RNA–Protein interactions for RNA: ENST00000558735.1

CASC4-205, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 427 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-205ENST00000558735 LRMPQ12912 555 aa12.08□□□□□ -0.48
CASC4-205ENST00000558735 BYSLQ13895 437 aaKnown RBP12.08□□□□□ -0.48
CASC4-205ENST00000558735 DCAF17Q5H9S7 520 aaPredicted RBP12.08□□□□□ -0.48
CASC4-205ENST00000558735 KIAA1211LQ6NV74 962 aa12.08□□□□□ -0.48
CASC4-205ENST00000558735 SLC23A3Q6PIS1 610 aa12.08□□□□□ -0.48
CASC4-205ENST00000558735 LPCAT2Q7L5N7 544 aa12.08□□□□□ -0.48
CASC4-205ENST00000558735 BHLHA9Q7RTU4 235 aa12.08□□□□□ -0.48
CASC4-205ENST00000558735 TRMT11Q7Z4G4 463 aaKnown RBP12.08□□□□□ -0.48
CASC4-205ENST00000558735 TADA2BQ86TJ2 420 aa12.08□□□□□ -0.48
CASC4-205ENST00000558735 SYT12Q8IV01 421 aa12.08□□□□□ -0.48
CASC4-205ENST00000558735 CHPFQ8IZ52 775 aa12.08□□□□□ -0.48
CASC4-205ENST00000558735 UBR7Q8N806 425 aa12.08□□□□□ -0.48
CASC4-205ENST00000558735 UBA3Q8TBC4 463 aa12.08□□□□□ -0.48
CASC4-205ENST00000558735 NUSAP1Q9BXS6 441 aaKnown RBP12.08□□□□□ -0.48
CASC4-205ENST00000558735 MARCH2Q9P0N8 246 aa12.08□□□□□ -0.48
CASC4-205ENST00000558735 RASAL2Q9UJF2 1139 aa12.08□□□□□ -0.48
CASC4-205ENST00000558735 KLK13Q9UKR3 277 aa12.08□□□□□ -0.48
CASC4-205ENST00000558735 AGO1Q9UL18 857 aaKnown RBP12.08□□□□□ -0.48
CASC4-205ENST00000558735 ZNF510Q9Y2H8 683 aa12.08□□□□□ -0.48
CASC4-205ENST00000558735 ASCC3Q8N3C0 2202 aaKnown RBP12.08□□□□□ -0.48
CASC4-205ENST00000558735 PPP1R3GB7ZBB8 358 aa12.07□□□□□ -0.48
CASC4-205ENST00000558735 RNF225M0QZC1 329 aaPredicted RBP12.07□□□□□ -0.48
CASC4-205ENST00000558735 XPO1O14980 1071 aaKnown RBP12.07□□□□□ -0.48
CASC4-205ENST00000558735 GABBR2O75899 941 aa12.07□□□□□ -0.48
CASC4-205ENST00000558735 ZBED1O96006 694 aa12.07□□□□□ -0.48
CASC4-205ENST00000558735 PENKP01210 267 aaPredicted RBP12.07□□□□□ -0.48
CASC4-205ENST00000558735 BMP6P22004 513 aa12.07□□□□□ -0.48
CASC4-205ENST00000558735 CHKAP35790 457 aa12.07□□□□□ -0.48
CASC4-205ENST00000558735 BECN1Q14457 450 aa12.07□□□□□ -0.48
CASC4-205ENST00000558735 CACNA1EQ15878 2313 aa12.07□□□□□ -0.48
CASC4-205ENST00000558735 PKDCCQ504Y2 493 aa12.07□□□□□ -0.48
CASC4-205ENST00000558735 SGO2Q562F6 1265 aa12.07□□□□□ -0.48
CASC4-205ENST00000558735 TRIM61Q5EBN2 209 aa12.07□□□□□ -0.48
CASC4-205ENST00000558735 FYB2Q5VWT5 728 aa12.07□□□□□ -0.48
CASC4-205ENST00000558735 SDE2Q6IQ49 451 aa12.07□□□□□ -0.48
CASC4-205ENST00000558735 PROSER1Q86XN7 944 aa12.07□□□□□ -0.48
CASC4-205ENST00000558735 DENND1CQ8IV53 801 aa12.07□□□□□ -0.48
CASC4-205ENST00000558735 ELOA2Q8IYF1 753 aaPredicted RBP12.07□□□□□ -0.48
CASC4-205ENST00000558735 ARHGAP18Q8N392 663 aa12.07□□□□□ -0.48
CASC4-205ENST00000558735 DEFB119Q8N690 84 aa12.07□□□□□ -0.48
CASC4-205ENST00000558735 LMO3Q8TAP4 145 aa12.07□□□□□ -0.48
CASC4-205ENST00000558735 IPO4Q8TEX9 1081 aaKnown RBP12.07□□□□□ -0.48
CASC4-205ENST00000558735 ERLEC1Q96DZ1 483 aa12.07□□□□□ -0.48
CASC4-205ENST00000558735 DHTKD1Q96HY7 919 aaPredicted RBP12.07□□□□□ -0.48
CASC4-205ENST00000558735 SPACA7Q96KW9 195 aa12.07□□□□□ -0.48
CASC4-205ENST00000558735 CDK5RAP1Q96SZ6 601 aaKnown RBP12.07□□□□□ -0.48
CASC4-205ENST00000558735 GABRG3Q99928 467 aa12.07□□□□□ -0.48
CASC4-205ENST00000558735 GTPBP4Q9BZE4 634 aaKnown RBP12.07□□□□□ -0.48
CASC4-205ENST00000558735 ULBP1Q9BZM6 244 aa12.07□□□□□ -0.48
CASC4-205ENST00000558735 DCLK3Q9C098 648 aa12.07□□□□□ -0.48
CASC4-205ENST00000558735 MAN1B1Q9UKM7 699 aa12.07□□□□□ -0.48
CASC4-205ENST00000558735 TSPAN16Q9UKR8 245 aa12.07□□□□□ -0.48
CASC4-205ENST00000558735 KIAA1257Q9ULG3 409 aa12.07□□□□□ -0.48
CASC4-205ENST00000558735 CLEC4EQ9ULY5 219 aa12.07□□□□□ -0.48
CASC4-205ENST00000558735 SLC27A6Q9Y2P4 619 aa12.07□□□□□ -0.48
CASC4-205ENST00000558735 ASH1LQ9NR48 2969 aaKnown RBP12.06□□□□□ -0.48
CASC4-205ENST00000558735 SLC12A8A0AV02 714 aa12.06□□□□□ -0.48
CASC4-205ENST00000558735 GFRA2O00451 464 aa12.06□□□□□ -0.48
CASC4-205ENST00000558735 PMM2O15305 246 aa12.06□□□□□ -0.48
CASC4-205ENST00000558735 VDRP11473 427 aa12.06□□□□□ -0.48
CASC4-205ENST00000558735 ENGP17813 658 aa12.06□□□□□ -0.48
CASC4-205ENST00000558735 NDUFV2P19404 249 aa12.06□□□□□ -0.48
CASC4-205ENST00000558735 ITPKAP23677 461 aa12.06□□□□□ -0.48
CASC4-205ENST00000558735 CORO1AP31146 461 aaKnown RBP12.06□□□□□ -0.48
CASC4-205ENST00000558735 FMO5P49326 533 aa12.06□□□□□ -0.48
CASC4-205ENST00000558735 SLC8A3P57103 927 aa12.06□□□□□ -0.48
CASC4-205ENST00000558735 SIM1P81133 766 aaPredicted RBP12.06□□□□□ -0.48
CASC4-205ENST00000558735 HNRNPDQ14103 355 aaKnown RBP12.06□□□□□ -0.48
CASC4-205ENST00000558735 TRIP4Q15650 581 aaPredicted RBP12.06□□□□□ -0.48
CASC4-205ENST00000558735 GEN1Q17RS7 908 aa12.06□□□□□ -0.48
CASC4-205ENST00000558735 GOLGA7BQ2TAP0 167 aa12.06□□□□□ -0.48
CASC4-205ENST00000558735 UAP1L1Q3KQV9 507 aa12.06□□□□□ -0.48
CASC4-205ENST00000558735 BSPRYQ5W0U4 402 aa12.06□□□□□ -0.48
CASC4-205ENST00000558735 ARMCX6Q7L4S7 300 aa12.06□□□□□ -0.48
CASC4-205ENST00000558735 RAB44Q7Z6P3 723 aaPredicted RBP12.06□□□□□ -0.48
CASC4-205ENST00000558735 SLC35F5Q8WV83 523 aa12.06□□□□□ -0.48
CASC4-205ENST00000558735 TFAP2BQ92481 460 aa12.06□□□□□ -0.48
CASC4-205ENST00000558735 PIWIL1Q96J94 861 aaKnown RBP12.06□□□□□ -0.48
CASC4-205ENST00000558735 ZSWIM1Q9BR11 485 aa12.06□□□□□ -0.48
CASC4-205ENST00000558735 SLC6A17Q9H1V8 727 aa12.06□□□□□ -0.48
CASC4-205ENST00000558735 METTL14Q9HCE5 456 aaKnown RBP12.06□□□□□ -0.48
CASC4-205ENST00000558735 CACNA2D2Q9NY47 1150 aa12.06□□□□□ -0.48
CASC4-205ENST00000558735 CALCOCO1Q9P1Z2 691 aa12.06□□□□□ -0.48
CASC4-205ENST00000558735 PILRBQ9UKJ0 227 aa12.06□□□□□ -0.48
CASC4-205ENST00000558735 GPSM3Q9Y4H4 160 aa12.06□□□□□ -0.48
CASC4-205ENST00000558735 RAD54BQ9Y620 910 aa12.06□□□□□ -0.48
CASC4-205ENST00000558735 IGHV1OR15-9A0A0B4J2B8 117 aa12.05□□□□□ -0.48
CASC4-205ENST00000558735 YJEFN3A6XGL0 299 aa12.05□□□□□ -0.48
CASC4-205ENST00000558735 E7ENQ6 273 aa12.05□□□□□ -0.48
CASC4-205ENST00000558735 O00370 1275 aa12.05□□□□□ -0.48
CASC4-205ENST00000558735 PSMA7O14818 248 aa12.05□□□□□ -0.48
CASC4-205ENST00000558735 CD19P15391 556 aa12.05□□□□□ -0.48
CASC4-205ENST00000558735 RDXP35241 583 aaKnown RBP12.05□□□□□ -0.48
CASC4-205ENST00000558735 BCAT1P54687 386 aa12.05□□□□□ -0.48
CASC4-205ENST00000558735 MFAP3P55082 362 aa12.05□□□□□ -0.48
CASC4-205ENST00000558735 YWHAEP62258 255 aaKnown RBP12.05□□□□□ -0.48
CASC4-205ENST00000558735 BST2Q10589 180 aaKnown RBP12.05□□□□□ -0.48
CASC4-205ENST00000558735 ZNF423Q2M1K9 1284 aa12.05□□□□□ -0.48
CASC4-205ENST00000558735 TTI2Q6NXR4 508 aa12.05□□□□□ -0.48
CASC4-205ENST00000558735 LCLAT1Q6UWP7 414 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms