RNA–Protein interactions for RNA: ENST00000559347.1

SPG11-216, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 716 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-216ENST00000559347 ZDHHC4Q9NPG8 344 aa11.43□□□□□ -0.58
SPG11-216ENST00000559347 TAB2Q9NYJ8 693 aa11.43□□□□□ -0.58
SPG11-216ENST00000559347 PLK2Q9NYY3 685 aa11.43□□□□□ -0.58
SPG11-216ENST00000559347 TJP2Q9UDY2 1190 aa11.43□□□□□ -0.58
SPG11-216ENST00000559347 EBF1Q9UH73 591 aa11.43□□□□□ -0.58
SPG11-216ENST00000559347 RAB23Q9ULC3 237 aa11.43□□□□□ -0.58
SPG11-216ENST00000559347 PCDHGC3Q9UN70 934 aa11.43□□□□□ -0.58
SPG11-216ENST00000559347 FHOD1Q9Y613 1164 aa11.43□□□□□ -0.58
SPG11-216ENST00000559347 PTPRZ1P23471 2315 aaPredicted RBP11.42□□□□□ -0.58
SPG11-216ENST00000559347 TBC1D3BA6NDS4 549 aa11.42□□□□□ -0.58
SPG11-216ENST00000559347 AXIN1O15169 862 aa11.42□□□□□ -0.58
SPG11-216ENST00000559347 PAPSS1O43252 624 aaPredicted RBP11.42□□□□□ -0.58
SPG11-216ENST00000559347 ADAM23O75077 832 aa11.42□□□□□ -0.58
SPG11-216ENST00000559347 RPP40O75818 363 aaKnown RBP11.42□□□□□ -0.58
SPG11-216ENST00000559347 LATS1O95835 1130 aa11.42□□□□□ -0.58
SPG11-216ENST00000559347 FYNP06241 537 aa11.42□□□□□ -0.58
SPG11-216ENST00000559347 NCAM1P13591 858 aa11.42□□□□□ -0.58
SPG11-216ENST00000559347 CLCN1P35523 988 aa11.42□□□□□ -0.58
SPG11-216ENST00000559347 HARS2P49590 506 aaKnown RBP11.42□□□□□ -0.58
SPG11-216ENST00000559347 RAPGEF1Q13905 1077 aa11.42□□□□□ -0.58
SPG11-216ENST00000559347 KRT31Q15323 416 aa11.42□□□□□ -0.58
SPG11-216ENST00000559347 CRY1Q16526 586 aa11.42□□□□□ -0.58
SPG11-216ENST00000559347 EMC10Q5UCC4 262 aa11.42□□□□□ -0.58
SPG11-216ENST00000559347 KLHDC7AQ5VTJ3 777 aa11.42□□□□□ -0.58
SPG11-216ENST00000559347 TMEM92Q6UXU6 159 aa11.42□□□□□ -0.58
SPG11-216ENST00000559347 NUDT18Q6ZVK8 323 aa11.42□□□□□ -0.58
SPG11-216ENST00000559347 TRMT11Q7Z4G4 463 aaKnown RBP11.42□□□□□ -0.58
SPG11-216ENST00000559347 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.42□□□□□ -0.58
SPG11-216ENST00000559347 TMEM110Q86TL2 294 aa11.42□□□□□ -0.58
SPG11-216ENST00000559347 PASD1Q8IV76 773 aa11.42□□□□□ -0.58
SPG11-216ENST00000559347 SCUBE3Q8IX30 993 aa11.42□□□□□ -0.58
SPG11-216ENST00000559347 KIAA2013Q8IYS2 634 aa11.42□□□□□ -0.58
SPG11-216ENST00000559347 FAM71AQ8IYT1 594 aa11.42□□□□□ -0.58
SPG11-216ENST00000559347 MDGA1Q8NFP4 955 aa11.42□□□□□ -0.58
SPG11-216ENST00000559347 DQX1Q8TE96 717 aaKnown RBP11.42□□□□□ -0.58
SPG11-216ENST00000559347 FAM149B1Q96BN6 582 aa11.42□□□□□ -0.58
SPG11-216ENST00000559347 PIWIL1Q96J94 861 aaKnown RBP11.42□□□□□ -0.58
SPG11-216ENST00000559347 LSM14BQ9BX40 385 aaKnown RBP11.42□□□□□ -0.58
SPG11-216ENST00000559347 NAA15Q9BXJ9 866 aaKnown RBP11.42□□□□□ -0.58
SPG11-216ENST00000559347 TPSD1Q9BZJ3 242 aa11.42□□□□□ -0.58
SPG11-216ENST00000559347 ANO10Q9NW15 660 aa11.42□□□□□ -0.58
SPG11-216ENST00000559347 TMEM63CQ9P1W3 806 aa11.42□□□□□ -0.58
SPG11-216ENST00000559347 STOML2Q9UJZ1 356 aa11.42□□□□□ -0.58
SPG11-216ENST00000559347 FBXO10Q9UK96 956 aa11.42□□□□□ -0.58
SPG11-216ENST00000559347 GMEB2Q9UKD1 530 aa11.42□□□□□ -0.58
SPG11-216ENST00000559347 HCN2Q9UL51 889 aa11.42□□□□□ -0.58
SPG11-216ENST00000559347 CEP250Q9BV73 2442 aa11.41□□□□□ -0.58
SPG11-216ENST00000559347 PRRT4C9JH25 899 aa11.41□□□□□ -0.58
SPG11-216ENST00000559347 FOXN3O00409 490 aaPredicted RBP11.41□□□□□ -0.58
SPG11-216ENST00000559347 GFRA2O00451 464 aa11.41□□□□□ -0.58
SPG11-216ENST00000559347 CISD3P0C7P0 127 aa11.41□□□□□ -0.58
SPG11-216ENST00000559347 UCHL3P15374 230 aa11.41□□□□□ -0.58
SPG11-216ENST00000559347 HOXD9P28356 352 aaPredicted RBP11.41□□□□□ -0.58
SPG11-216ENST00000559347 DGKEP52429 567 aa11.41□□□□□ -0.58
SPG11-216ENST00000559347 ZNF445P59923 1031 aa11.41□□□□□ -0.58
SPG11-216ENST00000559347 MYL5Q02045 173 aa11.41□□□□□ -0.58
SPG11-216ENST00000559347 PTK2Q05397 1052 aa11.41□□□□□ -0.58
SPG11-216ENST00000559347 RING1Q06587 406 aa11.41□□□□□ -0.58
SPG11-216ENST00000559347 NNTQ13423 1086 aa11.41□□□□□ -0.58
SPG11-216ENST00000559347 EOGTQ5NDL2 527 aa11.41□□□□□ -0.58
SPG11-216ENST00000559347 EGFLAMQ63HQ2 1017 aa11.41□□□□□ -0.58
SPG11-216ENST00000559347 NUGGCQ68CJ6 796 aa11.41□□□□□ -0.58
SPG11-216ENST00000559347 ANO7Q6IWH7 933 aa11.41□□□□□ -0.58
SPG11-216ENST00000559347 CEP68Q76N32 757 aa11.41□□□□□ -0.58
SPG11-216ENST00000559347 BEND5Q7L4P6 421 aa11.41□□□□□ -0.58
SPG11-216ENST00000559347 SLC47A2Q86VL8 602 aa11.41□□□□□ -0.58
SPG11-216ENST00000559347 WDTC1Q8N5D0 677 aa11.41□□□□□ -0.58
SPG11-216ENST00000559347 FAM160A2Q8N612 972 aaPredicted RBP11.41□□□□□ -0.58
SPG11-216ENST00000559347 C1orf131Q8NDD1 294 aaKnown RBP11.41□□□□□ -0.58
SPG11-216ENST00000559347 KCNV2Q8TDN2 545 aa11.41□□□□□ -0.58
SPG11-216ENST00000559347 SERPINB11Q96P15 392 aa11.41□□□□□ -0.58
SPG11-216ENST00000559347 CPXM1Q96SM3 734 aa11.41□□□□□ -0.58
SPG11-216ENST00000559347 TRIM62Q9BVG3 475 aa11.41□□□□□ -0.58
SPG11-216ENST00000559347 GANQ9H2C0 597 aa11.41□□□□□ -0.58
SPG11-216ENST00000559347 LHX5Q9H2C1 402 aa11.41□□□□□ -0.58
SPG11-216ENST00000559347 PLCB1Q9NQ66 1216 aa11.41□□□□□ -0.58
SPG11-216ENST00000559347 FANCLQ9NW38 375 aa11.41□□□□□ -0.58
SPG11-216ENST00000559347 SLC27A6Q9Y2P4 619 aa11.41□□□□□ -0.58
SPG11-216ENST00000559347 STARD13Q9Y3M8 1113 aa11.41□□□□□ -0.58
SPG11-216ENST00000559347 F8VZ95 297 aa11.4□□□□□ -0.58
SPG11-216ENST00000559347 IRAK2O43187 625 aa11.4□□□□□ -0.58
SPG11-216ENST00000559347 CYBBP04839 570 aa11.4□□□□□ -0.58
SPG11-216ENST00000559347 HOXB2P14652 356 aa11.4□□□□□ -0.58
SPG11-216ENST00000559347 SGSHP51688 502 aa11.4□□□□□ -0.58
SPG11-216ENST00000559347 TBX4P57082 545 aa11.4□□□□□ -0.58
SPG11-216ENST00000559347 TYRO3Q06418 890 aa11.4□□□□□ -0.58
SPG11-216ENST00000559347 DRAP1Q14919 205 aaPredicted RBP11.4□□□□□ -0.58
SPG11-216ENST00000559347 GEN1Q17RS7 908 aa11.4□□□□□ -0.58
SPG11-216ENST00000559347 MPPE1Q53F39 396 aa11.4□□□□□ -0.58
SPG11-216ENST00000559347 FAM133BQ5BKY9 247 aaKnown RBP11.4□□□□□ -0.58
SPG11-216ENST00000559347 SYPL2Q5VXT5 272 aa11.4□□□□□ -0.58
SPG11-216ENST00000559347 ANKS1BQ7Z6G8 1248 aa11.4□□□□□ -0.58
SPG11-216ENST00000559347 TAC4Q86UU9 113 aa11.4□□□□□ -0.58
SPG11-216ENST00000559347 KBTBD6Q86V97 674 aa11.4□□□□□ -0.58
SPG11-216ENST00000559347 FCRL2Q96LA5 508 aaPredicted RBP11.4□□□□□ -0.58
SPG11-216ENST00000559347 VPS16Q9H269 839 aa11.4□□□□□ -0.58
SPG11-216ENST00000559347 POPDC2Q9HBU9 364 aa11.4□□□□□ -0.58
SPG11-216ENST00000559347 POLMQ9NP87 494 aaPredicted RBP11.4□□□□□ -0.58
SPG11-216ENST00000559347 PARD6AQ9NPB6 346 aa11.4□□□□□ -0.58
SPG11-216ENST00000559347 CLEC4EQ9ULY5 219 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms