ENST00000560959 GOLGA4Q13439 2230 aaKnown RBP19.44■□□□□ 0.7
TPM1-226ENST00000560959 PVALEFA0A1B0GWK0 134 aa19.44■□□□□ 0.7
TPM1-226ENST00000560959 FAM149AA5PLN7 773 aa19.44■□□□□ 0.7
TPM1-226ENST00000560959 IKBKBO14920 756 aa19.44■□□□□ 0.7
TPM1-226ENST00000560959 TSPAN3O60637 253 aa19.44■□□□□ 0.7
TPM1-226ENST00000560959 CLSTN1O94985 981 aa19.44■□□□□ 0.7
TPM1-226ENST00000560959 ASS1P00966 412 aaKnown RBP19.44■□□□□ 0.7
TPM1-226ENST00000560959 CD27P26842 260 aa19.44■□□□□ 0.7
TPM1-226ENST00000560959 ADORA2BP29275 332 aa19.44■□□□□ 0.7
TPM1-226ENST00000560959 CORO1AP31146 461 aaKnown RBP19.44■□□□□ 0.7
TPM1-226ENST00000560959 ACSL1P33121 698 aa19.44■□□□□ 0.7
TPM1-226ENST00000560959 ASPAP45381 313 aa19.44■□□□□ 0.7
TPM1-226ENST00000560959 ARID5AQ03989 594 aa19.44■□□□□ 0.7
TPM1-226ENST00000560959 TMEM215Q68D42 235 aa19.44■□□□□ 0.7
TPM1-226ENST00000560959 SLC9A9Q8IVB4 645 aa19.44■□□□□ 0.7
TPM1-226ENST00000560959 SNX19Q92543 992 aa19.44■□□□□ 0.7
TPM1-226ENST00000560959 CIPCQ9C0C6 399 aa19.44■□□□□ 0.7
TPM1-226ENST00000560959 BTBD1Q9H0C5 482 aa19.44■□□□□ 0.7
TPM1-226ENST00000560959 LHX5Q9H2C1 402 aa19.44■□□□□ 0.7
TPM1-226ENST00000560959 TMEM245Q9H330 911 aa19.44■□□□□ 0.7
TPM1-226ENST00000560959 ZSCAN16Q9H4T2 348 aaPredicted RBP19.44■□□□□ 0.7
TPM1-226ENST00000560959 DMAC2Q9NW81 257 aa19.44■□□□□ 0.7
TPM1-226ENST00000560959 KNL1Q8NG31 2342 aa19.43■□□□□ 0.7
TPM1-226ENST00000560959 ATXN7O15265 892 aaPredicted RBP19.43■□□□□ 0.7
TPM1-226ENST00000560959 C1SP09871 688 aa19.43■□□□□ 0.7
TPM1-226ENST00000560959 SYT1P21579 422 aa19.43■□□□□ 0.7
TPM1-226ENST00000560959 CTSKP43235 329 aa19.43■□□□□ 0.7
TPM1-226ENST00000560959 FAM124AQ86V42 546 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms