RNA–Protein interactions for RNA: ENST00000560445.1

TPM1-223, Transcript of tropomyosin 1, humanhuman

TSL 3 BASIC

Gene TPM1, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-223ENST00000560445 DCDC2BA2VCK2 349 aa14.71□□□□□ -0.05
TPM1-223ENST00000560445 BIN1O00499 593 aa14.71□□□□□ -0.05
TPM1-223ENST00000560445 DCLK1O15075 740 aa14.71□□□□□ -0.05
TPM1-223ENST00000560445 IRAK2O43187 625 aa14.71□□□□□ -0.05
TPM1-223ENST00000560445 SYNCRIPO60506 623 aaKnown RBP14.71□□□□□ -0.05
TPM1-223ENST00000560445 CD44P16070 742 aaKnown RBP14.71□□□□□ -0.05
TPM1-223ENST00000560445 ANP32AP39687 249 aaKnown RBP14.71□□□□□ -0.05
TPM1-223ENST00000560445 SLC11A2P49281 568 aa14.71□□□□□ -0.05
TPM1-223ENST00000560445 MFAP3P55082 362 aa14.71□□□□□ -0.05
TPM1-223ENST00000560445 TRIP4Q15650 581 aaPredicted RBP14.71□□□□□ -0.05
TPM1-223ENST00000560445 EMC10Q5UCC4 262 aa14.71□□□□□ -0.05
TPM1-223ENST00000560445 EGFLAMQ63HQ2 1017 aa14.71□□□□□ -0.05
TPM1-223ENST00000560445 MSANTD2Q6P1R3 559 aa14.71□□□□□ -0.05
TPM1-223ENST00000560445 SYT12Q8IV01 421 aa14.71□□□□□ -0.05
TPM1-223ENST00000560445 FMNL3Q8IVF7 1028 aa14.71□□□□□ -0.05
TPM1-223ENST00000560445 FAM114A1Q8IWE2 563 aa14.71□□□□□ -0.05
TPM1-223ENST00000560445 FAM217AQ8IXS0 508 aa14.71□□□□□ -0.05
TPM1-223ENST00000560445 MLKLQ8NB16 471 aa14.71□□□□□ -0.05
TPM1-223ENST00000560445 EHBP1Q8NDI1 1231 aa14.71□□□□□ -0.05
TPM1-223ENST00000560445 IPO4Q8TEX9 1081 aaKnown RBP14.71□□□□□ -0.05
TPM1-223ENST00000560445 SRRTQ9BXP5 876 aaKnown RBP14.71□□□□□ -0.05
TPM1-223ENST00000560445 KIAA1468Q9P260 1216 aa14.71□□□□□ -0.05
TPM1-223ENST00000560445 FBXO10Q9UK96 956 aa14.71□□□□□ -0.05
TPM1-223ENST00000560445 NUP205Q92621 2012 aa14.71□□□□□ -0.05
TPM1-223ENST00000560445 NDUFS2O75306 463 aa14.7□□□□□ -0.06
TPM1-223ENST00000560445 KLKB1P03952 638 aa14.7□□□□□ -0.06
TPM1-223ENST00000560445 CHRM1P11229 460 aaPredicted RBP14.7□□□□□ -0.06
TPM1-223ENST00000560445 KRT5P13647 590 aa14.7□□□□□ -0.06
TPM1-223ENST00000560445 DAOAP59103 153 aa14.7□□□□□ -0.06
TPM1-223ENST00000560445 RPL6Q02878 288 aaKnown RBP14.7□□□□□ -0.06
TPM1-223ENST00000560445 RING1Q06587 406 aa14.7□□□□□ -0.06
TPM1-223ENST00000560445 MESP2Q0VG99 397 aa14.7□□□□□ -0.06
TPM1-223ENST00000560445 TPD52L1Q16890 204 aaPredicted RBP14.7□□□□□ -0.06
TPM1-223ENST00000560445 PKDCCQ504Y2 493 aa14.7□□□□□ -0.06
TPM1-223ENST00000560445 MPP7Q5T2T1 576 aa14.7□□□□□ -0.06
TPM1-223ENST00000560445 SYCP2LQ5T4T6 812 aa14.7□□□□□ -0.06
TPM1-223ENST00000560445 ADGRF1Q5T601 910 aa14.7□□□□□ -0.06
TPM1-223ENST00000560445 FYB2Q5VWT5 728 aa14.7□□□□□ -0.06
TPM1-223ENST00000560445 UBA3Q8TBC4 463 aa14.7□□□□□ -0.06
TPM1-223ENST00000560445 SLC35F5Q8WV83 523 aa14.7□□□□□ -0.06
TPM1-223ENST00000560445 PIGKQ92643 395 aa14.7□□□□□ -0.06
TPM1-223ENST00000560445 FOXJ1Q92949 421 aa14.7□□□□□ -0.06
TPM1-223ENST00000560445 BHMTQ93088 406 aa14.7□□□□□ -0.06
TPM1-223ENST00000560445 WBP2Q969T9 261 aa14.7□□□□□ -0.06
TPM1-223ENST00000560445 SERPINB11Q96P15 392 aa14.7□□□□□ -0.06
TPM1-223ENST00000560445 INTS2Q9H0H0 1204 aaKnown RBP14.7□□□□□ -0.06
TPM1-223ENST00000560445 FBRSQ9HAH7 460 aa14.7□□□□□ -0.06
TPM1-223ENST00000560445 TMEM9BQ9NQ34 198 aa14.7□□□□□ -0.06
TPM1-223ENST00000560445 CALCOCO1Q9P1Z2 691 aa14.7□□□□□ -0.06
TPM1-223ENST00000560445 SUSD2Q9UGT4 822 aa14.7□□□□□ -0.06
TPM1-223ENST00000560445 STOML2Q9UJZ1 356 aa14.7□□□□□ -0.06
TPM1-223ENST00000560445 GTPBP10A4D1E9 387 aaKnown RBP14.69□□□□□ -0.06
TPM1-223ENST00000560445 LTFP02788 710 aa14.69□□□□□ -0.06
TPM1-223ENST00000560445 ADRB1P08588 477 aa14.69□□□□□ -0.06
TPM1-223ENST00000560445 CISD3P0C7P0 127 aa14.69□□□□□ -0.06
TPM1-223ENST00000560445 LCP1P13796 627 aa14.69□□□□□ -0.06
TPM1-223ENST00000560445 GABRG2P18507 467 aa14.69□□□□□ -0.06
TPM1-223ENST00000560445 OXTRP30559 389 aa14.69□□□□□ -0.06
TPM1-223ENST00000560445 MTA1Q13330 715 aa14.69□□□□□ -0.06
TPM1-223ENST00000560445 NNTQ13423 1086 aa14.69□□□□□ -0.06
TPM1-223ENST00000560445 MAP7D1Q3KQU3 841 aa14.69□□□□□ -0.06
TPM1-223ENST00000560445 BEND5Q7L4P6 421 aa14.69□□□□□ -0.06
TPM1-223ENST00000560445 METTL3Q86U44 580 aaKnown RBP14.69□□□□□ -0.06
TPM1-223ENST00000560445 SFTPA1Q8IWL2 248 aa14.69□□□□□ -0.06
TPM1-223ENST00000560445 STK32AQ8WU08 396 aa14.69□□□□□ -0.06
TPM1-223ENST00000560445 AZIN2Q96A70 460 aa14.69□□□□□ -0.06
TPM1-223ENST00000560445 NOX5Q96PH1 765 aa14.69□□□□□ -0.06
TPM1-223ENST00000560445 PLK2Q9NYY3 685 aa14.69□□□□□ -0.06
TPM1-223ENST00000560445 PLA2G4CQ9UP65 541 aa14.69□□□□□ -0.06
TPM1-223ENST00000560445 CNTN6Q9UQ52 1028 aa14.69□□□□□ -0.06
TPM1-223ENST00000560445 INVSQ9Y283 1065 aa14.69□□□□□ -0.06
TPM1-223ENST00000560445 STON1Q9Y6Q2 735 aa14.69□□□□□ -0.06
TPM1-223ENST00000560445 SPTBN2O15020 2390 aa14.69□□□□□ -0.06
TPM1-223ENST00000560445 CNOT1A5YKK6 2376 aaKnown RBP14.68□□□□□ -0.06
TPM1-223ENST00000560445 A0A1W2PQF6 199 aa14.68□□□□□ -0.06
TPM1-223ENST00000560445 YJEFN3A6XGL0 299 aa14.68□□□□□ -0.06
TPM1-223ENST00000560445 PRRT4C9JH25 899 aa14.68□□□□□ -0.06
TPM1-223ENST00000560445 E7ENQ6 273 aa14.68□□□□□ -0.06
TPM1-223ENST00000560445 GDF9O60383 454 aa14.68□□□□□ -0.06
TPM1-223ENST00000560445 GADD45BO75293 160 aaPredicted RBP14.68□□□□□ -0.06
TPM1-223ENST00000560445 GNSP15586 552 aa14.68□□□□□ -0.06
TPM1-223ENST00000560445 BCKDHBP21953 392 aa14.68□□□□□ -0.06
TPM1-223ENST00000560445 BMP6P22004 513 aa14.68□□□□□ -0.06
TPM1-223ENST00000560445 BRD2P25440 801 aaKnown RBP14.68□□□□□ -0.06
TPM1-223ENST00000560445 HOXC13P31276 330 aa14.68□□□□□ -0.06
TPM1-223ENST00000560445 ATXN3P54252 364 aaPredicted RBP14.68□□□□□ -0.06
TPM1-223ENST00000560445 STX17P56962 302 aa14.68□□□□□ -0.06
TPM1-223ENST00000560445 SFSWAPQ12872 951 aaKnown RBP14.68□□□□□ -0.06
TPM1-223ENST00000560445 CCDC6Q16204 474 aa14.68□□□□□ -0.06
TPM1-223ENST00000560445 KIAA1324Q6UXG2 1013 aaKnown RBP14.68□□□□□ -0.06
TPM1-223ENST00000560445 GBP6Q6ZN66 633 aa14.68□□□□□ -0.06
TPM1-223ENST00000560445 TOGARAM2Q6ZUX3 1019 aa14.68□□□□□ -0.06
TPM1-223ENST00000560445 RRAGAQ7L523 313 aa14.68□□□□□ -0.06
TPM1-223ENST00000560445 AHI1Q8N157 1196 aa14.68□□□□□ -0.06
TPM1-223ENST00000560445 LMO3Q8TAP4 145 aa14.68□□□□□ -0.06
TPM1-223ENST00000560445 EDEM1Q92611 657 aa14.68□□□□□ -0.06
TPM1-223ENST00000560445 TMA16Q96EY4 203 aaKnown RBP14.68□□□□□ -0.06
TPM1-223ENST00000560445 MED15Q96RN5 788 aa14.68□□□□□ -0.06
TPM1-223ENST00000560445 CIPCQ9C0C6 399 aa14.68□□□□□ -0.06
TPM1-223ENST00000560445 ST7Q9NRC1 585 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms