RNA–Protein interactions for RNA: ENST00000558970.2

GABPB1-208, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5

Gene GABPB1, Length 730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-208ENST00000558970 KCNF1Q9H3M0 494 aa12.95□□□□□ -0.34
GABPB1-208ENST00000558970 EPHX3Q9H6B9 360 aa12.95□□□□□ -0.34
GABPB1-208ENST00000558970 KCNK12Q9HB15 430 aa12.95□□□□□ -0.34
GABPB1-208ENST00000558970 MRPL47Q9HD33 250 aaKnown RBP12.95□□□□□ -0.34
GABPB1-208ENST00000558970 OSGEPQ9NPF4 335 aa12.95□□□□□ -0.34
GABPB1-208ENST00000558970 PIGVQ9NUD9 493 aa12.95□□□□□ -0.34
GABPB1-208ENST00000558970 ZMYM5Q9UJ78 669 aa12.95□□□□□ -0.34
GABPB1-208ENST00000558970 WNT6Q9Y6F9 365 aa12.95□□□□□ -0.34
GABPB1-208ENST00000558970 RCCD1A6NED2 376 aa12.94□□□□□ -0.34
GABPB1-208ENST00000558970 ARHGAP6O43182 974 aa12.94□□□□□ -0.34
GABPB1-208ENST00000558970 IRAK2O43187 625 aa12.94□□□□□ -0.34
GABPB1-208ENST00000558970 NARSO43776 548 aaKnown RBP12.94□□□□□ -0.34
GABPB1-208ENST00000558970 LCA5LO95447 670 aa12.94□□□□□ -0.34
GABPB1-208ENST00000558970 CORO1AP31146 461 aaKnown RBP12.94□□□□□ -0.34
GABPB1-208ENST00000558970 GDI1P31150 447 aa12.94□□□□□ -0.34
GABPB1-208ENST00000558970 GBP1P32455 592 aa12.94□□□□□ -0.34
GABPB1-208ENST00000558970 VCPP55072 806 aaKnown RBP12.94□□□□□ -0.34
GABPB1-208ENST00000558970 TRIP4Q15650 581 aaPredicted RBP12.94□□□□□ -0.34
GABPB1-208ENST00000558970 CCDC14Q49A88 953 aa12.94□□□□□ -0.34
GABPB1-208ENST00000558970 ZC3H12AQ5D1E8 599 aaKnown RBP12.94□□□□□ -0.34
GABPB1-208ENST00000558970 CC2D1AQ6P1N0 951 aaPredicted RBP12.94□□□□□ -0.34
GABPB1-208ENST00000558970 KLHDC10Q6PID8 442 aa12.94□□□□□ -0.34
GABPB1-208ENST00000558970 FAM131BQ86XD5 332 aa12.94□□□□□ -0.34
GABPB1-208ENST00000558970 ZDHHC14Q8IZN3 488 aa12.94□□□□□ -0.34
GABPB1-208ENST00000558970 ELSPBP1Q96BH3 223 aa12.94□□□□□ -0.34
GABPB1-208ENST00000558970 NPY6RQ99463 290 aa12.94□□□□□ -0.34
GABPB1-208ENST00000558970 KIF9Q9HAQ2 790 aa12.94□□□□□ -0.34
GABPB1-208ENST00000558970 TMPRSS4Q9NRS4 437 aa12.94□□□□□ -0.34
GABPB1-208ENST00000558970 PRKAG3Q9UGI9 489 aa12.94□□□□□ -0.34
GABPB1-208ENST00000558970 LSM7Q9UK45 103 aaKnown RBP12.94□□□□□ -0.34
GABPB1-208ENST00000558970 MUC6Q6W4X9 2439 aa12.94□□□□□ -0.34
GABPB1-208ENST00000558970 COL4A2P08572 1712 aa12.93□□□□□ -0.34
GABPB1-208ENST00000558970 TMEM191CA6NGB0 347 aa12.93□□□□□ -0.34
GABPB1-208ENST00000558970 ANHXE9PGG2 379 aa12.93□□□□□ -0.34
GABPB1-208ENST00000558970 TRDMT1O14717 391 aaKnown RBP12.93□□□□□ -0.34
GABPB1-208ENST00000558970 BUB1O43683 1085 aa12.93□□□□□ -0.34
GABPB1-208ENST00000558970 PFKLP17858 780 aa12.93□□□□□ -0.34
GABPB1-208ENST00000558970 PSMC3P17980 439 aa12.93□□□□□ -0.34
GABPB1-208ENST00000558970 GJC1P36383 396 aa12.93□□□□□ -0.34
GABPB1-208ENST00000558970 GGCXP38435 758 aa12.93□□□□□ -0.34
GABPB1-208ENST00000558970 SSR1P43307 286 aaKnown RBP12.93□□□□□ -0.34
GABPB1-208ENST00000558970 NOP2P46087 812 aaKnown RBP12.93□□□□□ -0.34
GABPB1-208ENST00000558970 NAP1L1P55209 391 aaKnown RBP12.93□□□□□ -0.34
GABPB1-208ENST00000558970 COG7P83436 770 aa12.93□□□□□ -0.34
GABPB1-208ENST00000558970 TNK2Q07912 1038 aa12.93□□□□□ -0.34
GABPB1-208ENST00000558970 ZNF252P-AS1Q0IIN9 211 aa12.93□□□□□ -0.34
GABPB1-208ENST00000558970 SLC25A52Q3SY17 297 aa12.93□□□□□ -0.34
GABPB1-208ENST00000558970 SCYL2Q6P3W7 929 aa12.93□□□□□ -0.34
GABPB1-208ENST00000558970 SND1Q7KZF4 910 aaKnown RBP eCLIP12.93□□□□□ -0.34
GABPB1-208ENST00000558970 DDX42Q86XP3 938 aaKnown RBP eCLIP12.93□□□□□ -0.34
GABPB1-208ENST00000558970 CPNE8Q86YQ8 564 aa12.93□□□□□ -0.34
GABPB1-208ENST00000558970 BBS7Q8IWZ6 715 aa12.93□□□□□ -0.34
GABPB1-208ENST00000558970 ZNF276Q8N554 614 aa12.93□□□□□ -0.34
GABPB1-208ENST00000558970 SLC35G2Q8TBE7 412 aa12.93□□□□□ -0.34
GABPB1-208ENST00000558970 BHMTQ93088 406 aa12.93□□□□□ -0.34
GABPB1-208ENST00000558970 PLD4Q96BZ4 506 aa12.93□□□□□ -0.34
GABPB1-208ENST00000558970 ASIC4Q96FT7 647 aa12.93□□□□□ -0.34
GABPB1-208ENST00000558970 FCRL2Q96LA5 508 aaPredicted RBP12.93□□□□□ -0.34
GABPB1-208ENST00000558970 EBF3Q9H4W6 596 aa12.93□□□□□ -0.34
GABPB1-208ENST00000558970 BRD9Q9H8M2 597 aa12.93□□□□□ -0.34
GABPB1-208ENST00000558970 TRPV4Q9HBA0 871 aa12.93□□□□□ -0.34
GABPB1-208ENST00000558970 CD320Q9NPF0 282 aa12.93□□□□□ -0.34
GABPB1-208ENST00000558970 LUC7LQ9NQ29 371 aaKnown RBP12.93□□□□□ -0.34
GABPB1-208ENST00000558970 TRIM10Q9UDY6 481 aa12.93□□□□□ -0.34
GABPB1-208ENST00000558970 XPO7Q9UIA9 1087 aaKnown RBP12.93□□□□□ -0.34
GABPB1-208ENST00000558970 TLR6Q9Y2C9 796 aa12.93□□□□□ -0.34
GABPB1-208ENST00000558970 HBS1LQ9Y450 684 aaKnown RBP12.93□□□□□ -0.34
GABPB1-208ENST00000558970 GOLGA6L7A0A1B0GV03 622 aa12.92□□□□□ -0.34
GABPB1-208ENST00000558970 SOBPA7XYQ1 873 aa12.92□□□□□ -0.34
GABPB1-208ENST00000558970 PI4K2BG5E9Z4 385 aa12.92□□□□□ -0.34
GABPB1-208ENST00000558970 TSPAN3O60637 253 aa12.92□□□□□ -0.34
GABPB1-208ENST00000558970 ECI2O75521 394 aa12.92□□□□□ -0.34
GABPB1-208ENST00000558970 IGLV3-25P01717 112 aa12.92□□□□□ -0.34
GABPB1-208ENST00000558970 APOEP02649 317 aa12.92□□□□□ -0.34
GABPB1-208ENST00000558970 KLKB1P03952 638 aa12.92□□□□□ -0.34
GABPB1-208ENST00000558970 ARSAP15289 507 aa12.92□□□□□ -0.34
GABPB1-208ENST00000558970 RDXP35241 583 aaKnown RBP12.92□□□□□ -0.34
GABPB1-208ENST00000558970 PTPN9P43378 593 aa12.92□□□□□ -0.34
GABPB1-208ENST00000558970 IFNAR2P48551 515 aa12.92□□□□□ -0.34
GABPB1-208ENST00000558970 HARS2P49590 506 aaKnown RBP12.92□□□□□ -0.34
GABPB1-208ENST00000558970 VAV2P52735 878 aa12.92□□□□□ -0.34
GABPB1-208ENST00000558970 ZNF143P52747 638 aaPredicted RBP12.92□□□□□ -0.34
GABPB1-208ENST00000558970 KRT83P78385 493 aa12.92□□□□□ -0.34
GABPB1-208ENST00000558970 MESDQ14696 234 aa12.92□□□□□ -0.34
GABPB1-208ENST00000558970 C10orf76Q5T2E6 689 aa12.92□□□□□ -0.34
GABPB1-208ENST00000558970 BEND5Q7L4P6 421 aa12.92□□□□□ -0.34
GABPB1-208ENST00000558970 RNF135Q8IUD6 432 aa12.92□□□□□ -0.34
GABPB1-208ENST00000558970 MFSD6LQ8IWD5 586 aa12.92□□□□□ -0.34
GABPB1-208ENST00000558970 RFFLQ8WZ73 363 aa12.92□□□□□ -0.34
GABPB1-208ENST00000558970 PPP1R9BQ96SB3 815 aa12.92□□□□□ -0.34
GABPB1-208ENST00000558970 TRMT61BQ9BVS5 477 aaKnown RBP12.92□□□□□ -0.34
GABPB1-208ENST00000558970 LACRTQ9GZZ8 138 aa12.92□□□□□ -0.34
GABPB1-208ENST00000558970 LINC00597Q9H2U6 94 aa12.92□□□□□ -0.34
GABPB1-208ENST00000558970 GOLPH3Q9H4A6 298 aa12.92□□□□□ -0.34
GABPB1-208ENST00000558970 THG1LQ9NWX6 298 aaKnown RBP12.92□□□□□ -0.34
GABPB1-208ENST00000558970 DUS2Q9NX74 493 aaKnown RBP12.92□□□□□ -0.34
GABPB1-208ENST00000558970 RRN3Q9NYV6 651 aa12.92□□□□□ -0.34
GABPB1-208ENST00000558970 PCSK1NQ9UHG2 260 aa12.92□□□□□ -0.34
GABPB1-208ENST00000558970 SNX10Q9Y5X0 201 aa12.92□□□□□ -0.34
GABPB1-208ENST00000558970 DUSP10Q9Y6W6 482 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms