RNA–Protein interactions for RNA: ENST00000558879.5

LRRC28-210, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4 BASIC

Gene LRRC28, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-210ENST00000558879 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.78■□□□□ 0.44
LRRC28-210ENST00000558879 A0A1W2PQF6 199 aa17.78■□□□□ 0.44
LRRC28-210ENST00000558879 BCLAF3A2AJT9 711 aaKnown RBP17.78■□□□□ 0.44
LRRC28-210ENST00000558879 GTPBP10A4D1E9 387 aaKnown RBP17.78■□□□□ 0.44
LRRC28-210ENST00000558879 LATS1O95835 1130 aa17.78■□□□□ 0.44
LRRC28-210ENST00000558879 IGLV3-27P01718 113 aa17.78■□□□□ 0.44
LRRC28-210ENST00000558879 LCP1P13796 627 aa17.78■□□□□ 0.44
LRRC28-210ENST00000558879 GABRG2P18507 467 aa17.78■□□□□ 0.44
LRRC28-210ENST00000558879 RGS7P49802 495 aa17.78■□□□□ 0.44
LRRC28-210ENST00000558879 MFAP3P55082 362 aa17.78■□□□□ 0.44
LRRC28-210ENST00000558879 SF3A2Q15428 464 aaKnown RBP17.78■□□□□ 0.44
LRRC28-210ENST00000558879 CCDC6Q16204 474 aa17.78■□□□□ 0.44
LRRC28-210ENST00000558879 MLKLQ8NB16 471 aa17.78■□□□□ 0.44
LRRC28-210ENST00000558879 CLEC4CQ8WTT0 213 aa17.78■□□□□ 0.44
LRRC28-210ENST00000558879 EDEM1Q92611 657 aa17.78■□□□□ 0.44
LRRC28-210ENST00000558879 HSFY1Q96LI6 401 aa17.78■□□□□ 0.44
LRRC28-210ENST00000558879 SFMBT1Q9UHJ3 866 aa17.78■□□□□ 0.44
LRRC28-210ENST00000558879 CACNA1EQ15878 2313 aa17.77■□□□□ 0.44
LRRC28-210ENST00000558879 LTFP02788 710 aa17.77■□□□□ 0.44
LRRC28-210ENST00000558879 GBP1P32455 592 aa17.77■□□□□ 0.44
LRRC28-210ENST00000558879 GPD2P43304 727 aa17.77■□□□□ 0.44
LRRC28-210ENST00000558879 MAP7D1Q3KQU3 841 aa17.77■□□□□ 0.44
LRRC28-210ENST00000558879 CLEC17AQ6ZS10 378 aa17.77■□□□□ 0.44
LRRC28-210ENST00000558879 ENOSF1Q7L5Y1 443 aa17.77■□□□□ 0.44
LRRC28-210ENST00000558879 RNF139Q8WU17 664 aa17.77■□□□□ 0.44
LRRC28-210ENST00000558879 HMGB4Q8WW32 186 aa17.77■□□□□ 0.44
LRRC28-210ENST00000558879 PIWIL1Q96J94 861 aaKnown RBP17.77■□□□□ 0.44
LRRC28-210ENST00000558879 VPS45Q9NRW7 570 aa17.77■□□□□ 0.44
LRRC28-210ENST00000558879 RXFP3Q9NSD7 469 aa17.77■□□□□ 0.44
LRRC28-210ENST00000558879 INVSQ9Y283 1065 aa17.77■□□□□ 0.44
LRRC28-210ENST00000558879 ASCC3Q8N3C0 2202 aaKnown RBP17.76■□□□□ 0.43
LRRC28-210ENST00000558879 BECN2A8MW95 431 aa17.76■□□□□ 0.43
LRRC28-210ENST00000558879 PIK3R2O00459 728 aa17.76■□□□□ 0.43
LRRC28-210ENST00000558879 MSI1O43347 362 aaKnown RBP17.76■□□□□ 0.43
LRRC28-210ENST00000558879 FBXO21O94952 628 aa17.76■□□□□ 0.43
LRRC28-210ENST00000558879 HOXD9P28356 352 aaPredicted RBP17.76■□□□□ 0.43
LRRC28-210ENST00000558879 ZNF445P59923 1031 aa17.76■□□□□ 0.43
LRRC28-210ENST00000558879 ENPP2Q13822 863 aa17.76■□□□□ 0.43
LRRC28-210ENST00000558879 GEN1Q17RS7 908 aa17.76■□□□□ 0.43
LRRC28-210ENST00000558879 RNF43Q68DV7 783 aa17.76■□□□□ 0.43
LRRC28-210ENST00000558879 KIAA1211LQ6NV74 962 aa17.76■□□□□ 0.43
LRRC28-210ENST00000558879 CHPFQ8IZ52 775 aa17.76■□□□□ 0.43
LRRC28-210ENST00000558879 RLN3Q8WXF3 142 aa17.76■□□□□ 0.43
LRRC28-210ENST00000558879 SPACA7Q96KW9 195 aa17.76■□□□□ 0.43
LRRC28-210ENST00000558879 SMOC1Q9H4F8 434 aa17.76■□□□□ 0.43
LRRC28-210ENST00000558879 UBE2TQ9NPD8 197 aaPredicted RBP17.76■□□□□ 0.43
LRRC28-210ENST00000558879 BCCIPQ9P287 314 aaKnown RBP eCLIP17.76■□□□□ 0.43
LRRC28-210ENST00000558879 MBD1Q9UIS9 605 aaPredicted RBP17.76■□□□□ 0.43
LRRC28-210ENST00000558879 NCOR2Q9Y618 2525 aa17.76■□□□□ 0.43
LRRC28-210ENST00000558879 DOCK4Q8N1I0 1966 aa17.75■□□□□ 0.43
LRRC28-210ENST00000558879 CYBBP04839 570 aa17.75■□□□□ 0.43
LRRC28-210ENST00000558879 SLC9A1P19634 815 aa17.75■□□□□ 0.43
LRRC28-210ENST00000558879 WASP42768 502 aa17.75■□□□□ 0.43
LRRC28-210ENST00000558879 CREB5Q02930 508 aa17.75■□□□□ 0.43
LRRC28-210ENST00000558879 RING1Q06587 406 aa17.75■□□□□ 0.43
LRRC28-210ENST00000558879 DPCR1Q3MIW9 517 aa17.75■□□□□ 0.43
LRRC28-210ENST00000558879 AASDHQ4L235 1098 aaPredicted RBP17.75■□□□□ 0.43
LRRC28-210ENST00000558879 SMYD5Q6GMV2 418 aa17.75■□□□□ 0.43
LRRC28-210ENST00000558879 GJB7Q6PEY0 223 aa17.75■□□□□ 0.43
LRRC28-210ENST00000558879 ANKS1BQ7Z6G8 1248 aa17.75■□□□□ 0.43
LRRC28-210ENST00000558879 FRMD1Q8N878 549 aa17.75■□□□□ 0.43
LRRC28-210ENST00000558879 C12orf50Q8NA57 414 aaPredicted RBP17.75■□□□□ 0.43
LRRC28-210ENST00000558879 IPO4Q8TEX9 1081 aaKnown RBP17.75■□□□□ 0.43
LRRC28-210ENST00000558879 SHC3Q92529 594 aa17.75■□□□□ 0.43
LRRC28-210ENST00000558879 FAM81BQ96LP2 452 aa17.75■□□□□ 0.43
LRRC28-210ENST00000558879 CRACR2AQ9BSW2 395 aa17.75■□□□□ 0.43
LRRC28-210ENST00000558879 SLC2A11Q9BYW1 496 aa17.75■□□□□ 0.43
LRRC28-210ENST00000558879 CALCOCO1Q9P1Z2 691 aa17.75■□□□□ 0.43
LRRC28-210ENST00000558879 APEX2Q9UBZ4 518 aa17.75■□□□□ 0.43
LRRC28-210ENST00000558879 CLEC4EQ9ULY5 219 aa17.75■□□□□ 0.43
LRRC28-210ENST00000558879 NUMA1Q14980 2115 aa17.74■□□□□ 0.43
LRRC28-210ENST00000558879 NPC1O15118 1278 aa17.74■□□□□ 0.43
LRRC28-210ENST00000558879 FYNP06241 537 aa17.74■□□□□ 0.43
LRRC28-210ENST00000558879 KRT5P13647 590 aa17.74■□□□□ 0.43
LRRC28-210ENST00000558879 NDUFV2P19404 249 aa17.74■□□□□ 0.43
LRRC28-210ENST00000558879 HARS2P49590 506 aaKnown RBP17.74■□□□□ 0.43
LRRC28-210ENST00000558879 APBA1Q02410 837 aa17.74■□□□□ 0.43
LRRC28-210ENST00000558879 NNTQ13423 1086 aa17.74■□□□□ 0.43
LRRC28-210ENST00000558879 EIF4HQ15056 248 aaKnown RBP17.74■□□□□ 0.43
LRRC28-210ENST00000558879 MPPE1Q53F39 396 aa17.74■□□□□ 0.43
LRRC28-210ENST00000558879 TCEAL6Q6IPX3 200 aa17.74■□□□□ 0.43
LRRC28-210ENST00000558879 GBP6Q6ZN66 633 aa17.74■□□□□ 0.43
LRRC28-210ENST00000558879 STK32AQ8WU08 396 aa17.74■□□□□ 0.43
LRRC28-210ENST00000558879 TCEAL3Q969E4 200 aa17.74■□□□□ 0.43
LRRC28-210ENST00000558879 SLC4A5Q9BY07 1137 aa17.74■□□□□ 0.43
LRRC28-210ENST00000558879 THAP9Q9H5L6 903 aa17.74■□□□□ 0.43
LRRC28-210ENST00000558879 SIX2Q9NPC8 291 aa17.74■□□□□ 0.43
LRRC28-210ENST00000558879 ACP6Q9NPH0 428 aa17.74■□□□□ 0.43
LRRC28-210ENST00000558879 CACNA2D2Q9NY47 1150 aa17.74■□□□□ 0.43
LRRC28-210ENST00000558879 THAP10Q9P2Z0 257 aaPredicted RBP17.74■□□□□ 0.43
LRRC28-210ENST00000558879 CYTH4Q9UIA0 394 aa17.74■□□□□ 0.43
LRRC28-210ENST00000558879 MED7O43513 233 aa17.73■□□□□ 0.43
LRRC28-210ENST00000558879 CAVIN2O95810 425 aa17.73■□□□□ 0.43
LRRC28-210ENST00000558879 GNA15P30679 374 aa17.73■□□□□ 0.43
LRRC28-210ENST00000558879 ACADSBP45954 432 aa17.73■□□□□ 0.43
LRRC28-210ENST00000558879 EXOC3L4Q17RC7 722 aa17.73■□□□□ 0.43
LRRC28-210ENST00000558879 FAM133BQ5BKY9 247 aaKnown RBP17.73■□□□□ 0.43
LRRC28-210ENST00000558879 SPDYCQ5MJ68 293 aa17.73■□□□□ 0.43
LRRC28-210ENST00000558879 ADGRF1Q5T601 910 aa17.73■□□□□ 0.43
LRRC28-210ENST00000558879 PEAR1Q5VY43 1037 aaPredicted RBP17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms