RNA–Protein interactions for RNA: ENST00000560433.5

SNRPA1-211, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-211ENST00000560433 BCCIPQ9P287 314 aaKnown RBP eCLIP11.28□□□□□ -0.6
SNRPA1-211ENST00000560433 MAGED2Q9UNF1 606 aaPredicted RBP11.28□□□□□ -0.6
SNRPA1-211ENST00000560433 DRG1Q9Y295 367 aaKnown RBP11.28□□□□□ -0.6
SNRPA1-211ENST00000560433 NFS1Q9Y697 457 aa11.28□□□□□ -0.6
SNRPA1-211ENST00000560433 ARHGEF37A1IGU5 675 aa11.28□□□□□ -0.6
SNRPA1-211ENST00000560433 SRGAP2BP0DMP2 458 aa11.28□□□□□ -0.6
SNRPA1-211ENST00000560433 DNAJB2P25686 324 aa11.28□□□□□ -0.6
SNRPA1-211ENST00000560433 ADRA1BP35368 520 aa11.28□□□□□ -0.6
SNRPA1-211ENST00000560433 BASP1P80723 227 aaKnown RBP11.28□□□□□ -0.6
SNRPA1-211ENST00000560433 ROR1Q01973 937 aa11.28□□□□□ -0.6
SNRPA1-211ENST00000560433 TFDP2Q14188 446 aa11.28□□□□□ -0.6
SNRPA1-211ENST00000560433 MRPL58Q14197 206 aaKnown RBP11.28□□□□□ -0.6
SNRPA1-211ENST00000560433 KYNUQ16719 465 aa11.28□□□□□ -0.6
SNRPA1-211ENST00000560433 BTBD8Q5XKL5 378 aa11.28□□□□□ -0.6
SNRPA1-211ENST00000560433 NCBP2-AS2Q69YL0 99 aa11.28□□□□□ -0.6
SNRPA1-211ENST00000560433 SLC9A4Q6AI14 798 aa11.28□□□□□ -0.6
SNRPA1-211ENST00000560433 DRICH1Q6PGQ1 229 aaPredicted RBP11.28□□□□□ -0.6
SNRPA1-211ENST00000560433 GOLGA6L1Q8N7Z2 621 aa11.28□□□□□ -0.6
SNRPA1-211ENST00000560433 TTC13Q8NBP0 860 aa11.28□□□□□ -0.6
SNRPA1-211ENST00000560433 DQX1Q8TE96 717 aaKnown RBP11.28□□□□□ -0.6
SNRPA1-211ENST00000560433 RNF139Q8WU17 664 aa11.28□□□□□ -0.6
SNRPA1-211ENST00000560433 C9orf72Q96LT7 481 aa11.28□□□□□ -0.6
SNRPA1-211ENST00000560433 LGMNQ99538 433 aa11.28□□□□□ -0.6
SNRPA1-211ENST00000560433 TTPALQ9BTX7 342 aa11.28□□□□□ -0.6
SNRPA1-211ENST00000560433 CDC42EP4Q9H3Q1 356 aaKnown RBP11.28□□□□□ -0.6
SNRPA1-211ENST00000560433 XPO7Q9UIA9 1087 aaKnown RBP11.28□□□□□ -0.6
SNRPA1-211ENST00000560433 PCDHB5Q9Y5E4 795 aa11.28□□□□□ -0.6
SNRPA1-211ENST00000560433 NUP205Q92621 2012 aa11.28□□□□□ -0.6
SNRPA1-211ENST00000560433 XIRP2A4UGR9 3374 aa11.27□□□□□ -0.6
SNRPA1-211ENST00000560433 MYO16Q9Y6X6 1858 aa11.27□□□□□ -0.6
SNRPA1-211ENST00000560433 TLDC2A0PJX2 215 aa11.27□□□□□ -0.6
SNRPA1-211ENST00000560433 MTMR11A4FU01 709 aa11.27□□□□□ -0.6
SNRPA1-211ENST00000560433 HOXA2O43364 376 aa11.27□□□□□ -0.6
SNRPA1-211ENST00000560433 MOCS2O96007 188 aaPredicted RBP11.27□□□□□ -0.6
SNRPA1-211ENST00000560433 OR1D2P34982 312 aa11.27□□□□□ -0.6
SNRPA1-211ENST00000560433 ARL4AP40617 200 aa11.27□□□□□ -0.6
SNRPA1-211ENST00000560433 SLCO1A2P46721 670 aa11.27□□□□□ -0.6
SNRPA1-211ENST00000560433 CTCFP49711 727 aaPredicted RBP11.27□□□□□ -0.6
SNRPA1-211ENST00000560433 LMNB2Q03252 620 aa11.27□□□□□ -0.6
SNRPA1-211ENST00000560433 ZNF844Q08AG5 666 aa11.27□□□□□ -0.6
SNRPA1-211ENST00000560433 FASTKD3Q14CZ7 662 aaKnown RBP11.27□□□□□ -0.6
SNRPA1-211ENST00000560433 ALS2CLQ60I27 953 aa11.27□□□□□ -0.6
SNRPA1-211ENST00000560433 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.27□□□□□ -0.6
SNRPA1-211ENST00000560433 TOP1MTQ969P6 601 aa11.27□□□□□ -0.6
SNRPA1-211ENST00000560433 ARMC5Q96C12 935 aa11.27□□□□□ -0.6
SNRPA1-211ENST00000560433 MRPL9Q9BYD2 267 aaKnown RBP11.27□□□□□ -0.6
SNRPA1-211ENST00000560433 ARHGEF4Q9NR80 690 aa11.27□□□□□ -0.6
SNRPA1-211ENST00000560433 SZT2Q5T011 3432 aa11.27□□□□□ -0.61
SNRPA1-211ENST00000560433 MYO18AQ92614 2054 aaKnown RBP11.27□□□□□ -0.61
SNRPA1-211ENST00000560433 WDR27A2RRH5 827 aa11.27□□□□□ -0.61
SNRPA1-211ENST00000560433 DNALI1O14645 258 aaPredicted RBP11.27□□□□□ -0.61
SNRPA1-211ENST00000560433 MFSD11O43934 449 aa11.27□□□□□ -0.61
SNRPA1-211ENST00000560433 EN2P19622 333 aaPredicted RBP11.27□□□□□ -0.61
SNRPA1-211ENST00000560433 IFFO1Q0D2I5 559 aa11.27□□□□□ -0.61
SNRPA1-211ENST00000560433 EFHC2Q5JST6 749 aa11.27□□□□□ -0.61
SNRPA1-211ENST00000560433 C1orf53Q5VUE5 145 aa11.27□□□□□ -0.61
SNRPA1-211ENST00000560433 HIBCHQ6NVY1 386 aaPredicted RBP11.27□□□□□ -0.61
SNRPA1-211ENST00000560433 KCNT2Q6UVM3 1135 aa11.27□□□□□ -0.61
SNRPA1-211ENST00000560433 SYDE1Q6ZW31 735 aaPredicted RBP11.27□□□□□ -0.61
SNRPA1-211ENST00000560433 NUP93Q8N1F7 819 aa11.27□□□□□ -0.61
SNRPA1-211ENST00000560433 FBXO22Q8NEZ5 403 aa11.27□□□□□ -0.61
SNRPA1-211ENST00000560433 CCDC110Q8TBZ0 833 aa11.27□□□□□ -0.61
SNRPA1-211ENST00000560433 FAM71BQ8TC56 605 aa11.27□□□□□ -0.61
SNRPA1-211ENST00000560433 FAF2Q96CS3 445 aa11.27□□□□□ -0.61
SNRPA1-211ENST00000560433 USP29Q9HBJ7 922 aa11.27□□□□□ -0.61
SNRPA1-211ENST00000560433 DTLQ9NZJ0 730 aa11.27□□□□□ -0.61
SNRPA1-211ENST00000560433 GMIPQ9P107 970 aa11.27□□□□□ -0.61
SNRPA1-211ENST00000560433 FBXW11Q9UKB1 542 aa11.27□□□□□ -0.61
SNRPA1-211ENST00000560433 TPX2Q9ULW0 747 aaKnown RBP11.27□□□□□ -0.61
SNRPA1-211ENST00000560433 ZBBXA8MT70 800 aa11.26□□□□□ -0.61
SNRPA1-211ENST00000560433 EEF2KO00418 725 aaKnown RBP11.26□□□□□ -0.61
SNRPA1-211ENST00000560433 PIAS1O75925 651 aa11.26□□□□□ -0.61
SNRPA1-211ENST00000560433 TIMP1P01033 207 aa11.26□□□□□ -0.61
SNRPA1-211ENST00000560433 HSPA1AP0DMV8 641 aaKnown RBP11.26□□□□□ -0.61
SNRPA1-211ENST00000560433 HSPA1BP0DMV9 641 aaKnown RBP11.26□□□□□ -0.61
SNRPA1-211ENST00000560433 NFE2Q16621 373 aaPredicted RBP11.26□□□□□ -0.61
SNRPA1-211ENST00000560433 TTC19Q6DKK2 380 aaPredicted RBP11.26□□□□□ -0.61
SNRPA1-211ENST00000560433 KIAA1841Q6NSI8 718 aa11.26□□□□□ -0.61
SNRPA1-211ENST00000560433 DEPDC1BQ8WUY9 529 aa11.26□□□□□ -0.61
SNRPA1-211ENST00000560433 IGSF21Q96ID5 467 aa11.26□□□□□ -0.61
SNRPA1-211ENST00000560433 SH3GL2Q99962 352 aa11.26□□□□□ -0.61
SNRPA1-211ENST00000560433 PABPC3Q9H361 631 aaKnown RBP11.26□□□□□ -0.61
SNRPA1-211ENST00000560433 MED4Q9NPJ6 270 aa11.26□□□□□ -0.61
SNRPA1-211ENST00000560433 UNC80Q8N2C7 3258 aa11.26□□□□□ -0.61
SNRPA1-211ENST00000560433 FOXO6A8MYZ6 492 aa11.26□□□□□ -0.61
SNRPA1-211ENST00000560433 RIPK2O43353 540 aa11.26□□□□□ -0.61
SNRPA1-211ENST00000560433 CA8P35219 290 aa11.26□□□□□ -0.61
SNRPA1-211ENST00000560433 WDR5P61964 334 aaKnown RBP11.26□□□□□ -0.61
SNRPA1-211ENST00000560433 BTG3Q14201 252 aaPredicted RBP11.26□□□□□ -0.61
SNRPA1-211ENST00000560433 RNASEH2BQ5TBB1 312 aaKnown RBP11.26□□□□□ -0.61
SNRPA1-211ENST00000560433 RFX8Q6ZV50 586 aa11.26□□□□□ -0.61
SNRPA1-211ENST00000560433 NECAB2Q7Z6G3 386 aa11.26□□□□□ -0.61
SNRPA1-211ENST00000560433 CPT1BQ92523 772 aa11.26□□□□□ -0.61
SNRPA1-211ENST00000560433 RBM15Q96T37 977 aaKnown RBP eCLIP11.26□□□□□ -0.61
SNRPA1-211ENST00000560433 PCDH9Q9HC56 1237 aa11.26□□□□□ -0.61
SNRPA1-211ENST00000560433 SEPT10Q9P0V9 454 aa11.26□□□□□ -0.61
SNRPA1-211ENST00000560433 OR12D3Q9UGF7 316 aa11.26□□□□□ -0.61
SNRPA1-211ENST00000560433 ADAM21Q9UKJ8 722 aa11.26□□□□□ -0.61
SNRPA1-211ENST00000560433 AVILO75366 819 aa11.25□□□□□ -0.61
SNRPA1-211ENST00000560433 TMEM63AO94886 807 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms