RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 KLHL40Q2TBA0 621 aa13.52□□□□□ -0.25
CTDSPL2-209ENST00000560620 NUGGCQ68CJ6 796 aa13.52□□□□□ -0.25
CTDSPL2-209ENST00000560620 MSANTD2Q6P1R3 559 aa13.52□□□□□ -0.25
CTDSPL2-209ENST00000560620 TMEM110Q86TL2 294 aa13.52□□□□□ -0.25
CTDSPL2-209ENST00000560620 UNC45BQ8IWX7 931 aa13.52□□□□□ -0.25
CTDSPL2-209ENST00000560620 CAMKK1Q8N5S9 505 aa13.52□□□□□ -0.25
CTDSPL2-209ENST00000560620 ZNF513Q8N8E2 541 aaPredicted RBP13.52□□□□□ -0.25
CTDSPL2-209ENST00000560620 TXNDC5Q8NBS9 432 aaKnown RBP13.52□□□□□ -0.25
CTDSPL2-209ENST00000560620 TMEM35BQ8NCS4 154 aa13.52□□□□□ -0.25
CTDSPL2-209ENST00000560620 TSTD1Q8NFU3 115 aa13.52□□□□□ -0.25
CTDSPL2-209ENST00000560620 NELL1Q92832 810 aa13.52□□□□□ -0.25
CTDSPL2-209ENST00000560620 SERPINB11Q96P15 392 aa13.52□□□□□ -0.25
CTDSPL2-209ENST00000560620 CPXM1Q96SM3 734 aa13.52□□□□□ -0.25
CTDSPL2-209ENST00000560620 LHX5Q9H2C1 402 aa13.52□□□□□ -0.25
CTDSPL2-209ENST00000560620 TJP2Q9UDY2 1190 aa13.52□□□□□ -0.25
CTDSPL2-209ENST00000560620 MMP17Q9ULZ9 603 aa13.52□□□□□ -0.25
CTDSPL2-209ENST00000560620 SMG5Q9UPR3 1016 aaKnown RBP13.52□□□□□ -0.25
CTDSPL2-209ENST00000560620 USP34Q70CQ2 3546 aa13.51□□□□□ -0.25
CTDSPL2-209ENST00000560620 ZFHX2Q9C0A1 2572 aaPredicted RBP13.51□□□□□ -0.25
CTDSPL2-209ENST00000560620 FANCMQ8IYD8 2048 aa13.51□□□□□ -0.25
CTDSPL2-209ENST00000560620 KIAA1549LQ6ZVL6 1849 aa13.51□□□□□ -0.25
CTDSPL2-209ENST00000560620 SYNJ2BP-COX16A0A087WUM0 186 aa13.51□□□□□ -0.25
CTDSPL2-209ENST00000560620 SYCE3A1L190 88 aa13.51□□□□□ -0.25
CTDSPL2-209ENST00000560620 LGALS16A8MUM7 142 aa13.51□□□□□ -0.25
CTDSPL2-209ENST00000560620 LILRB5O75023 590 aa13.51□□□□□ -0.25
CTDSPL2-209ENST00000560620 GRAP2O75791 330 aa13.51□□□□□ -0.25
CTDSPL2-209ENST00000560620 APBB3O95704 486 aa13.51□□□□□ -0.25
CTDSPL2-209ENST00000560620 MOCS2O96007 188 aaPredicted RBP13.51□□□□□ -0.25
CTDSPL2-209ENST00000560620 ATP1A3P13637 1013 aa13.51□□□□□ -0.25
CTDSPL2-209ENST00000560620 RPL34P49207 117 aaKnown RBP13.51□□□□□ -0.25
CTDSPL2-209ENST00000560620 NCAPHQ15003 741 aa13.51□□□□□ -0.25
CTDSPL2-209ENST00000560620 MPPE1Q53F39 396 aa13.51□□□□□ -0.25
CTDSPL2-209ENST00000560620 DCAF6Q58WW2 860 aa13.51□□□□□ -0.25
CTDSPL2-209ENST00000560620 EFHC1Q5JVL4 640 aa13.51□□□□□ -0.25
CTDSPL2-209ENST00000560620 EOGTQ5NDL2 527 aa13.51□□□□□ -0.25
CTDSPL2-209ENST00000560620 ADGRF1Q5T601 910 aa13.51□□□□□ -0.25
CTDSPL2-209ENST00000560620 SYPL2Q5VXT5 272 aa13.51□□□□□ -0.25
CTDSPL2-209ENST00000560620 SMYD5Q6GMV2 418 aa13.51□□□□□ -0.25
CTDSPL2-209ENST00000560620 SDE2Q6IQ49 451 aa13.51□□□□□ -0.25
CTDSPL2-209ENST00000560620 DPY19L2P1Q6NXN4 242 aa13.51□□□□□ -0.25
CTDSPL2-209ENST00000560620 TOGARAM2Q6ZUX3 1019 aa13.51□□□□□ -0.25
CTDSPL2-209ENST00000560620 TRMT11Q7Z4G4 463 aaKnown RBP13.51□□□□□ -0.25
CTDSPL2-209ENST00000560620 WDR5BQ86VZ2 330 aa13.51□□□□□ -0.25
CTDSPL2-209ENST00000560620 PHTF2Q8N3S3 785 aa13.51□□□□□ -0.25
CTDSPL2-209ENST00000560620 CPXM2Q8N436 756 aa13.51□□□□□ -0.25
CTDSPL2-209ENST00000560620 WDTC1Q8N5D0 677 aa13.51□□□□□ -0.25
CTDSPL2-209ENST00000560620 IL17RCQ8NAC3 791 aa13.51□□□□□ -0.25
CTDSPL2-209ENST00000560620 DQX1Q8TE96 717 aaKnown RBP13.51□□□□□ -0.25
CTDSPL2-209ENST00000560620 RNF34Q969K3 372 aa13.51□□□□□ -0.25
CTDSPL2-209ENST00000560620 NAA15Q9BXJ9 866 aaKnown RBP13.51□□□□□ -0.25
CTDSPL2-209ENST00000560620 GANQ9H2C0 597 aa13.51□□□□□ -0.25
CTDSPL2-209ENST00000560620 EPC1Q9H2F5 836 aa13.51□□□□□ -0.25
CTDSPL2-209ENST00000560620 POLMQ9NP87 494 aaPredicted RBP13.51□□□□□ -0.25
CTDSPL2-209ENST00000560620 COX16Q9P0S2 106 aa13.51□□□□□ -0.25
CTDSPL2-209ENST00000560620 BCCIPQ9P287 314 aaKnown RBP eCLIP13.51□□□□□ -0.25
CTDSPL2-209ENST00000560620 A0A0A0MRY4 1105 aa13.5□□□□□ -0.25
CTDSPL2-209ENST00000560620 TYW5A2RUC4 315 aaKnown RBP13.5□□□□□ -0.25
CTDSPL2-209ENST00000560620 AXIN1O15169 862 aa13.5□□□□□ -0.25
CTDSPL2-209ENST00000560620 ALDH1A2O94788 518 aa13.5□□□□□ -0.25
CTDSPL2-209ENST00000560620 APOEP02649 317 aa13.5□□□□□ -0.25
CTDSPL2-209ENST00000560620 ERBB2P04626 1255 aa13.5□□□□□ -0.25
CTDSPL2-209ENST00000560620 FYNP06241 537 aa13.5□□□□□ -0.25
CTDSPL2-209ENST00000560620 HOXA6P31267 233 aa13.5□□□□□ -0.25
CTDSPL2-209ENST00000560620 CNR2P34972 360 aa13.5□□□□□ -0.25
CTDSPL2-209ENST00000560620 WASP42768 502 aa13.5□□□□□ -0.25
CTDSPL2-209ENST00000560620 KIR2DL1P43626 348 aaPredicted RBP13.5□□□□□ -0.25
CTDSPL2-209ENST00000560620 TPM4P67936 248 aa13.5□□□□□ -0.25
CTDSPL2-209ENST00000560620 ARID5AQ03989 594 aa13.5□□□□□ -0.25
CTDSPL2-209ENST00000560620 TAF5Q15542 800 aa13.5□□□□□ -0.25
CTDSPL2-209ENST00000560620 CRY1Q16526 586 aa13.5□□□□□ -0.25
CTDSPL2-209ENST00000560620 HSF5Q4G112 596 aaPredicted RBP13.5□□□□□ -0.25
CTDSPL2-209ENST00000560620 FILIP1LQ4L180 1135 aa13.5□□□□□ -0.25
CTDSPL2-209ENST00000560620 FYB2Q5VWT5 728 aa13.5□□□□□ -0.25
CTDSPL2-209ENST00000560620 ANO7Q6IWH7 933 aa13.5□□□□□ -0.25
CTDSPL2-209ENST00000560620 FAM183BPQ6ZVS7 135 aa13.5□□□□□ -0.25
CTDSPL2-209ENST00000560620 CACNA2D4Q7Z3S7 1137 aa13.5□□□□□ -0.25
CTDSPL2-209ENST00000560620 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.5□□□□□ -0.25
CTDSPL2-209ENST00000560620 NOP9Q86U38 636 aaKnown RBP13.5□□□□□ -0.25
CTDSPL2-209ENST00000560620 TAC4Q86UU9 113 aa13.5□□□□□ -0.25
CTDSPL2-209ENST00000560620 CHPFQ8IZ52 775 aa13.5□□□□□ -0.25
CTDSPL2-209ENST00000560620 PGBD3Q8N328 593 aa13.5□□□□□ -0.25
CTDSPL2-209ENST00000560620 MSANTD4Q8NCY6 345 aa13.5□□□□□ -0.25
CTDSPL2-209ENST00000560620 RUBCNQ92622 972 aa13.5□□□□□ -0.25
CTDSPL2-209ENST00000560620 ERLEC1Q96DZ1 483 aa13.5□□□□□ -0.25
CTDSPL2-209ENST00000560620 TMA16Q96EY4 203 aaKnown RBP13.5□□□□□ -0.25
CTDSPL2-209ENST00000560620 DDX50Q9BQ39 737 aaKnown RBP13.5□□□□□ -0.25
CTDSPL2-209ENST00000560620 BPIFA3Q9BQP9 254 aa13.5□□□□□ -0.25
CTDSPL2-209ENST00000560620 TPSD1Q9BZJ3 242 aa13.5□□□□□ -0.25
CTDSPL2-209ENST00000560620 FAM204AQ9H8W3 233 aa13.5□□□□□ -0.25
CTDSPL2-209ENST00000560620 GMEB2Q9UKD1 530 aa13.5□□□□□ -0.25
CTDSPL2-209ENST00000560620 TLR6Q9Y2C9 796 aa13.5□□□□□ -0.25
CTDSPL2-209ENST00000560620 GOLGA6L7A0A1B0GV03 622 aa13.49□□□□□ -0.25
CTDSPL2-209ENST00000560620 SGK1O00141 431 aa13.49□□□□□ -0.25
CTDSPL2-209ENST00000560620 EPHB6O15197 1021 aa13.49□□□□□ -0.25
CTDSPL2-209ENST00000560620 ZBTB24O43167 697 aaPredicted RBP13.49□□□□□ -0.25
CTDSPL2-209ENST00000560620 HRO43593 1189 aa13.49□□□□□ -0.25
CTDSPL2-209ENST00000560620 HSF2BPO75031 334 aa13.49□□□□□ -0.25
CTDSPL2-209ENST00000560620 RPP40O75818 363 aaKnown RBP13.49□□□□□ -0.25
CTDSPL2-209ENST00000560620 LATS1O95835 1130 aa13.49□□□□□ -0.25
CTDSPL2-209ENST00000560620 PENKP01210 267 aaPredicted RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms