RNA–Protein interactions for RNA: ENST00000560417.5

MARK3-220, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 3

Gene MARK3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-220ENST00000560417 EIF3CQ99613 913 aaKnown RBP6.33□□□□□ -1.4
MARK3-220ENST00000560417 NAP1L4Q99733 375 aaKnown RBP6.33□□□□□ -1.4
MARK3-220ENST00000560417 CCDC134Q9H6E4 229 aa6.33□□□□□ -1.4
MARK3-220ENST00000560417 SNX15Q9NRS6 342 aa6.33□□□□□ -1.4
MARK3-220ENST00000560417 FBXO28Q9NVF7 368 aa6.33□□□□□ -1.4
MARK3-220ENST00000560417 KCND3Q9UK17 655 aa6.33□□□□□ -1.4
MARK3-220ENST00000560417 MYRFQ9Y2G1 1151 aa6.33□□□□□ -1.4
MARK3-220ENST00000560417 TISP43B9A030 160 aa6.32□□□□□ -1.4
MARK3-220ENST00000560417 ZNF213O14771 459 aa6.32□□□□□ -1.4
MARK3-220ENST00000560417 NKX2-8O15522 239 aa6.32□□□□□ -1.4
MARK3-220ENST00000560417 SUV39H1O43463 412 aa6.32□□□□□ -1.4
MARK3-220ENST00000560417 TMIGD3P0DMS9 266 aaPredicted RBP6.32□□□□□ -1.4
MARK3-220ENST00000560417 NDUFB7P17568 137 aa6.32□□□□□ -1.4
MARK3-220ENST00000560417 CD53P19397 219 aa6.32□□□□□ -1.4
MARK3-220ENST00000560417 FPR3P25089 353 aa6.32□□□□□ -1.4
MARK3-220ENST00000560417 THBS4P35443 961 aa6.32□□□□□ -1.4
MARK3-220ENST00000560417 IGHMBP2P38935 993 aaKnown RBP6.32□□□□□ -1.4
MARK3-220ENST00000560417 EEFSECP57772 596 aaKnown RBP6.32□□□□□ -1.4
MARK3-220ENST00000560417 RPL15P61313 204 aaKnown RBP6.32□□□□□ -1.4
MARK3-220ENST00000560417 GPC5P78333 572 aa6.32□□□□□ -1.4
MARK3-220ENST00000560417 DCTN1Q14203 1278 aa6.32□□□□□ -1.4
MARK3-220ENST00000560417 TBRG1Q3YBR2 411 aa6.32□□□□□ -1.4
MARK3-220ENST00000560417 AARS2Q5JTZ9 985 aaKnown RBP6.32□□□□□ -1.4
MARK3-220ENST00000560417 L1TD1Q5T7N2 865 aaKnown RBP6.32□□□□□ -1.4
MARK3-220ENST00000560417 INTS11Q5TA45 600 aaKnown RBP6.32□□□□□ -1.4
MARK3-220ENST00000560417 DENND2CQ68D51 928 aa6.32□□□□□ -1.4
MARK3-220ENST00000560417 NGDNQ8NEJ9 315 aaKnown RBP6.32□□□□□ -1.4
MARK3-220ENST00000560417 SLC2A12Q8TD20 617 aa6.32□□□□□ -1.4
MARK3-220ENST00000560417 EDC3Q96F86 508 aaKnown RBP6.32□□□□□ -1.4
MARK3-220ENST00000560417 REXO5Q96IC2 774 aaKnown RBP6.32□□□□□ -1.4
MARK3-220ENST00000560417 FAR2Q96K12 515 aa6.32□□□□□ -1.4
MARK3-220ENST00000560417 SNX18Q96RF0 628 aa6.32□□□□□ -1.4
MARK3-220ENST00000560417 TOR3AQ9H497 397 aa6.32□□□□□ -1.4
MARK3-220ENST00000560417 GAR1Q9NY12 217 aaKnown RBP6.32□□□□□ -1.4
MARK3-220ENST00000560417 SEMA5BQ9P283 1151 aa6.32□□□□□ -1.4
MARK3-220ENST00000560417 CCNL1Q9UK58 526 aaPredicted RBP6.32□□□□□ -1.4
MARK3-220ENST00000560417 GCOM1H8Y6P7 765 aaPredicted RBP6.31□□□□□ -1.4
MARK3-220ENST00000560417 PRAMEF2O60811 474 aa6.31□□□□□ -1.4
MARK3-220ENST00000560417 POLBP06746 335 aa6.31□□□□□ -1.4
MARK3-220ENST00000560417 ADH4P08319 380 aa6.31□□□□□ -1.4
MARK3-220ENST00000560417 FAM163BP0C2L3 166 aa6.31□□□□□ -1.4
MARK3-220ENST00000560417 EBLN1P0CF75 366 aa6.31□□□□□ -1.4
MARK3-220ENST00000560417 ZNF37AP17032 561 aaPredicted RBP6.31□□□□□ -1.4
MARK3-220ENST00000560417 MCM7P33993 719 aa6.31□□□□□ -1.4
MARK3-220ENST00000560417 CCR5P51681 352 aa6.31□□□□□ -1.4
MARK3-220ENST00000560417 FOXL2P58012 376 aa6.31□□□□□ -1.4
MARK3-220ENST00000560417 RBM6P78332 1123 aaKnown RBP6.31□□□□□ -1.4
MARK3-220ENST00000560417 SIM1P81133 766 aaPredicted RBP6.31□□□□□ -1.4
MARK3-220ENST00000560417 TXNL4AP83876 142 aaKnown RBP6.31□□□□□ -1.4
MARK3-220ENST00000560417 TLE2Q04725 743 aa6.31□□□□□ -1.4
MARK3-220ENST00000560417 ZNF569Q5MCW4 686 aa6.31□□□□□ -1.4
MARK3-220ENST00000560417 HECTD2Q5U5R9 776 aa6.31□□□□□ -1.4
MARK3-220ENST00000560417 SYT13Q7L8C5 426 aa6.31□□□□□ -1.4
MARK3-220ENST00000560417 RASGRP2Q7LDG7 609 aa6.31□□□□□ -1.4
MARK3-220ENST00000560417 C12orf76Q8N812 135 aaPredicted RBP6.31□□□□□ -1.4
MARK3-220ENST00000560417 TRMT61AQ96FX7 289 aaKnown RBP6.31□□□□□ -1.4
MARK3-220ENST00000560417 COG8Q96MW5 612 aa6.31□□□□□ -1.4
MARK3-220ENST00000560417 BBC3Q96PG8 261 aaPredicted RBP6.31□□□□□ -1.4
MARK3-220ENST00000560417 TWNKQ96RR1 684 aa6.31□□□□□ -1.4
MARK3-220ENST00000560417 EIF2AK1Q9BQI3 630 aaKnown RBP6.31□□□□□ -1.4
MARK3-220ENST00000560417 CDCP1Q9H5V8 836 aa6.31□□□□□ -1.4
MARK3-220ENST00000560417 PCDHB2Q9Y5E7 798 aa6.31□□□□□ -1.4
MARK3-220ENST00000560417 MBD3L5A6NJ08 208 aaPredicted RBP6.3□□□□□ -1.4
MARK3-220ENST00000560417 B8ZZF3 427 aa6.3□□□□□ -1.4
MARK3-220ENST00000560417 WDHD1O75717 1129 aaPredicted RBP6.3□□□□□ -1.4
MARK3-220ENST00000560417 KRT38O76015 456 aa6.3□□□□□ -1.4
MARK3-220ENST00000560417 HEXIM1O94992 359 aaKnown RBP6.3□□□□□ -1.4
MARK3-220ENST00000560417 PDE8BO95263 885 aa6.3□□□□□ -1.4
MARK3-220ENST00000560417 CYP3A4P08684 503 aa6.3□□□□□ -1.4
MARK3-220ENST00000560417 CNPP09543 421 aaKnown RBP6.3□□□□□ -1.4
MARK3-220ENST00000560417 TNFRSF1AP19438 455 aa6.3□□□□□ -1.4
MARK3-220ENST00000560417 DRD4P21917 467 aa6.3□□□□□ -1.4
MARK3-220ENST00000560417 MATN1P21941 496 aa6.3□□□□□ -1.4
MARK3-220ENST00000560417 CNTFP26441 200 aa6.3□□□□□ -1.4
MARK3-220ENST00000560417 RARRES1P49788 294 aa6.3□□□□□ -1.4
MARK3-220ENST00000560417 CCT8P50990 548 aa6.3□□□□□ -1.4
MARK3-220ENST00000560417 CFHR3Q02985 330 aa6.3□□□□□ -1.4
MARK3-220ENST00000560417 CCDC15Q0P6D6 951 aa6.3□□□□□ -1.4
MARK3-220ENST00000560417 MAP3K21Q5TCX8 1036 aa6.3□□□□□ -1.4
MARK3-220ENST00000560417 JAKMIP3Q5VZ66 844 aa6.3□□□□□ -1.4
MARK3-220ENST00000560417 LAIR1Q6GTX8 287 aa6.3□□□□□ -1.4
MARK3-220ENST00000560417 KIRREL2Q6UWL6 708 aa6.3□□□□□ -1.4
MARK3-220ENST00000560417 BBS12Q6ZW61 710 aa6.3□□□□□ -1.4
MARK3-220ENST00000560417 TMEM57Q8N5G2 664 aa6.3□□□□□ -1.4
MARK3-220ENST00000560417 PAF1Q8N7H5 531 aa6.3□□□□□ -1.4
MARK3-220ENST00000560417 OR52L2PQ8NGH6 319 aa6.3□□□□□ -1.4
MARK3-220ENST00000560417 TBC1D5Q92609 795 aa6.3□□□□□ -1.4
MARK3-220ENST00000560417 GOLGA1Q92805 767 aa6.3□□□□□ -1.4
MARK3-220ENST00000560417 KTI12Q96EK9 354 aaPredicted RBP6.3□□□□□ -1.4
MARK3-220ENST00000560417 CINPQ9BW66 212 aaPredicted RBP6.3□□□□□ -1.4
MARK3-220ENST00000560417 CHODLQ9H9P2 273 aa6.3□□□□□ -1.4
MARK3-220ENST00000560417 TMLHEQ9NVH6 421 aa6.3□□□□□ -1.4
MARK3-220ENST00000560417 TMEM160Q9NX00 188 aa6.3□□□□□ -1.4
MARK3-220ENST00000560417 TRPC5Q9UL62 973 aaPredicted RBP6.3□□□□□ -1.4
MARK3-220ENST00000560417 FZD4Q9ULV1 537 aa6.3□□□□□ -1.4
MARK3-220ENST00000560417 CRYL1Q9Y2S2 319 aa6.3□□□□□ -1.4
MARK3-220ENST00000560417 DERAQ9Y315 318 aa6.3□□□□□ -1.4
MARK3-220ENST00000560417 QSOX1O00391 747 aa6.29□□□□□ -1.4
MARK3-220ENST00000560417 MGST3O14880 152 aa6.29□□□□□ -1.4
MARK3-220ENST00000560417 HOXC11O43248 304 aaPredicted RBP6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms