RNA–Protein interactions for RNA: ENST00000559771.5

USP3-215, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-215ENST00000559771 TSTD1Q8NFU3 115 aa6.16□□□□□ -1.42
USP3-215ENST00000559771 SCAMP5Q8TAC9 235 aa6.16□□□□□ -1.42
USP3-215ENST00000559771 CCDC127Q96BQ5 260 aa6.16□□□□□ -1.42
USP3-215ENST00000559771 INTS4Q96HW7 963 aaKnown RBP6.16□□□□□ -1.42
USP3-215ENST00000559771 GBP4Q96PP9 640 aa6.16□□□□□ -1.42
USP3-215ENST00000559771 MMS19Q96T76 1030 aa6.16□□□□□ -1.42
USP3-215ENST00000559771 C7orf25Q9BPX7 421 aa6.16□□□□□ -1.42
USP3-215ENST00000559771 EDEM2Q9BV94 578 aa6.16□□□□□ -1.42
USP3-215ENST00000559771 SMYD3Q9H7B4 428 aa6.16□□□□□ -1.42
USP3-215ENST00000559771 VRTNQ9H8Y1 702 aa6.16□□□□□ -1.42
USP3-215ENST00000559771 TMEM74BQ9NUR3 256 aa6.16□□□□□ -1.42
USP3-215ENST00000559771 TRPM5Q9NZQ8 1165 aa6.16□□□□□ -1.42
USP3-215ENST00000559771 CFAP97Q9P2B7 532 aa6.16□□□□□ -1.42
USP3-215ENST00000559771 ANGPTL2Q9UKU9 493 aa6.16□□□□□ -1.42
USP3-215ENST00000559771 DMXL2Q8TDJ6 3036 aa6.15□□□□□ -1.42
USP3-215ENST00000559771 LAMA5O15230 3695 aa6.15□□□□□ -1.42
USP3-215ENST00000559771 NBEAQ8NFP9 2946 aa6.15□□□□□ -1.42
USP3-215ENST00000559771 SPTLC2O15270 562 aa6.15□□□□□ -1.42
USP3-215ENST00000559771 STX6O43752 255 aa6.15□□□□□ -1.42
USP3-215ENST00000559771 KLRC4O43908 158 aa6.15□□□□□ -1.42
USP3-215ENST00000559771 PPP6R2O75170 966 aa6.15□□□□□ -1.42
USP3-215ENST00000559771 RHOBTB1O94844 696 aa6.15□□□□□ -1.42
USP3-215ENST00000559771 KAT7O95251 611 aa6.15□□□□□ -1.42
USP3-215ENST00000559771 KLF8O95600 359 aaPredicted RBP6.15□□□□□ -1.42
USP3-215ENST00000559771 C4BPAP04003 597 aaKnown RBP6.15□□□□□ -1.42
USP3-215ENST00000559771 C1QTNF9P0C862 333 aa6.15□□□□□ -1.42
USP3-215ENST00000559771 EIF2DP41214 584 aaKnown RBP6.15□□□□□ -1.42
USP3-215ENST00000559771 P2RY2P41231 377 aa6.15□□□□□ -1.42
USP3-215ENST00000559771 PTGER3P43115 390 aa6.15□□□□□ -1.42
USP3-215ENST00000559771 PPP3CCP48454 512 aa6.15□□□□□ -1.42
USP3-215ENST00000559771 CYP2J2P51589 502 aa6.15□□□□□ -1.42
USP3-215ENST00000559771 DLG4P78352 724 aa6.15□□□□□ -1.42
USP3-215ENST00000559771 MRPS21P82921 87 aaKnown RBP6.15□□□□□ -1.42
USP3-215ENST00000559771 NR1H3Q13133 447 aa6.15□□□□□ -1.42
USP3-215ENST00000559771 CUL4BQ13620 913 aa6.15□□□□□ -1.42
USP3-215ENST00000559771 MAPRE1Q15691 268 aaKnown RBP6.15□□□□□ -1.42
USP3-215ENST00000559771 ELF2Q15723 593 aa6.15□□□□□ -1.42
USP3-215ENST00000559771 FAM26FQ5R3K3 315 aa6.15□□□□□ -1.42
USP3-215ENST00000559771 LY6G5CQ5SRR4 150 aa6.15□□□□□ -1.42
USP3-215ENST00000559771 C1orf220Q5T0J3 134 aa6.15□□□□□ -1.42
USP3-215ENST00000559771 SH3PXD2AQ5TCZ1 1133 aa6.15□□□□□ -1.42
USP3-215ENST00000559771 PEAR1Q5VY43 1037 aaPredicted RBP6.15□□□□□ -1.42
USP3-215ENST00000559771 TDRD10Q5VZ19 366 aaKnown RBP6.15□□□□□ -1.42
USP3-215ENST00000559771 UNC13DQ70J99 1090 aa6.15□□□□□ -1.42
USP3-215ENST00000559771 HS2ST1Q7LGA3 356 aa6.15□□□□□ -1.42
USP3-215ENST00000559771 BBS7Q8IWZ6 715 aa6.15□□□□□ -1.42
USP3-215ENST00000559771 NELFCDQ8IXH7 590 aa6.15□□□□□ -1.42
USP3-215ENST00000559771 FUKQ8N0W3 1084 aa6.15□□□□□ -1.42
USP3-215ENST00000559771 XXYLT1Q8NBI6 393 aa6.15□□□□□ -1.42
USP3-215ENST00000559771 B3GALNT2Q8NCR0 500 aa6.15□□□□□ -1.42
USP3-215ENST00000559771 OR6B3Q8NGW1 331 aa6.15□□□□□ -1.42
USP3-215ENST00000559771 DHX58Q96C10 678 aa6.15□□□□□ -1.42
USP3-215ENST00000559771 PNKPQ96T60 521 aa6.15□□□□□ -1.42
USP3-215ENST00000559771 SMOQ99835 787 aa6.15□□□□□ -1.42
USP3-215ENST00000559771 DUSP9Q99956 384 aaKnown RBP6.15□□□□□ -1.42
USP3-215ENST00000559771 ELOVL4Q9GZR5 314 aa6.15□□□□□ -1.42
USP3-215ENST00000559771 BLZF1Q9H2G9 400 aa6.15□□□□□ -1.42
USP3-215ENST00000559771 SNX25Q9H3E2 840 aa6.15□□□□□ -1.42
USP3-215ENST00000559771 ZSCAN16Q9H4T2 348 aaPredicted RBP6.15□□□□□ -1.42
USP3-215ENST00000559771 CCSER2Q9H7U1 834 aa6.15□□□□□ -1.42
USP3-215ENST00000559771 KIAA1586Q9HCI6 787 aa6.15□□□□□ -1.42
USP3-215ENST00000559771 DMAC2Q9NW81 257 aa6.15□□□□□ -1.42
USP3-215ENST00000559771 OSER1Q9NX31 292 aa6.15□□□□□ -1.42
USP3-215ENST00000559771 HMGXB4Q9UGU5 601 aa6.15□□□□□ -1.42
USP3-215ENST00000559771 CHORDC1Q9UHD1 332 aaPredicted RBP6.15□□□□□ -1.42
USP3-215ENST00000559771 PCDHB9Q9Y5E1 797 aa6.15□□□□□ -1.42
USP3-215ENST00000559771 FREM2Q5SZK8 3169 aa6.14□□□□□ -1.43
USP3-215ENST00000559771 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.14□□□□□ -1.43
USP3-215ENST00000559771 A0A1W2PQF6 199 aa6.14□□□□□ -1.43
USP3-215ENST00000559771 E2F8A0AVK6 867 aa6.14□□□□□ -1.43
USP3-215ENST00000559771 LRRIQ3A6PVS8 624 aaPredicted RBP6.14□□□□□ -1.43
USP3-215ENST00000559771 A8MXQ7 604 aa6.14□□□□□ -1.43
USP3-215ENST00000559771 HHLA1C9JL84 531 aa6.14□□□□□ -1.43
USP3-215ENST00000559771 HOXC11O43248 304 aaPredicted RBP6.14□□□□□ -1.43
USP3-215ENST00000559771 CUTAO60888 179 aa6.14□□□□□ -1.43
USP3-215ENST00000559771 TULP3O75386 442 aa6.14□□□□□ -1.43
USP3-215ENST00000559771 YEATS4O95619 227 aa6.14□□□□□ -1.43
USP3-215ENST00000559771 ABL1P00519 1130 aa6.14□□□□□ -1.43
USP3-215ENST00000559771 PROS1P07225 676 aa6.14□□□□□ -1.43
USP3-215ENST00000559771 HSP90AA1P07900 732 aaKnown RBP6.14□□□□□ -1.43
USP3-215ENST00000559771 MBL2P11226 248 aaPredicted RBP6.14□□□□□ -1.43
USP3-215ENST00000559771 ADH5P11766 374 aa6.14□□□□□ -1.43
USP3-215ENST00000559771 GABRG2P18507 467 aa6.14□□□□□ -1.43
USP3-215ENST00000559771 TNNI1P19237 187 aa6.14□□□□□ -1.43
USP3-215ENST00000559771 CSRP1P21291 193 aaKnown RBP6.14□□□□□ -1.43
USP3-215ENST00000559771 ANXA13P27216 316 aa6.14□□□□□ -1.43
USP3-215ENST00000559771 YWHAQP27348 245 aa6.14□□□□□ -1.43
USP3-215ENST00000559771 GBP1P32455 592 aa6.14□□□□□ -1.43
USP3-215ENST00000559771 TNFRSF4P43489 277 aa6.14□□□□□ -1.43
USP3-215ENST00000559771 PDE6CP51160 858 aa6.14□□□□□ -1.43
USP3-215ENST00000559771 NOVA1P51513 510 aaKnown RBP6.14□□□□□ -1.43
USP3-215ENST00000559771 SLC5A3P53794 718 aa6.14□□□□□ -1.43
USP3-215ENST00000559771 ASIC1P78348 528 aa6.14□□□□□ -1.43
USP3-215ENST00000559771 NUCB2P80303 420 aa6.14□□□□□ -1.43
USP3-215ENST00000559771 KDSRQ06136 332 aa6.14□□□□□ -1.43
USP3-215ENST00000559771 IFRD2Q12894 506 aaPredicted RBP6.14□□□□□ -1.43
USP3-215ENST00000559771 STK4Q13043 487 aa6.14□□□□□ -1.43
USP3-215ENST00000559771 ORC1Q13415 861 aa6.14□□□□□ -1.43
USP3-215ENST00000559771 STK38Q15208 465 aa6.14□□□□□ -1.43
USP3-215ENST00000559771 USP39Q53GS9 565 aaKnown RBP6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms