RNA–Protein interactions for RNA: ENST00000559937.1

SMAD3-212, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-212ENST00000559937 SWT1Q5T5J6 900 aaKnown RBP8.37□□□□□ -1.07
SMAD3-212ENST00000559937 FYB2Q5VWT5 728 aa8.37□□□□□ -1.07
SMAD3-212ENST00000559937 STEAP4Q687X5 459 aa8.37□□□□□ -1.07
SMAD3-212ENST00000559937 NCBP2-AS2Q69YL0 99 aa8.37□□□□□ -1.07
SMAD3-212ENST00000559937 KCNT2Q6UVM3 1135 aa8.37□□□□□ -1.07
SMAD3-212ENST00000559937 C17orf99Q6UX52 265 aa8.37□□□□□ -1.07
SMAD3-212ENST00000559937 PAXIP1Q6ZW49 1069 aaPredicted RBP8.37□□□□□ -1.07
SMAD3-212ENST00000559937 RPAINQ86UA6 219 aa8.37□□□□□ -1.07
SMAD3-212ENST00000559937 RSPH3Q86UC2 560 aa8.37□□□□□ -1.07
SMAD3-212ENST00000559937 PIGZQ86VD9 579 aa8.37□□□□□ -1.07
SMAD3-212ENST00000559937 CAND1Q86VP6 1230 aaKnown RBP8.37□□□□□ -1.07
SMAD3-212ENST00000559937 FAM228AQ86W67 206 aa8.37□□□□□ -1.07
SMAD3-212ENST00000559937 LRRC6Q86X45 466 aa8.37□□□□□ -1.07
SMAD3-212ENST00000559937 IGDCC3Q8IVU1 814 aa8.37□□□□□ -1.07
SMAD3-212ENST00000559937 DEFB106AQ8N104 65 aa8.37□□□□□ -1.07
SMAD3-212ENST00000559937 SCML4Q8N228 414 aa8.37□□□□□ -1.07
SMAD3-212ENST00000559937 GSDMBQ8TAX9 411 aa8.37□□□□□ -1.07
SMAD3-212ENST00000559937 RAB3IL1Q8TBN0 382 aa8.37□□□□□ -1.07
SMAD3-212ENST00000559937 CLEC4CQ8WTT0 213 aa8.37□□□□□ -1.07
SMAD3-212ENST00000559937 TFB1MQ8WVM0 346 aaKnown RBP8.37□□□□□ -1.07
SMAD3-212ENST00000559937 C10orf82Q8WW14 230 aa8.37□□□□□ -1.07
SMAD3-212ENST00000559937 WNT8BQ93098 351 aa8.37□□□□□ -1.07
SMAD3-212ENST00000559937 PGAP3Q96FM1 320 aaPredicted RBP8.37□□□□□ -1.07
SMAD3-212ENST00000559937 SIGLEC10Q96LC7 697 aa8.37□□□□□ -1.07
SMAD3-212ENST00000559937 SPATA13Q96N96 652 aa8.37□□□□□ -1.07
SMAD3-212ENST00000559937 EBNA1BP2Q99848 306 aaKnown RBP8.37□□□□□ -1.07
SMAD3-212ENST00000559937 PAIP2Q9BPZ3 127 aaKnown RBP8.37□□□□□ -1.07
SMAD3-212ENST00000559937 NAT9Q9BTE0 207 aa8.37□□□□□ -1.07
SMAD3-212ENST00000559937 BRD8Q9H0E9 1235 aa8.37□□□□□ -1.07
SMAD3-212ENST00000559937 UPF3AQ9H1J1 476 aaKnown RBP8.37□□□□□ -1.07
SMAD3-212ENST00000559937 RNF39Q9H2S5 420 aa8.37□□□□□ -1.07
SMAD3-212ENST00000559937 KIF9Q9HAQ2 790 aa8.37□□□□□ -1.07
SMAD3-212ENST00000559937 ETNK1Q9HBU6 452 aa8.37□□□□□ -1.07
SMAD3-212ENST00000559937 LRRC4Q9HBW1 653 aa8.37□□□□□ -1.07
SMAD3-212ENST00000559937 TMEM51Q9NW97 253 aa8.37□□□□□ -1.07
SMAD3-212ENST00000559937 FLRT1Q9NZU1 646 aa8.37□□□□□ -1.07
SMAD3-212ENST00000559937 ZC3H7BQ9UGR2 993 aaKnown RBP8.37□□□□□ -1.07
SMAD3-212ENST00000559937 CPA4Q9UI42 421 aa8.37□□□□□ -1.07
SMAD3-212ENST00000559937 TLL2Q9Y6L7 1015 aa8.37□□□□□ -1.07
SMAD3-212ENST00000559937 FRMPD3Q5JV73 1810 aa8.37□□□□□ -1.07
SMAD3-212ENST00000559937 MYO16Q9Y6X6 1858 aa8.36□□□□□ -1.07
SMAD3-212ENST00000559937 SHROOM3Q8TF72 1996 aa8.36□□□□□ -1.07
SMAD3-212ENST00000559937 C2CD2LO14523 706 aa8.36□□□□□ -1.07
SMAD3-212ENST00000559937 CYB561D2O14569 222 aa8.36□□□□□ -1.07
SMAD3-212ENST00000559937 PPP1R12AO14974 1030 aaPredicted RBP8.36□□□□□ -1.07
SMAD3-212ENST00000559937 LPXNO60711 386 aa8.36□□□□□ -1.07
SMAD3-212ENST00000559937 ATP2C2O75185 946 aa8.36□□□□□ -1.07
SMAD3-212ENST00000559937 TGDSO95455 350 aa8.36□□□□□ -1.07
SMAD3-212ENST00000559937 FAM200BP0CF97 657 aa8.36□□□□□ -1.07
SMAD3-212ENST00000559937 CCNB1P14635 433 aa8.36□□□□□ -1.07
SMAD3-212ENST00000559937 NQO1P15559 274 aaKnown RBP8.36□□□□□ -1.07
SMAD3-212ENST00000559937 TFE3P19532 575 aaPredicted RBP8.36□□□□□ -1.07
SMAD3-212ENST00000559937 RPL9P32969 192 aaKnown RBP8.36□□□□□ -1.07
SMAD3-212ENST00000559937 ETV4P43268 484 aa8.36□□□□□ -1.07
SMAD3-212ENST00000559937 RAB27AP51159 221 aa8.36□□□□□ -1.07
SMAD3-212ENST00000559937 GBE1Q04446 702 aa8.36□□□□□ -1.07
SMAD3-212ENST00000559937 CDK18Q07002 472 aa8.36□□□□□ -1.07
SMAD3-212ENST00000559937 ADIGQ0VDE8 80 aa8.36□□□□□ -1.07
SMAD3-212ENST00000559937 FAAP100Q0VG06 881 aa8.36□□□□□ -1.07
SMAD3-212ENST00000559937 SCAPQ12770 1279 aa8.36□□□□□ -1.07
SMAD3-212ENST00000559937 SLC10A2Q12908 348 aaPredicted RBP8.36□□□□□ -1.07
SMAD3-212ENST00000559937 PRKD1Q15139 912 aaPredicted RBP8.36□□□□□ -1.07
SMAD3-212ENST00000559937 SNCBQ16143 134 aa8.36□□□□□ -1.07
SMAD3-212ENST00000559937 INTS6LQ5JSJ4 861 aaKnown RBP8.36□□□□□ -1.07
SMAD3-212ENST00000559937 OTUD1Q5VV17 481 aaPredicted RBP8.36□□□□□ -1.07
SMAD3-212ENST00000559937 ICE2Q659A1 982 aa8.36□□□□□ -1.07
SMAD3-212ENST00000559937 TWF2Q6IBS0 349 aaKnown RBP8.36□□□□□ -1.07
SMAD3-212ENST00000559937 ZNF449Q6P9G9 518 aa8.36□□□□□ -1.07
SMAD3-212ENST00000559937 CLEC20AQ6ZU45 233 aa8.36□□□□□ -1.07
SMAD3-212ENST00000559937 FAM47EQ6ZV65 393 aa8.36□□□□□ -1.07
SMAD3-212ENST00000559937 SH2D5Q6ZV89 423 aa8.36□□□□□ -1.07
SMAD3-212ENST00000559937 PDZD4Q76G19 769 aaPredicted RBP8.36□□□□□ -1.07
SMAD3-212ENST00000559937 MRPL10Q7Z7H8 261 aaKnown RBP8.36□□□□□ -1.07
SMAD3-212ENST00000559937 SAPCD2Q86UD0 394 aa8.36□□□□□ -1.07
SMAD3-212ENST00000559937 ECHDC2Q86YB7 292 aa8.36□□□□□ -1.07
SMAD3-212ENST00000559937 RASAL3Q86YV0 1011 aa8.36□□□□□ -1.07
SMAD3-212ENST00000559937 PARP9Q8IXQ6 854 aa8.36□□□□□ -1.07
SMAD3-212ENST00000559937 ZNF276Q8N554 614 aa8.36□□□□□ -1.07
SMAD3-212ENST00000559937 CCDC185Q8N715 623 aa8.36□□□□□ -1.07
SMAD3-212ENST00000559937 CCDC110Q8TBZ0 833 aa8.36□□□□□ -1.07
SMAD3-212ENST00000559937 TCP10LQ8TDR4 215 aa8.36□□□□□ -1.07
SMAD3-212ENST00000559937 RNF139Q8WU17 664 aa8.36□□□□□ -1.07
SMAD3-212ENST00000559937 HTR3CQ8WXA8 447 aa8.36□□□□□ -1.07
SMAD3-212ENST00000559937 CAPNS2Q96L46 248 aa8.36□□□□□ -1.07
SMAD3-212ENST00000559937 RMDN2Q96LZ7 410 aa8.36□□□□□ -1.07
SMAD3-212ENST00000559937 MTG1Q9BT17 334 aaPredicted RBP8.36□□□□□ -1.07
SMAD3-212ENST00000559937 TSPYL2Q9H2G4 693 aaPredicted RBP8.36□□□□□ -1.07
SMAD3-212ENST00000559937 ECT2Q9H8V3 914 aa8.36□□□□□ -1.07
SMAD3-212ENST00000559937 CNGB3Q9NQW8 809 aa8.36□□□□□ -1.07
SMAD3-212ENST00000559937 ARHGEF3Q9NR81 526 aa8.36□□□□□ -1.07
SMAD3-212ENST00000559937 DTLQ9NZJ0 730 aa8.36□□□□□ -1.07
SMAD3-212ENST00000559937 KLK14Q9P0G3 267 aa8.36□□□□□ -1.07
SMAD3-212ENST00000559937 CDH9Q9ULB4 789 aa8.36□□□□□ -1.07
SMAD3-212ENST00000559937 GRID1Q9ULK0 1009 aa8.36□□□□□ -1.07
SMAD3-212ENST00000559937 GIT1Q9Y2X7 761 aa8.36□□□□□ -1.07
SMAD3-212ENST00000559937 PCDHA11Q9Y5I1 949 aa8.36□□□□□ -1.07
SMAD3-212ENST00000559937 PLXNA3P51805 1871 aa8.35□□□□□ -1.07
SMAD3-212ENST00000559937 TRIM49D1C9J1S8 452 aa8.35□□□□□ -1.07
SMAD3-212ENST00000559937 IGF2BP3O00425 579 aaKnown RBP eCLIP8.35□□□□□ -1.07
SMAD3-212ENST00000559937 NCAM2O15394 837 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms