RNA–Protein interactions for RNA: ENST00000559996.1

HERC1-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 443 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-206ENST00000559996 HES6Q96HZ4 224 aa9.77□□□□□ -0.85
HERC1-206ENST00000559996 FCRL2Q96LA5 508 aaPredicted RBP9.77□□□□□ -0.85
HERC1-206ENST00000559996 LRRC3BQ96PB8 259 aa9.77□□□□□ -0.85
HERC1-206ENST00000559996 GAS2L1Q99501 681 aaPredicted RBP9.77□□□□□ -0.85
HERC1-206ENST00000559996 ATXN3LQ9H3M9 355 aa9.77□□□□□ -0.85
HERC1-206ENST00000559996 ASAH2Q9NR71 780 aa9.77□□□□□ -0.85
HERC1-206ENST00000559996 GKN1Q9NS71 199 aa9.77□□□□□ -0.85
HERC1-206ENST00000559996 ARHGEF38Q9NXL2 777 aa9.77□□□□□ -0.85
HERC1-206ENST00000559996 CLDND1Q9NY35 253 aa9.77□□□□□ -0.85
HERC1-206ENST00000559996 RRN3Q9NYV6 651 aa9.77□□□□□ -0.85
HERC1-206ENST00000559996 PACSIN2Q9UNF0 486 aaPredicted RBP9.77□□□□□ -0.85
HERC1-206ENST00000559996 EYSQ5T1H1 3165 aa9.77□□□□□ -0.85
HERC1-206ENST00000559996 GOLGA6L9A6NEM1 432 aa9.76□□□□□ -0.85
HERC1-206ENST00000559996 C3orf70A6NLC5 250 aaPredicted RBP9.76□□□□□ -0.85
HERC1-206ENST00000559996 SOBPA7XYQ1 873 aa9.76□□□□□ -0.85
HERC1-206ENST00000559996 TMEM110-MUSTN1A8MSY1 372 aa9.76□□□□□ -0.85
HERC1-206ENST00000559996 CAPN9O14815 690 aa9.76□□□□□ -0.85
HERC1-206ENST00000559996 KLKB1P03952 638 aa9.76□□□□□ -0.85
HERC1-206ENST00000559996 RALAP11233 206 aa9.76□□□□□ -0.85
HERC1-206ENST00000559996 CTNNA2P26232 953 aa9.76□□□□□ -0.85
HERC1-206ENST00000559996 WEE1P30291 646 aa9.76□□□□□ -0.85
HERC1-206ENST00000559996 CDC25CP30307 473 aa9.76□□□□□ -0.85
HERC1-206ENST00000559996 ATP5C1P36542 298 aaKnown RBP9.76□□□□□ -0.85
HERC1-206ENST00000559996 SLC1A1P43005 524 aa9.76□□□□□ -0.85
HERC1-206ENST00000559996 MARCKSL1P49006 195 aa9.76□□□□□ -0.85
HERC1-206ENST00000559996 SULT1E1P49888 294 aa9.76□□□□□ -0.85
HERC1-206ENST00000559996 KCNQ1P51787 676 aa9.76□□□□□ -0.85
HERC1-206ENST00000559996 NAP1L1P55209 391 aaKnown RBP9.76□□□□□ -0.85
HERC1-206ENST00000559996 ETF1P62495 437 aaKnown RBP9.76□□□□□ -0.85
HERC1-206ENST00000559996 SLC7A9P82251 487 aa9.76□□□□□ -0.85
HERC1-206ENST00000559996 ITIH3Q06033 890 aa9.76□□□□□ -0.85
HERC1-206ENST00000559996 EFEMP1Q12805 493 aa9.76□□□□□ -0.85
HERC1-206ENST00000559996 NNTQ13423 1086 aa9.76□□□□□ -0.85
HERC1-206ENST00000559996 CBX2Q14781 532 aaPredicted RBP9.76□□□□□ -0.85
HERC1-206ENST00000559996 TRIP4Q15650 581 aaPredicted RBP9.76□□□□□ -0.85
HERC1-206ENST00000559996 CCDC85BQ15834 202 aaPredicted RBP9.76□□□□□ -0.85
HERC1-206ENST00000559996 TAF12Q16514 161 aa9.76□□□□□ -0.85
HERC1-206ENST00000559996 CA9Q16790 459 aa9.76□□□□□ -0.85
HERC1-206ENST00000559996 CDO1Q16878 200 aa9.76□□□□□ -0.85
HERC1-206ENST00000559996 DCAF12L1Q5VU92 463 aa9.76□□□□□ -0.85
HERC1-206ENST00000559996 PDZD4Q76G19 769 aaPredicted RBP9.76□□□□□ -0.85
HERC1-206ENST00000559996 DAAM2Q86T65 1068 aa9.76□□□□□ -0.85
HERC1-206ENST00000559996 CCDC185Q8N715 623 aa9.76□□□□□ -0.85
HERC1-206ENST00000559996 SMRP1Q8NCR6 262 aa9.76□□□□□ -0.85
HERC1-206ENST00000559996 TRIM58Q8NG06 486 aa9.76□□□□□ -0.85
HERC1-206ENST00000559996 FAM71BQ8TC56 605 aa9.76□□□□□ -0.85
HERC1-206ENST00000559996 ALG3Q92685 438 aa9.76□□□□□ -0.85
HERC1-206ENST00000559996 P2RY11Q96G91 374 aa9.76□□□□□ -0.85
HERC1-206ENST00000559996 TASP1Q9H6P5 420 aa9.76□□□□□ -0.85
HERC1-206ENST00000559996 OLA1Q9NTK5 396 aaKnown RBP9.76□□□□□ -0.85
HERC1-206ENST00000559996 MARCH2Q9P0N8 246 aa9.76□□□□□ -0.85
HERC1-206ENST00000559996 XPO7Q9UIA9 1087 aaKnown RBP9.76□□□□□ -0.85
HERC1-206ENST00000559996 FZD10Q9ULW2 581 aa9.76□□□□□ -0.85
HERC1-206ENST00000559996 USP18Q9UMW8 372 aa9.76□□□□□ -0.85
HERC1-206ENST00000559996 PCDHA3Q9Y5H8 950 aa9.76□□□□□ -0.85
HERC1-206ENST00000559996 BRWD1Q9NSI6 2320 aa9.76□□□□□ -0.85
HERC1-206ENST00000559996 XIRP2A4UGR9 3374 aa9.75□□□□□ -0.85
HERC1-206ENST00000559996 DOCK8Q8NF50 2099 aa9.75□□□□□ -0.85
HERC1-206ENST00000559996 GRXCR2A6NFK2 248 aa9.75□□□□□ -0.85
HERC1-206ENST00000559996 GFRA2O00451 464 aa9.75□□□□□ -0.85
HERC1-206ENST00000559996 ENC1O14682 589 aa9.75□□□□□ -0.85
HERC1-206ENST00000559996 STC2O76061 302 aa9.75□□□□□ -0.85
HERC1-206ENST00000559996 FGF19O95750 216 aa9.75□□□□□ -0.85
HERC1-206ENST00000559996 F9P00740 461 aa9.75□□□□□ -0.85
HERC1-206ENST00000559996 ATP1A1P05023 1023 aaKnown RBP9.75□□□□□ -0.85
HERC1-206ENST00000559996 RARAP10276 462 aa9.75□□□□□ -0.85
HERC1-206ENST00000559996 PFKLP17858 780 aa9.75□□□□□ -0.85
HERC1-206ENST00000559996 HDCP19113 662 aa9.75□□□□□ -0.85
HERC1-206ENST00000559996 IL4RP24394 825 aa9.75□□□□□ -0.85
HERC1-206ENST00000559996 CTNNA1P35221 906 aaKnown RBP9.75□□□□□ -0.85
HERC1-206ENST00000559996 RDXP35241 583 aaKnown RBP9.75□□□□□ -0.85
HERC1-206ENST00000559996 ADRA1BP35368 520 aa9.75□□□□□ -0.85
HERC1-206ENST00000559996 AMPD2Q01433 879 aa9.75□□□□□ -0.85
HERC1-206ENST00000559996 DEUP1Q05D60 604 aa9.75□□□□□ -0.85
HERC1-206ENST00000559996 SEMA3BQ13214 749 aa9.75□□□□□ -0.85
HERC1-206ENST00000559996 IFI16Q16666 785 aaKnown RBP9.75□□□□□ -0.85
HERC1-206ENST00000559996 ZC3H12AQ5D1E8 599 aaKnown RBP9.75□□□□□ -0.85
HERC1-206ENST00000559996 C10orf120Q5SQS8 335 aa9.75□□□□□ -0.85
HERC1-206ENST00000559996 GPR158Q5T848 1215 aa9.75□□□□□ -0.85
HERC1-206ENST00000559996 LRRC38Q5VT99 294 aa9.75□□□□□ -0.85
HERC1-206ENST00000559996 PAPD7Q5XG87 772 aaKnown RBP9.75□□□□□ -0.85
HERC1-206ENST00000559996 Q6ZNB5 142 aa9.75□□□□□ -0.85
HERC1-206ENST00000559996 FAM131BQ86XD5 332 aa9.75□□□□□ -0.85
HERC1-206ENST00000559996 ZNF683Q8IZ20 524 aa9.75□□□□□ -0.85
HERC1-206ENST00000559996 CMTM8Q8IZV2 173 aa9.75□□□□□ -0.85
HERC1-206ENST00000559996 PYROXD2Q8N2H3 581 aa9.75□□□□□ -0.85
HERC1-206ENST00000559996 USP13Q92995 863 aaPredicted RBP9.75□□□□□ -0.85
HERC1-206ENST00000559996 RSPRY1Q96DX4 576 aa9.75□□□□□ -0.85
HERC1-206ENST00000559996 MYEOVQ96EZ4 313 aa9.75□□□□□ -0.85
HERC1-206ENST00000559996 TRIM62Q9BVG3 475 aa9.75□□□□□ -0.85
HERC1-206ENST00000559996 POMKQ9H5K3 350 aa9.75□□□□□ -0.85
HERC1-206ENST00000559996 DDIT4Q9NX09 232 aa9.75□□□□□ -0.85
HERC1-206ENST00000559996 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.75□□□□□ -0.85
HERC1-206ENST00000559996 PCSK1NQ9UHG2 260 aa9.75□□□□□ -0.85
HERC1-206ENST00000559996 LCMT1Q9UIC8 334 aa9.75□□□□□ -0.85
HERC1-206ENST00000559996 DNMT3LQ9UJW3 386 aa9.75□□□□□ -0.85
HERC1-206ENST00000559996 AMFRQ9UKV5 643 aa9.75□□□□□ -0.85
HERC1-206ENST00000559996 STAP1Q9ULZ2 295 aa9.75□□□□□ -0.85
HERC1-206ENST00000559996 CCL26Q9Y258 94 aa9.75□□□□□ -0.85
HERC1-206ENST00000559996 USTQ9Y2C2 406 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms