RNA–Protein interactions for RNA: ENST00000560514.1

TSPAN3-208, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 638 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-208ENST00000560514 COPAP53621 1224 aa18.73■□□□□ 0.59
TSPAN3-208ENST00000560514 SNRPFP62306 86 aaKnown RBP18.73■□□□□ 0.59
TSPAN3-208ENST00000560514 SEMG2Q02383 582 aa18.73■□□□□ 0.59
TSPAN3-208ENST00000560514 LSM14AQ8ND56 463 aaKnown RBP18.73■□□□□ 0.59
TSPAN3-208ENST00000560514 BAP1Q92560 729 aa18.73■□□□□ 0.59
TSPAN3-208ENST00000560514 ZNF516Q92618 1163 aa18.73■□□□□ 0.59
TSPAN3-208ENST00000560514 DCLK3Q9C098 648 aa18.73■□□□□ 0.59
TSPAN3-208ENST00000560514 C6orf106Q9H6K1 298 aaPredicted RBP18.73■□□□□ 0.59
TSPAN3-208ENST00000560514 VRTNQ9H8Y1 702 aa18.73■□□□□ 0.59
TSPAN3-208ENST00000560514 TM9SF3Q9HD45 589 aa18.73■□□□□ 0.59
TSPAN3-208ENST00000560514 OSGEPQ9NPF4 335 aa18.73■□□□□ 0.59
TSPAN3-208ENST00000560514 OSER1Q9NX31 292 aa18.73■□□□□ 0.59
TSPAN3-208ENST00000560514 NAGPAQ9UK23 515 aa18.73■□□□□ 0.59
TSPAN3-208ENST00000560514 ZBTB32Q9Y2Y4 487 aaPredicted RBP18.73■□□□□ 0.59
TSPAN3-208ENST00000560514 PCDHA5Q9Y5H7 936 aa18.73■□□□□ 0.59
TSPAN3-208ENST00000560514 A0A1W2PQH9 124 aa18.72■□□□□ 0.59
TSPAN3-208ENST00000560514 TIMM44O43615 452 aa18.72■□□□□ 0.59
TSPAN3-208ENST00000560514 DFNA5O60443 496 aa18.72■□□□□ 0.59
TSPAN3-208ENST00000560514 STC2O76061 302 aa18.72■□□□□ 0.59
TSPAN3-208ENST00000560514 PENKP01210 267 aaPredicted RBP18.72■□□□□ 0.59
TSPAN3-208ENST00000560514 PRKCHP24723 683 aa18.72■□□□□ 0.59
TSPAN3-208ENST00000560514 ADORA2BP29275 332 aa18.72■□□□□ 0.59
TSPAN3-208ENST00000560514 PSEN1P49768 467 aa18.72■□□□□ 0.59
TSPAN3-208ENST00000560514 AP3M2P53677 418 aa18.72■□□□□ 0.59
TSPAN3-208ENST00000560514 C21orf59P57076 290 aa18.72■□□□□ 0.59
TSPAN3-208ENST00000560514 COG7P83436 770 aa18.72■□□□□ 0.59
TSPAN3-208ENST00000560514 CEBPZQ03701 1054 aaKnown RBP18.72■□□□□ 0.59
TSPAN3-208ENST00000560514 NUMA1Q14980 2115 aa18.72■□□□□ 0.59
TSPAN3-208ENST00000560514 FYB2Q5VWT5 728 aa18.72■□□□□ 0.59
TSPAN3-208ENST00000560514 PDILTQ8N807 584 aa18.72■□□□□ 0.59
TSPAN3-208ENST00000560514 OR2T3Q8NH03 318 aa18.72■□□□□ 0.59
TSPAN3-208ENST00000560514 ZNF507Q8TCN5 953 aa18.72■□□□□ 0.59
TSPAN3-208ENST00000560514 FCRL3Q96P31 734 aaPredicted RBP18.72■□□□□ 0.59
TSPAN3-208ENST00000560514 CDK5RAP1Q96SZ6 601 aaKnown RBP18.72■□□□□ 0.59
TSPAN3-208ENST00000560514 BTBD1Q9H0C5 482 aa18.72■□□□□ 0.59
TSPAN3-208ENST00000560514 PRORYQ9H606 182 aa18.72■□□□□ 0.59
TSPAN3-208ENST00000560514 FAM49BQ9NUQ9 324 aa18.72■□□□□ 0.59
TSPAN3-208ENST00000560514 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.72■□□□□ 0.59
TSPAN3-208ENST00000560514 H0Y8X5 98 aa18.71■□□□□ 0.59
TSPAN3-208ENST00000560514 C1QL1O75973 258 aa18.71■□□□□ 0.59
TSPAN3-208ENST00000560514 FSBPO95073 299 aa18.71■□□□□ 0.59
TSPAN3-208ENST00000560514 SEMA4FO95754 770 aa18.71■□□□□ 0.59
TSPAN3-208ENST00000560514 HMBSP08397 361 aa18.71■□□□□ 0.59
TSPAN3-208ENST00000560514 CDK4P11802 303 aa18.71■□□□□ 0.59
TSPAN3-208ENST00000560514 PLA2G2AP14555 144 aa18.71■□□□□ 0.59
TSPAN3-208ENST00000560514 ACSL1P33121 698 aa18.71■□□□□ 0.59
TSPAN3-208ENST00000560514 HOXD13P35453 343 aa18.71■□□□□ 0.59
TSPAN3-208ENST00000560514 EIF2S3P41091 472 aaKnown RBP18.71■□□□□ 0.59
TSPAN3-208ENST00000560514 ASIC1P78348 528 aa18.71■□□□□ 0.59
TSPAN3-208ENST00000560514 IL9RQ01113 521 aa18.71■□□□□ 0.59
TSPAN3-208ENST00000560514 AMPD3Q01432 767 aa18.71■□□□□ 0.59
TSPAN3-208ENST00000560514 NCOA4Q13772 614 aa18.71■□□□□ 0.59
TSPAN3-208ENST00000560514 BMT2Q1RMZ1 405 aa18.71■□□□□ 0.59
TSPAN3-208ENST00000560514 NELFCDQ8IXH7 590 aa18.71■□□□□ 0.59
TSPAN3-208ENST00000560514 DDI1Q8WTU0 396 aa18.71■□□□□ 0.59
TSPAN3-208ENST00000560514 TNMDQ9H2S6 317 aa18.71■□□□□ 0.59
TSPAN3-208ENST00000560514 NMUR1Q9HB89 426 aa18.71■□□□□ 0.59
TSPAN3-208ENST00000560514 RASAL2Q9UJF2 1139 aa18.71■□□□□ 0.59
TSPAN3-208ENST00000560514 PCDHGA1Q9Y5H4 931 aa18.71■□□□□ 0.59
TSPAN3-208ENST00000560514 TGFB1I1O43294 461 aa18.7■□□□□ 0.58
TSPAN3-208ENST00000560514 STX6O43752 255 aa18.7■□□□□ 0.58
TSPAN3-208ENST00000560514 EXOC3O60645 756 aa18.7■□□□□ 0.58
TSPAN3-208ENST00000560514 PDCP20941 246 aa18.7■□□□□ 0.58
TSPAN3-208ENST00000560514 CD27P26842 260 aa18.7■□□□□ 0.58
TSPAN3-208ENST00000560514 CORO1AP31146 461 aaKnown RBP18.7■□□□□ 0.58
TSPAN3-208ENST00000560514 NDST1P52848 882 aa18.7■□□□□ 0.58
TSPAN3-208ENST00000560514 BCAT1P54687 386 aa18.7■□□□□ 0.58
TSPAN3-208ENST00000560514 CUL4AQ13619 759 aa18.7■□□□□ 0.58
TSPAN3-208ENST00000560514 FNDC3BQ53EP0 1204 aaKnown RBP18.7■□□□□ 0.58
TSPAN3-208ENST00000560514 FAM26FQ5R3K3 315 aa18.7■□□□□ 0.58
TSPAN3-208ENST00000560514 GPRIN1Q7Z2K8 1008 aa18.7■□□□□ 0.58
TSPAN3-208ENST00000560514 UNC93AQ86WB7 457 aa18.7■□□□□ 0.58
TSPAN3-208ENST00000560514 CRYBG2Q8N1P7 616 aa18.7■□□□□ 0.58
TSPAN3-208ENST00000560514 SORCS1Q8WY21 1168 aa18.7■□□□□ 0.58
TSPAN3-208ENST00000560514 SKA1Q96BD8 255 aa18.7■□□□□ 0.58
TSPAN3-208ENST00000560514 PIWIL1Q96J94 861 aaKnown RBP18.7■□□□□ 0.58
TSPAN3-208ENST00000560514 ACE2Q9BYF1 805 aaPredicted RBP18.7■□□□□ 0.58
TSPAN3-208ENST00000560514 SDCBP2Q9H190 292 aa18.7■□□□□ 0.58
TSPAN3-208ENST00000560514 PLA2G4CQ9UP65 541 aa18.7■□□□□ 0.58
TSPAN3-208ENST00000560514 SLCO1B1Q9Y6L6 691 aa18.7■□□□□ 0.58
TSPAN3-208ENST00000560514 UBE4BO95155 1302 aa18.7■□□□□ 0.58
TSPAN3-208ENST00000560514 MUC22E2RYF6 1773 aaPredicted RBP18.69■□□□□ 0.58
TSPAN3-208ENST00000560514 CAPN8A6NHC0 703 aa18.69■□□□□ 0.58
TSPAN3-208ENST00000560514 DNTTP04053 509 aa18.69■□□□□ 0.58
TSPAN3-208ENST00000560514 CASP4P49662 377 aa18.69■□□□□ 0.58
TSPAN3-208ENST00000560514 SGSM1Q2NKQ1 1148 aa18.69■□□□□ 0.58
TSPAN3-208ENST00000560514 TTC31Q49AM3 519 aaPredicted RBP18.69■□□□□ 0.58
TSPAN3-208ENST00000560514 LAYNQ6UX15 382 aa18.69■□□□□ 0.58
TSPAN3-208ENST00000560514 CLEC20AQ6ZU45 233 aa18.69■□□□□ 0.58
TSPAN3-208ENST00000560514 C12orf29Q8N999 325 aa18.69■□□□□ 0.58
TSPAN3-208ENST00000560514 BIRC7Q96CA5 298 aa18.69■□□□□ 0.58
TSPAN3-208ENST00000560514 SLC2A11Q9BYW1 496 aa18.69■□□□□ 0.58
TSPAN3-208ENST00000560514 DNAI2Q9GZS0 605 aa18.69■□□□□ 0.58
TSPAN3-208ENST00000560514 PNPLA8Q9NP80 782 aa18.69■□□□□ 0.58
TSPAN3-208ENST00000560514 CGNQ9P2M7 1197 aaKnown RBP18.69■□□□□ 0.58
TSPAN3-208ENST00000560514 RAI2Q9Y5P3 530 aa18.69■□□□□ 0.58
TSPAN3-208ENST00000560514 TP53BP1Q12888 1972 aaPredicted RBP18.68■□□□□ 0.58
TSPAN3-208ENST00000560514 A0A087X0B3 334 aa18.68■□□□□ 0.58
TSPAN3-208ENST00000560514 ENC1O14682 589 aa18.68■□□□□ 0.58
TSPAN3-208ENST00000560514 RFPL3O75679 317 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms